A vanilla seed (s43) lacked the held-out deploy eval, so its train series fell
back to the noisy n=28 per-step hack_s while other seeds used the n=64 eval.
Averaging mixed estimators fabricated a vanilla train-vs-deploy gap that does
not exist (lie-factor). Now: train series reuses the knob-off eval only (nan if
absent -> seed drops from the mean), and missing eval columns normalise to nan
so absent==all-nan. Regenerated all figures from logs. The canonical
train_vs_deploy_60 (has hk_on) is unchanged; sub4/longrun byproducts now show
train==deploy honestly (no knob-on data to split).
Co-Authored-By: Claudypoo <288921227+claudypoo@users.noreply.github.com>
Job 77 (vanilla s41) landed -> both arms n=3. Fill tab:keynote + fig:keynote
caption, add paired t-test, pin the exact 6-log regen command (just dyn
--latest-per-arm clobbers the band). Regenerated dyn_sub4 figure from the 6
explicit seed logs, fixing the 87cca9a clobber. Journal entry 2026-06-03(a).
Also: README points to main.tex and drops the stale n=1 findings block; record
two OpenReview URLs as a TODO in related work (mine reviews for shared critiques).
Closes A1/A2 (#173).
Co-Authored-By: Claudypoo <288921227+claudypoo@users.noreply.github.com>
Audit of all 4 plot scripts (plot_dynamics/substrate/emergence/deploy_overlay):
- One save_fig(fig, path) helper in figs.py writes png+svg+pdf (vector for the
paper, png for the blog). All scripts call it.
- arm_label() map: reader-facing names only -- route2->route, drop 'knob'/'the
cheat' from titles and the train-vs-deploy story (adapter on/off, reward hack).
- Titles off by default (the paper/blog caption carries it); --title re-enables
for standalone research use.
- dump_data CSV now carries every plotted series; plot_dynamics --from-csv
re-renders the three figures from the committed CSV with no logs (logs/ and
out/runs/ are gitignored; out/figs/*.csv is tracked). Round-trip verified.
- Commit the regenerated dyn_sub4 figures in all 3 formats + the CSV.
Co-Authored-By: Claudypoo <288921227+claudypoo@users.noreply.github.com>
wassname