Files
catalyst/zipline/utils/input_validation.py
T
Scott Sanderson bd0f138081 TEST/MAINT: Refactor unique axis verification.
Break it into a standalone function that handles any pandas type.
2016-05-05 14:20:47 -04:00

530 lines
15 KiB
Python

# Copyright 2015 Quantopian, Inc.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from datetime import tzinfo
from functools import partial, wraps
from operator import attrgetter
from numpy import dtype
import pandas as pd
from pytz import timezone
from six import iteritems, string_types, PY3
from toolz import valmap, complement, compose
import toolz.curried.operator as op
from zipline.utils.preprocess import preprocess
def verify_indices_all_unique(obj):
"""
Check that all axes of a pandas object are unique.
Parameters
----------
obj : pd.Series / pd.DataFrame / pd.Panel
The object to validate.
Returns
-------
None
Raises
------
ValueError
If any axis has duplicate entries.
"""
axis_names = [
('index',), # Series
('index', 'columns'), # DataFrame
('items', 'major_axis', 'minor_axis') # Panel
][obj.ndim - 1] # ndim = 1 should go to entry 0,
for axis_name, index in zip(axis_names, obj.axes):
if index.is_unique:
continue
raise ValueError(
"Duplicate entries in {type}.{axis}: {dupes}.".format(
type=type(obj).__name__,
axis=axis_name,
dupes=sorted(index[index.duplicated()]),
)
)
def optionally(preprocessor):
"""Modify a preprocessor to explicitly allow `None`.
Parameters
----------
preprocessor : callable[callable, str, any -> any]
A preprocessor to delegate to when `arg is not None`.
Returns
-------
optional_preprocessor : callable[callable, str, any -> any]
A preprocessor that delegates to `preprocessor` when `arg is not None`.
Usage
-----
>>> def preprocessor(func, argname, arg):
... if not isinstance(arg, int):
... raise TypeError('arg must be int')
... return arg
...
>>> @preprocess(a=optionally(preprocessor))
... def f(a):
... return a
...
>>> f(1) # call with int
1
>>> f('a') # call with not int
Traceback (most recent call last):
...
TypeError: arg must be int
>>> f(None) is None # call with explicit None
True
"""
@wraps(preprocessor)
def wrapper(func, argname, arg):
return arg if arg is None else preprocessor(func, argname, arg)
return wrapper
def ensure_upper_case(func, argname, arg):
if isinstance(arg, string_types):
return arg.upper()
else:
raise TypeError(
"{0}() expected argument '{1}' to"
" be a string, but got {2} instead.".format(
func.__name__,
argname,
arg,
),
)
def ensure_dtype(func, argname, arg):
"""
Argument preprocessor that converts the input into a numpy dtype.
Usage
-----
>>> import numpy as np
>>> from zipline.utils.preprocess import preprocess
>>> @preprocess(dtype=ensure_dtype)
... def foo(dtype):
... return dtype
...
>>> foo(float)
dtype('float64')
"""
try:
return dtype(arg)
except TypeError:
raise TypeError(
"{func}() couldn't convert argument "
"{argname}={arg!r} to a numpy dtype.".format(
func=_qualified_name(func),
argname=argname,
arg=arg,
),
)
def ensure_timezone(func, argname, arg):
"""Argument preprocessor that converts the input into a tzinfo object.
Usage
-----
>>> from zipline.utils.preprocess import preprocess
>>> @preprocess(tz=ensure_timezone)
... def foo(tz):
... return tz
>>> foo('utc')
<UTC>
"""
if isinstance(arg, tzinfo):
return arg
if isinstance(arg, string_types):
return timezone(arg)
raise TypeError(
"{func}() couldn't convert argument "
"{argname}={arg!r} to a timezone.".format(
func=_qualified_name(func),
argname=argname,
arg=arg,
),
)
def ensure_timestamp(func, argname, arg):
"""Argument preprocessor that converts the input into a pandas Timestamp
object.
Usage
-----
>>> from zipline.utils.preprocess import preprocess
>>> @preprocess(ts=ensure_timestamp)
... def foo(ts):
... return ts
>>> foo('2014-01-01')
Timestamp('2014-01-01 00:00:00')
"""
try:
return pd.Timestamp(arg)
except ValueError as e:
raise TypeError(
"{func}() couldn't convert argument "
"{argname}={arg!r} to a pandas Timestamp.\n"
"Original error was: {t}: {e}".format(
func=_qualified_name(func),
argname=argname,
arg=arg,
t=_qualified_name(type(e)),
e=e,
),
)
def expect_dtypes(*_pos, **named):
"""
Preprocessing decorator that verifies inputs have expected numpy dtypes.
Usage
-----
>>> from numpy import dtype, arange
>>> @expect_dtypes(x=dtype(int))
... def foo(x, y):
... return x, y
...
>>> foo(arange(3), 'foo')
(array([0, 1, 2]), 'foo')
>>> foo(arange(3, dtype=float), 'foo')
Traceback (most recent call last):
...
TypeError: foo() expected an argument with dtype 'int64' for argument 'x', but got dtype 'float64' instead. # noqa
"""
if _pos:
raise TypeError("expect_dtypes() only takes keyword arguments.")
for name, type_ in iteritems(named):
if not isinstance(type_, (dtype, tuple)):
raise TypeError(
"expect_dtypes() expected a numpy dtype or tuple of dtypes"
" for argument {name!r}, but got {dtype} instead.".format(
name=name, dtype=dtype,
)
)
def _expect_dtype(_dtype_or_dtype_tuple):
"""
Factory for dtype-checking functions that work the @preprocess
decorator.
"""
# Slightly different messages for dtype and tuple of dtypes.
if isinstance(_dtype_or_dtype_tuple, tuple):
allowed_dtypes = _dtype_or_dtype_tuple
else:
allowed_dtypes = (_dtype_or_dtype_tuple,)
template = (
"%(funcname)s() expected a value with dtype {dtype_str} "
"for argument '%(argname)s', but got %(actual)r instead."
).format(dtype_str=' or '.join(repr(d.name) for d in allowed_dtypes))
def check_dtype(value):
return getattr(value, 'dtype', None) not in allowed_dtypes
def display_bad_value(value):
# If the bad value has a dtype, but it's wrong, show the dtype
# name.
try:
return value.dtype.name
except AttributeError:
return value
return make_check(
exc_type=TypeError,
template=template,
pred=check_dtype,
actual=display_bad_value,
)
return preprocess(**valmap(_expect_dtype, named))
def expect_types(*_pos, **named):
"""
Preprocessing decorator that verifies inputs have expected types.
Usage
-----
>>> @expect_types(x=int, y=str)
... def foo(x, y):
... return x, y
...
>>> foo(2, '3')
(2, '3')
>>> foo(2.0, '3')
Traceback (most recent call last):
...
TypeError: foo() expected an argument of type 'int' for argument 'x', but got float instead. # noqa
"""
if _pos:
raise TypeError("expect_types() only takes keyword arguments.")
for name, type_ in iteritems(named):
if not isinstance(type_, (type, tuple)):
raise TypeError(
"expect_types() expected a type or tuple of types for "
"argument '{name}', but got {type_} instead.".format(
name=name, type_=type_,
)
)
def _expect_type(type_):
# Slightly different messages for type and tuple of types.
_template = (
"%(funcname)s() expected a value of type {type_or_types} "
"for argument '%(argname)s', but got %(actual)s instead."
)
if isinstance(type_, tuple):
template = _template.format(
type_or_types=' or '.join(map(_qualified_name, type_))
)
else:
template = _template.format(type_or_types=_qualified_name(type_))
return make_check(
TypeError,
template,
lambda v: not isinstance(v, type_),
compose(_qualified_name, type),
)
return preprocess(**valmap(_expect_type, named))
if PY3:
_qualified_name = attrgetter('__qualname__')
else:
def _qualified_name(obj):
"""
Return the fully-qualified name (ignoring inner classes) of a type.
"""
module = obj.__module__
if module in ('__builtin__', '__main__', 'builtins'):
return obj.__name__
return '.'.join([module, obj.__name__])
def make_check(exc_type, template, pred, actual):
"""
Factory for making preprocessing functions that check a predicate on the
input value.
Parameters
----------
exc_type : Exception
The exception type to raise if the predicate fails.
template : str
A template string to use to create error messages.
Should have %-style named template parameters for 'funcname',
'argname', and 'actual'.
pred : function[object -> bool]
A function to call on the argument being preprocessed. If the
predicate returns `True`, we raise an instance of `exc_type`.
actual : function[object -> object]
A function to call on bad values to produce the value to display in the
error message.
"""
def _check(func, argname, argvalue):
if pred(argvalue):
raise exc_type(
template % {
'funcname': _qualified_name(func),
'argname': argname,
'actual': actual(argvalue),
},
)
return argvalue
return _check
def optional(type_):
"""
Helper for use with `expect_types` when an input can be `type_` or `None`.
Returns an object such that both `None` and instances of `type_` pass
checks of the form `isinstance(obj, optional(type_))`.
Parameters
----------
type_ : type
Type for which to produce an option.
Examples
--------
>>> isinstance({}, optional(dict))
True
>>> isinstance(None, optional(dict))
True
>>> isinstance(1, optional(dict))
False
"""
return (type_, type(None))
def expect_element(*_pos, **named):
"""
Preprocessing decorator that verifies inputs are elements of some
expected collection.
Usage
-----
>>> @expect_element(x=('a', 'b'))
... def foo(x):
... return x.upper()
...
>>> foo('a')
'A'
>>> foo('b')
'B'
>>> foo('c')
Traceback (most recent call last):
...
ValueError: foo() expected a value in ('a', 'b') for argument 'x', but got 'c' instead. # noqa
Notes
-----
This uses the `in` operator (__contains__) to make the containment check.
This allows us to use any custom container as long as the object supports
the container protocol.
"""
if _pos:
raise TypeError("expect_element() only takes keyword arguments.")
def _expect_element(collection):
template = (
"%(funcname)s() expected a value in {collection} "
"for argument '%(argname)s', but got %(actual)s instead."
).format(collection=collection)
return make_check(
ValueError,
template,
complement(op.contains(collection)),
repr,
)
return preprocess(**valmap(_expect_element, named))
def expect_dimensions(**dimensions):
"""
Preprocessing decorator that verifies inputs are numpy arrays with a
specific dimensionality.
Usage
-----
>>> from numpy import array
>>> @expect_dimensions(x=1, y=2)
... def foo(x, y):
... return x[0] + y[0, 0]
...
>>> foo(array([1, 1]), array([[1, 1], [2, 2]]))
2
>>> foo(array([1, 1], array([1, 1])))
Traceback (most recent call last):
...
TypeError: foo() expected a 2-D array for argument 'y', but got a 1-D array instead. # noqa
"""
def _expect_dimension(expected_ndim):
def _check(func, argname, argvalue):
funcname = _qualified_name(func)
actual_ndim = argvalue.ndim
if actual_ndim != expected_ndim:
if actual_ndim == 0:
actual_repr = 'scalar'
else:
actual_repr = "%d-D array" % actual_ndim
raise ValueError(
"{func}() expected a {expected:d}-D array"
" for argument {argname!r}, but got a {actual}"
" instead.".format(
func=funcname,
expected=expected_ndim,
argname=argname,
actual=actual_repr,
)
)
return argvalue
return _check
return preprocess(**valmap(_expect_dimension, dimensions))
def coerce(from_, to, **to_kwargs):
"""
A preprocessing decorator that coerces inputs of a given type by passing
them to a callable.
Parameters
----------
from : type or tuple or types
Inputs types on which to call ``to``.
to : function
Coercion function to call on inputs.
**to_kwargs
Additional keywords to forward to every call to ``to``.
Usage
-----
>>> @preprocess(x=coerce(float, int), y=coerce(float, int))
... def floordiff(x, y):
... return x - y
...
>>> floordiff(3.2, 2.5)
1
>>> @preprocess(x=coerce(str, int, base=2), y=coerce(str, int, base=2))
... def add_binary_strings(x, y):
... return bin(x + y)[2:]
...
>>> add_binary_strings('101', '001')
'110'
"""
def preprocessor(func, argname, arg):
if isinstance(arg, from_):
return to(arg, **to_kwargs)
return arg
return preprocessor
class error_keywords(object):
def __init__(self, *args, **kwargs):
self.messages = kwargs
def __call__(self, func):
def assert_keywords_and_call(*args, **kwargs):
for field, message in iteritems(self.messages):
if field in kwargs:
raise TypeError(message)
return func(*args, **kwargs)
return assert_keywords_and_call
coerce_string = partial(coerce, string_types)