Files
Castor/han/__main__.py
T
Achyudh Ram cc275f6bde Add CharacterCNN for Document Classification (#155)
* Add ReutersTrainer, ReutersEvaluator options in Factory classes

* Add Reuters to Kim-CNN command line arguments

* Fix SST dataset path according to changes in Kim-CNN args

The dataset path in args.py was made to point at the dataset folder rather than dataset/SST folder. Hence SST folder was added to paths in the SST dataset class

* Add Reuters dataset class, and support in __main__

* Add Reuters dataset trainers and evaluators

* Remove debug print statement in reuters_evaluator

* Fix rounding bug in reuters_trainer and reuters_evaluator

* Add LSTM for baseline text classification measurements

* Add eval metrics for lstm_baseline

* Set batch_first param in lstm_baseline

* Remove onnx args from lstm_baseline

* Pack padded sequences in LSTM_baseline

* Add TensorBoardX support for Reuters trainer

* Add Arxiv Academic Paper Dataset (AAPD)

* Add Hidden Bottleneck Layer to BiLSTM

* Fix packing of padded tensors in Reuters

* Add cmdline args for Hidden Bottleneck Layer for BiLSTM

* Include pre-padding lengths in AAPD dataset

* Remove duplication of preprocessing code in AAPD

* Remove batch_size condition in ReutersTrainer

* Add ignore_lengths option to ReutersTrainer and ReutersEvaluator

* Add AAPDCharQuantized and ReutersCharQuantized

* Rename Reuters_hierarchical to ReutersHierarchical

* Add CharacterCNN for document classification

* Update README.md for CharacterCNN

* Fix table in README.md for CharacterCNN

* Add AAPDHierarchical for HAN

* Update HAN for changes in Reuters dataset endpoints

* Fix bug in CharCNN when running on CPU
2018-10-28 19:01:54 -04:00

205 lines
9.8 KiB
Python

from copy import deepcopy
import logging
import random
from sklearn import metrics
import numpy as np
import torch
import torch.onnx
from common.evaluation import EvaluatorFactory
from common.train import TrainerFactory
from datasets.sst import SST1
from datasets.sst import SST2
from datasets.reuters import ReutersHierarchical as Reuters
from datasets.aapd import AAPDHierarchical as AAPD
from han.args import get_args
from han.model import HAN
import torch.nn.functional as F
class UnknownWordVecCache(object):
"""
Caches the first randomly generated word vector for a certain size to make it is reused.
"""
cache = {}
@classmethod
def unk(cls, tensor):
size_tup = tuple(tensor.size())
if size_tup not in cls.cache:
cls.cache[size_tup] = torch.Tensor(tensor.size())
# choose 0.25 so unknown vectors have approximately same variance as pre-trained ones
# same as original implementation: https://github.com/yoonkim/CNN_sentence/blob/0a626a048757d5272a7e8ccede256a434a6529be/process_data.py#L95
cls.cache[size_tup].uniform_(-0.25, 0.25)
return cls.cache[size_tup]
def get_logger():
logger = logging.getLogger(__name__)
logger.setLevel(logging.INFO)
ch = logging.StreamHandler()
ch.setLevel(logging.DEBUG)
formatter = logging.Formatter('%(levelname)s - %(message)s')
ch.setFormatter(formatter)
logger.addHandler(ch)
return logger
def evaluate_dataset(split_name, dataset_cls, model, embedding, loader, batch_size, device):
saved_model_evaluator = EvaluatorFactory.get_evaluator(dataset_cls, model, embedding, loader, batch_size, device)
saved_model_evaluator.ignore_lengths = True
scores, metric_names = saved_model_evaluator.get_scores()
logger.info('Evaluation metrics for {}'.format(split_name))
logger.info('\t'.join([' '] + metric_names))
logger.info('\t'.join([split_name] + list(map(str, scores))))
if __name__ == '__main__':
# Set default configuration in : args.py
args = get_args()
# Set random seed for reproducibility
torch.manual_seed(args.seed)
torch.backends.cudnn.deterministic = True
if not args.cuda:
args.gpu = -1
if torch.cuda.is_available() and args.cuda:
print('Note: You are using GPU for training')
torch.cuda.set_device(args.gpu)
torch.cuda.manual_seed(args.seed)
if torch.cuda.is_available() and not args.cuda:
print('Warning: You have Cuda but not use it. You are using CPU for training.')
np.random.seed(args.seed)
random.seed(args.seed)
logger = get_logger()
# Set up the data for training SST-1
if args.dataset == 'SST-1':
train_iter, dev_iter, test_iter = SST1.iters(args.data_dir, args.word_vectors_file, args.word_vectors_dir, batch_size=args.batch_size, device=args.gpu, unk_init=UnknownWordVecCache.unk)
# Set up the data for training SST-2
elif args.dataset == 'SST-2':
train_iter, dev_iter, test_iter = SST2.iters(args.data_dir, args.word_vectors_file, args.word_vectors_dir, batch_size=args.batch_size, device=args.gpu, unk_init=UnknownWordVecCache.unk)
elif args.dataset == 'Reuters':
train_iter, dev_iter, test_iter = Reuters.iters(args.data_dir, args.word_vectors_file, args.word_vectors_dir, batch_size=args.batch_size, device=args.gpu, unk_init=UnknownWordVecCache.unk)
elif args.dataset == 'AAPD':
train_iter, dev_iter, test_iter = AAPD.iters(args.data_dir, args.word_vectors_file, args.word_vectors_dir, batch_size=args.batch_size, device=args.gpu, unk_init=UnknownWordVecCache.unk)
else:
raise ValueError('Unrecognized dataset')
config = deepcopy(args)
config.dataset = train_iter.dataset
config.target_class = train_iter.dataset.NUM_CLASSES
config.words_num = len(train_iter.dataset.TEXT_FIELD.vocab)
print('Dataset {} Mode {}'.format(args.dataset, args.mode))
print('VOCAB num',len(train_iter.dataset.TEXT_FIELD.vocab))
print('LABEL.target_class:', train_iter.dataset.NUM_CLASSES)
print('Train instance', len(train_iter.dataset))
print('Dev instance', len(dev_iter.dataset))
print('Test instance', len(test_iter.dataset))
if args.resume_snapshot:
if args.cuda:
model = torch.load(args.resume_snapshot, map_location=lambda storage, location: storage.cuda(args.gpu))
else:
model = torch.load(args.resume_snapshot, map_location=lambda storage, location: storage)
else:
model = HAN(config)
if args.cuda:
model.cuda()
print('Shift model to GPU')
parameter = filter(lambda p: p.requires_grad, model.parameters())
print(parameter)
#optimizer = torch.optim.Adadelta(parameter, lr=args.lr, weight_decay=args.weight_decay)
#optimizer = torch.optim.SGD(parameter, lr = args.lr, momentum = 0.9)
optimizer = torch.optim.Adam(parameter, lr = args.lr)
if args.dataset == 'SST-1':
train_evaluator = EvaluatorFactory.get_evaluator(SST1, model, None, train_iter, args.batch_size, args.gpu)
test_evaluator = EvaluatorFactory.get_evaluator(SST1, model, None, test_iter, args.batch_size, args.gpu)
dev_evaluator = EvaluatorFactory.get_evaluator(SST1, model, None, dev_iter, args.batch_size, args.gpu)
elif args.dataset == 'SST-2':
train_evaluator = EvaluatorFactory.get_evaluator(SST2, model, None, train_iter, args.batch_size, args.gpu)
test_evaluator = EvaluatorFactory.get_evaluator(SST2, model, None, test_iter, args.batch_size, args.gpu)
dev_evaluator = EvaluatorFactory.get_evaluator(SST2, model, None, dev_iter, args.batch_size, args.gpu)
elif args.dataset == 'Reuters':
train_evaluator = EvaluatorFactory.get_evaluator(Reuters, model, None, train_iter, args.batch_size, args.gpu)
test_evaluator = EvaluatorFactory.get_evaluator(Reuters, model, None, test_iter, args.batch_size, args.gpu)
dev_evaluator = EvaluatorFactory.get_evaluator(Reuters, model, None, dev_iter, args.batch_size, args.gpu)
elif args.dataset == 'AAPD':
train_evaluator = EvaluatorFactory.get_evaluator(AAPD, model, None, train_iter, args.batch_size, args.gpu)
test_evaluator = EvaluatorFactory.get_evaluator(AAPD, model, None, test_iter, args.batch_size, args.gpu)
dev_evaluator = EvaluatorFactory.get_evaluator(AAPD, model, None, dev_iter, args.batch_size, args.gpu)
else:
raise ValueError('Unrecognized dataset')
dev_evaluator.ignore_lengths = True
test_evaluator.ignore_lengths = True
trainer_config = {
'optimizer': optimizer,
'batch_size': args.batch_size,
'log_interval': args.log_every,
'dev_log_interval': args.dev_every,
'patience': args.patience,
'model_outfile': args.save_path, # actually a directory, using model_outfile to conform to Trainer naming convention
'logger': logger,
'ignore_lengths': True
}
trainer = TrainerFactory.get_trainer(args.dataset, model, None, train_iter, trainer_config, train_evaluator, test_evaluator, dev_evaluator)
if not args.trained_model:
trainer.train(args.epochs)
else:
if args.cuda:
model = torch.load(args.trained_model, map_location=lambda storage, location: storage.cuda(args.gpu))
else:
model = torch.load(args.trained_model, map_location=lambda storage, location: storage)
if args.dataset == 'SST-1':
evaluate_dataset('dev', SST1, model, None, dev_iter, args.batch_size, args.gpu)
evaluate_dataset('test', SST1, model, None, test_iter, args.batch_size, args.gpu)
elif args.dataset == 'SST-2':
evaluate_dataset('dev', SST2, model, None, dev_iter, args.batch_size, args.gpu)
evaluate_dataset('test', SST2, model, None, test_iter, args.batch_size, args.gpu)
elif args.dataset == 'Reuters':
evaluate_dataset('dev', Reuters, model, None, dev_iter, args.batch_size, args.gpu)
evaluate_dataset('test', Reuters, model, None, test_iter, args.batch_size, args.gpu)
elif args.dataset == 'AAPD':
train_evaluator = EvaluatorFactory.get_evaluator(AAPD, model, None, train_iter, args.batch_size, args.gpu)
test_evaluator = EvaluatorFactory.get_evaluator(AAPD, model, None, test_iter, args.batch_size, args.gpu)
dev_evaluator = EvaluatorFactory.get_evaluator(AAPD, model, None, dev_iter, args.batch_size, args.gpu)
else:
raise ValueError('Unrecognized dataset')
# Calculate dev and test metrics
for data_loader in [dev_iter, test_iter]:
predicted_labels = list()
target_labels = list()
for batch_idx, batch in enumerate(data_loader):
scores_rounded = F.sigmoid(model(batch.text)).round().long()
predicted_labels.extend(scores_rounded.cpu().detach().numpy())
target_labels.extend(batch.label.cpu().detach().numpy())
predicted_labels = np.array(predicted_labels)
target_labels = np.array(target_labels)
accuracy = metrics.accuracy_score(target_labels, predicted_labels)
precision = metrics.precision_score(target_labels, predicted_labels, average='micro')
recall = metrics.recall_score(target_labels, predicted_labels, average='micro')
f1 = metrics.f1_score(target_labels, predicted_labels, average='micro')
if data_loader == dev_iter:
print("Dev metrics:")
else:
print("Test metrics:")
print(accuracy, precision, recall, f1)
if args.onnx:
device = torch.device('cuda') if torch.cuda.is_available() and args.cuda else torch.device('cpu')
dummy_input = torch.zeros(args.onnx_batch_size, args.onnx_sent_len, dtype=torch.long, device=device)
onnx_filename = 'han_{}.onnx'.format(args.mode)
torch.onnx.export(model, dummy_input, onnx_filename)
print('Exported model in ONNX format as {}'.format(onnx_filename))