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https://github.com/wassname/DeepTime.git
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# import gin
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import torch
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import torch.nn as nn
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from torch import Tensor
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from einops import rearrange, repeat, reduce
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from tsai.models.InceptionTimePlus import (
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Conv,
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noop,
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nn,
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LinBnDrop,
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GAP1d,
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torch,
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AddCoords1d, BatchNorm
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)
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from tsai.models.TSTPlus import TSTPlus
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from tsai.models.TSPerceiver import TSPerceiver
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from tsai.models.TSSequencerPlus import TSSequencerPlus
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from torch.nn.utils import weight_norm, spectral_norm
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from .causalinception import CausalInceptionTimePlus
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from .inr import INR
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def custom_head(head_nf, c_out, seq_len):
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return nn.Sequential(
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# AddCoords1d(),
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# Conv(head_nf+1, head_nf, 2, bias=True, norm='Spectral'),
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# nn.BatchNorm1d(head_nf),
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# # nn.Dropout(0.15),
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# nn.ReLU(),
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AddCoords1d(),
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Conv(head_nf + 1, c_out, 1, bias=False, norm="Spectral"),
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)
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class LinBnDropSN(nn.Sequential):
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"Module grouping `BatchNorm1d`, `Dropout` and `Linear` layers"
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def __init__(self, n_in, n_out, bn=True, p=0., act=None, lin_first=False, norm=None):
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layers = [BatchNorm(n_out if lin_first else n_in, ndim=1)] if bn else []
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if p != 0: layers.append(nn.Dropout(p))
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lin = [spectral_norm(nn.Linear(n_in, n_out, bias=not bn))]
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if act is not None: lin.append(act)
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layers = lin+layers if lin_first else layers+lin
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super().__init__(*layers)
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class InceptionEncoder(nn.Module):
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def __init__(self, c_in, c_out, *args, **kwargs):
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super().__init__()
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self.net = CausalInceptionTimePlus(
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c_in=c_in, c_out=c_out, custom_head=custom_head, *args, **kwargs
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)
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bn = kwargs.get("bn", True)
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fc_dropout = kwargs.get("fc_dropout", 0.15)
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self.pool = nn.Sequential(
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# GACP1d(1),
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# LinBnDrop(c_out*2, c_out, bn=bn, p=dropout)
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GAP1d(1),
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LinBnDropSN(c_out, c_out, bn=bn, p=fc_dropout),
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)
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self.head = nn.Sequential(
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# just to make sure we get a spectral norm final layer (after cat)
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LinBnDropSN(c_out*2, c_out*2, bn=bn, p=fc_dropout),
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)
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def forward(self, x):
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"""
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Takes in a sequence of shape (batch, sequence, features)
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and outputs a representation of shape (batch, features)
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"""
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outs = self.net(x.permute(0, 2, 1)) # .permute(0, 2, 1)
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last = outs[:, :, -1] # take last
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max = self.pool(outs)
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return self.head(torch.cat([max, last], 1))
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class TransformerEncoder(nn.Module):
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def __init__(
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self,
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c_in,
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c_out,
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seq_len,
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layers=3,
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layer_size=512,
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dropout=0.1,
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n_heads=4,
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conv_dropout=0,
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*args,
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**kwargs,
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):
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super().__init__()
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# d_model (82) must be divisible by n_heads (4)
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layer_size = layer_size // n_heads * n_heads
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d_model = layer_size // 2
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self.net = TSTPlus(
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c_in=c_in,
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c_out=c_out,
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seq_len=seq_len,
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d_model=d_model,
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n_heads=n_heads,
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d_k=d_model // n_heads,
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d_v=d_model // n_heads,
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d_ff=layer_size,
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n_layers=layers,
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dropout=conv_dropout,
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fc_dropout=dropout,
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flatten=False,
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# *args, **kwargs
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)
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def forward(self, x):
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"""
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Takes in a sequence of shape (batch, sequence, features)
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and outputs a representation of shape (batch, features)
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"""
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outs = self.net(x.permute(0, 2, 1))
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return outs
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class TransformerEncoder2(nn.Module):
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def __init__(
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self,
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c_in,
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c_out,
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seq_len,
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layers=3,
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layer_size=512,
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dropout=0.1,
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n_heads=4,
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conv_dropout=0,
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*args,
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**kwargs,
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):
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super().__init__()
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# d_model (82) must be divisible by n_heads (4)
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layer_size = layer_size // n_heads * n_heads
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d_model = layer_size // 2
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self.net = TSPerceiver(
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c_in=c_in,
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c_out=c_out,
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seq_len=seq_len,
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# cat_szs=0, n_cont=0,
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n_latents=layer_size, d_latent=layer_size//4,
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# d_context=None,
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self_per_cross_attn=1,
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# share_weights=True, cross_n_heads=1, d_head=None,
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# d_model=d_model,
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# d_k=d_model // n_heads,
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# d_v=d_model // n_heads,
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# d_ff=layer_size,
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self_n_heads=n_heads,
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n_layers=layers,
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attn_dropout=conv_dropout,
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fc_dropout=dropout,
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)
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def forward(self, x):
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"""
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Takes in a sequence of shape (batch, sequence, features)
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and outputs a representation of shape (batch, features)
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"""
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outs = self.net(x.permute(0, 2, 1))
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return outs
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class LSTMEncoder(nn.Module):
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def __init__(
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self,
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c_in,
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c_out,
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dropout=0.1,
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conv_dropout=0,
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layers=1,
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layer_size=100,
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*args,
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**kwargs,
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):
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super().__init__()
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self.rnn = nn.LSTM(
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c_in,
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layer_size,
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num_layers=layers,
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bias=True,
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batch_first=True,
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dropout=conv_dropout,
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bidirectional=False,
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)
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self.dropout = nn.Dropout(dropout) if dropout else noop
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self.fc = nn.Linear(layer_size * (1 + 0), c_out)
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def forward(self, x):
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"""
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Takes in a sequence of shape (batch, sequence, features)
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and outputs a representation of shape (batch, features)
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"""
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# x = x.transpose(2,1) # [batch_size x n_vars x seq_len] --> [batch_size x seq_len x n_vars]
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output, _ = self.rnn(
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x
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) # output from all sequence steps: [batch_size x seq_len x hidden_size * (1 + bidirectional)]
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output = output[
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:, -1
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] # output from last sequence step : [batch_size x hidden_size * (1 + bidirectional)]
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return self.fc(self.dropout(output))
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class LSTMEncoder2(nn.Module):
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def __init__(
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self,
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c_in,
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c_out,
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seq_len,
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dropout=0.1,
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conv_dropout=0,
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layers=1,
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layer_size=100,
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*args,
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**kwargs,
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):
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super().__init__()
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self.rnn = TSSequencerPlus(
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c_in=c_in,
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c_out=c_out,
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seq_len=seq_len,
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d_model=layer_size,
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depth=layers,
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lstm_dropout=conv_dropout,
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fc_dropout=dropout,
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pre_norm=False, use_token=True, use_pe=True,
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use_bn=False,
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)
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def forward(self, x):
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"""
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Takes in a sequence of shape (batch, sequence, features)
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and outputs a representation of shape (batch, features)
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"""
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return self.rnn(
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x.transpose(2, 1)
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)
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class MLPEncoder(nn.Module):
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def __init__(
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self,
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c_in,
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c_out,
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scales=[0.01, 0.1, 1, 5, 10, 20, 50, 100],
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n_fourier_feats=4096,
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layers=2,
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layer_size=32,
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*args,
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**kwargs,
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):
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super().__init__()
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self.net = INR(
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in_feats=c_in,
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scales=scales,
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n_fourier_feats=n_fourier_feats,
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layers=layers,
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layer_size=layer_size,
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)
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def forward(self, x):
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"""
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Takes in a sequence of shape (batch, sequence, features)
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and outputs a representation of shape (batch, features)
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"""
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return self.net(x)[:, -1]
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@@ -0,0 +1,79 @@
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import torch
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import torch.nn as nn
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import torch.nn.functional as F
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from models.modules.regressors import RidgeRegressor
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from models.modules.inr import INR, INRLayer
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class SumHead(nn.Module):
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def __init__(self, d, c_out=1, ):
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super().__init__()
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self.l = nn.Linear(d, c_out) # init a random transform
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def forward(self, query, support, support_labels):
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return self.l(query)
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class TransformerHead(nn.Module):
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def __init__(self, d, c_out=1, dropout=0.1, num_heads=16):
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super().__init__()
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if d<64:
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num_heads = 4
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d = d//num_heads*num_heads # make sure it's divisable
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hidden_dim = d//4
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# the value is just one class, so let's embed it first
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self.value_encoder = nn.Sequential(
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INRLayer(c_out, hidden_dim, dropout=0),
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nn.Linear(hidden_dim, hidden_dim)
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)
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self.l = nn.MultiheadAttention(embed_dim=d, num_heads=num_heads, batch_first=True, kdim=d, vdim=hidden_dim, add_bias_kv=True, bias=True)
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# after using attention let's decode it
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self.decoder = nn.Sequential(
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INRLayer(d, d, dropout=dropout),
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nn.Linear(d, c_out)
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)
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def forward(self, query, support, support_labels, *args, **kwargs):
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"""
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Fits the support set with ridge regression and
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returns the classification score on the query set.
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Parameters:
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query: a (tasks_per_batch, n_query, d) Tensor.
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support: a (tasks_per_batch, n_support, d) Tensor.
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support_labels: a (tasks_per_batch, n_support) Tensor.
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n_way: a scalar. Represents the number of classes in a few-shot classification task.
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n_shot: a scalar. Represents the number of support examples given per class.
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lambda_reg: a scalar. Represents the strength of L2 regularization.
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Returns: a (tasks_per_batch, n_query, n_way) Tensor.
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"""
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# should be (batch, seq, feature)
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value = self.value_encoder(support_labels)
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attn_output, _ = self.l(query=query, key=support, value=value)
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o = self.decoder(attn_output)
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return o
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class RegressionHead(nn.Module):
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def __init__(self, base_learner='Ridge', d=512, enable_scale=True, dropout=0.1, num_heads=16):
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super().__init__()
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if ('Ridge' in base_learner):
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# the regular DeepTime one
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self.head = RidgeRegressor()
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elif ("None" in base_learner):
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self.head = SumHead(d=d)
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elif ("Transformer" in base_learner):
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self.head = TransformerHead(d=d, dropout=dropout, num_heads=num_heads)
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else:
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raise NotImplementedError(base_learner)
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# Add a learnable scale
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self.enable_scale = enable_scale
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self.scale = nn.Parameter(torch.FloatTensor([1.0]))
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def forward(self, query, support, support_labels, **kwargs):
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if self.enable_scale:
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return self.scale * self.head(query, support, support_labels, **kwargs)
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else:
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return self.head(query, support, support_labels, **kwargs)
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@@ -9,6 +9,7 @@ import torch
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from torch import Tensor
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from torch import nn
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import torch.nn.functional as F
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from einops import rearrange, repeat, reduce
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class RidgeRegressor(nn.Module):
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@@ -16,11 +17,15 @@ class RidgeRegressor(nn.Module):
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super().__init__()
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self._lambda = nn.Parameter(torch.as_tensor(lambda_init, dtype=torch.float))
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def forward(self, reprs: Tensor, x: Tensor, reg_coeff: Optional[float] = None) -> Tensor:
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def forward(self, query_reprs:Tensor, context_reprs: Tensor, context_y: Tensor, reg_coeff: Optional[float] = None) -> Tensor:
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if reg_coeff is None:
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reg_coeff = self.reg_coeff()
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w, b = self.get_weights(reprs, x, reg_coeff)
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return w, b
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w, b = self.get_weights(context_reprs, context_y, reg_coeff)
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preds = self.forecast(query_reprs, w, b)
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return preds
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def forecast(self, inp: Tensor, w: Tensor, b: Tensor) -> Tensor:
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return torch.einsum('... d o, ... t d -> ... t o', [w, inp]) + b
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def get_weights(self, X: Tensor, Y: Tensor, reg_coeff: float) -> Tensor:
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batch_size, n_samples, n_dim = X.shape
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