From fc09d8d316422f4f2a0c0cbb95a5d5d57f1f2113 Mon Sep 17 00:00:00 2001 From: shemmi Date: Fri, 5 Jul 2024 21:20:12 +0900 Subject: [PATCH 01/22] Publish jupyterlab optuna --- jupyerlab/README.md | 95 + jupyerlab/RELEASE.md | 111 + jupyerlab/install.json | 5 + .../server-config/jupyterlab_optuna.json | 7 + jupyerlab/jupyterlab_optuna/__init__.py | 36 + jupyerlab/jupyterlab_optuna/handlers.py | 94 + jupyerlab/package.json | 130 + jupyerlab/pyproject.toml | 81 + jupyerlab/setup.py | 1 + jupyerlab/src/apiClient.ts | 419 + .../src/components/JupyterLabEntrypoint.tsx | 239 + jupyerlab/src/handler.ts | 46 + jupyerlab/src/index.ts | 69 + jupyerlab/src/widget.tsx | 14 + jupyerlab/style/base.css | 5 + jupyerlab/style/index.css | 1 + jupyerlab/style/index.js | 1 + jupyerlab/tsconfig.json | 27 + jupyerlab/yarn.lock | 6785 +++++++++++++++++ 19 files changed, 8166 insertions(+) create mode 100644 jupyerlab/README.md create mode 100644 jupyerlab/RELEASE.md create mode 100644 jupyerlab/install.json create mode 100644 jupyerlab/jupyter-config/server-config/jupyterlab_optuna.json create mode 100644 jupyerlab/jupyterlab_optuna/__init__.py create mode 100644 jupyerlab/jupyterlab_optuna/handlers.py create mode 100644 jupyerlab/package.json create mode 100644 jupyerlab/pyproject.toml create mode 100644 jupyerlab/setup.py create mode 100644 jupyerlab/src/apiClient.ts create mode 100644 jupyerlab/src/components/JupyterLabEntrypoint.tsx create mode 100644 jupyerlab/src/handler.ts create mode 100644 jupyerlab/src/index.ts create mode 100644 jupyerlab/src/widget.tsx create mode 100644 jupyerlab/style/base.css create mode 100644 jupyerlab/style/index.css create mode 100644 jupyerlab/style/index.js create mode 100644 jupyerlab/tsconfig.json create mode 100644 jupyerlab/yarn.lock diff --git a/jupyerlab/README.md b/jupyerlab/README.md new file mode 100644 index 00000000..fc07cfbc --- /dev/null +++ b/jupyerlab/README.md @@ -0,0 +1,95 @@ +# jupyterlab-optuna + +A JupyterLab extension for Optuna + +## Requirements + +- JupyterLab >= 4.0.0 + +## Install + +To install the extension, execute: + +```bash +pip install jupyterlab-optuna +``` + +## Uninstall + +To remove the extension, execute: + +```bash +pip uninstall jupyterlab-optuna +``` + +## Troubleshoot + +If you are seeing the frontend extension, but it is not working, check +that the server extension is enabled: + +```bash +jupyter server extension list +``` + +If the server extension is installed and enabled, but you are not seeing +the frontend extension, check the frontend extension is installed: + +```bash +jupyter labextension list +``` + +## Contributing + +### Development install + +Note: You will need NodeJS to build the extension package. + +The `jlpm` command is JupyterLab's pinned version of +[yarn](https://yarnpkg.com/) that is installed with JupyterLab. You may use +`yarn` or `npm` in lieu of `jlpm` below. + +```bash +# Clone the repo to your local environment +# Change directory to the jupyterlab_optuna directory +# Install package in development mode +pip install -e ".[dev]" +# Link your development version of the extension with JupyterLab +jupyter labextension develop . --overwrite +# Server extension must be manually installed in develop mode +jupyter server extension enable jupyterlab_optuna +# Rebuild extension Typescript source after making changes +jlpm build +``` + +You can watch the source directory and run JupyterLab at the same time in different terminals to watch for changes in the extension's source and automatically rebuild the extension. + +```bash +# Watch the source directory in one terminal, automatically rebuilding when needed +jlpm watch +# Run JupyterLab in another terminal +jupyter lab +``` + +With the watch command running, every saved change will immediately be built locally and available in your running JupyterLab. Refresh JupyterLab to load the change in your browser (you may need to wait several seconds for the extension to be rebuilt). + +By default, the `jlpm build` command generates the source maps for this extension to make it easier to debug using the browser dev tools. To also generate source maps for the JupyterLab core extensions, you can run the following command: + +```bash +jupyter lab build --minimize=False +``` + +### Development uninstall + +```bash +# Server extension must be manually disabled in develop mode +jupyter server extension disable jupyterlab_optuna +pip uninstall jupyterlab_optuna +``` + +In development mode, you will also need to remove the symlink created by `jupyter labextension develop` +command. To find its location, you can run `jupyter labextension list` to figure out where the `labextensions` +folder is located. Then you can remove the symlink named `jupyterlab-optuna` within that folder. + +### Packaging the extension + +See [RELEASE](RELEASE.md) diff --git a/jupyerlab/RELEASE.md b/jupyerlab/RELEASE.md new file mode 100644 index 00000000..b39fc4c4 --- /dev/null +++ b/jupyerlab/RELEASE.md @@ -0,0 +1,111 @@ +# Making a new release of jupyterlab_optuna + +The extension can be published to `PyPI` and `npm` manually or using the [Jupyter Releaser](https://github.com/jupyter-server/jupyter_releaser). + +## Manual release + +### Python package + +This extension can be distributed as Python packages. All of the Python +packaging instructions are in the `pyproject.toml` file to wrap your extension in a +Python package. Before generating a package, you first need to install some tools: + +```bash +pip install build twine hatch +``` + +Bump the version using `hatch`. By default this will create a tag. +See the docs on [hatch-nodejs-version](https://github.com/agoose77/hatch-nodejs-version#semver) for details. + +```bash +hatch version +``` + +Make sure to clean up all the development files before building the package: + +```bash +jlpm clean:all +``` + +You could also clean up the local git repository: + +```bash +git clean -dfX +``` + +To create a Python source package (`.tar.gz`) and the binary package (`.whl`) in the `dist/` directory, do: + +```bash +python -m build +``` + +> `python setup.py sdist bdist_wheel` is deprecated and will not work for this package. + +Then to upload the package to PyPI, do: + +```bash +twine upload dist/* +``` + +### NPM package + +To publish the frontend part of the extension as a NPM package, do: + +```bash +npm login +npm publish --access public +``` + +## Automated releases with the Jupyter Releaser + +The extension repository should already be compatible with the Jupyter Releaser. + +Check out the [workflow documentation](https://jupyter-releaser.readthedocs.io/en/latest/get_started/making_release_from_repo.html) for more information. + +Here is a summary of the steps to cut a new release: + +- Add tokens to the [Github Secrets](https://docs.github.com/en/actions/security-guides/encrypted-secrets) in the repository: + - `ADMIN_GITHUB_TOKEN` (with "public_repo" and "repo:status" permissions); see the [documentation](https://docs.github.com/en/authentication/keeping-your-account-and-data-secure/creating-a-personal-access-token) + - `NPM_TOKEN` (with "automation" permission); see the [documentation](https://docs.npmjs.com/creating-and-viewing-access-tokens) +- Set up PyPI + +
Using PyPI trusted publisher (modern way) + +- Set up your PyPI project by [adding a trusted publisher](https://docs.pypi.org/trusted-publishers/adding-a-publisher/) + - The _workflow name_ is `publish-release.yml` and the _environment_ should be left blank. +- Ensure the publish release job as `permissions`: `id-token : write` (see the [documentation](https://docs.pypi.org/trusted-publishers/using-a-publisher/)) + +
+ +
Using PyPI token (legacy way) + +- If the repo generates PyPI release(s), create a scoped PyPI [token](https://packaging.python.org/guides/publishing-package-distribution-releases-using-github-actions-ci-cd-workflows/#saving-credentials-on-github). We recommend using a scoped token for security reasons. + +- You can store the token as `PYPI_TOKEN` in your fork's `Secrets`. + + - Advanced usage: if you are releasing multiple repos, you can create a secret named `PYPI_TOKEN_MAP` instead of `PYPI_TOKEN` that is formatted as follows: + + ```text + owner1/repo1,token1 + owner2/repo2,token2 + ``` + + If you have multiple Python packages in the same repository, you can point to them as follows: + + ```text + owner1/repo1/path/to/package1,token1 + owner1/repo1/path/to/package2,token2 + ``` + +
+ +- Go to the Actions panel +- Run the "Step 1: Prep Release" workflow +- Check the draft changelog +- Run the "Step 2: Publish Release" workflow + +## Publishing to `conda-forge` + +If the package is not on conda forge yet, check the documentation to learn how to add it: https://conda-forge.org/docs/maintainer/adding_pkgs.html + +Otherwise a bot should pick up the new version publish to PyPI, and open a new PR on the feedstock repository automatically. diff --git a/jupyerlab/install.json b/jupyerlab/install.json new file mode 100644 index 00000000..11e37be9 --- /dev/null +++ b/jupyerlab/install.json @@ -0,0 +1,5 @@ +{ + "packageManager": "python", + "packageName": "jupyterlab_optuna", + "uninstallInstructions": "Use your Python package manager (pip, conda, etc.) to uninstall the package jupyterlab_optuna" +} diff --git a/jupyerlab/jupyter-config/server-config/jupyterlab_optuna.json b/jupyerlab/jupyter-config/server-config/jupyterlab_optuna.json new file mode 100644 index 00000000..b2f349d3 --- /dev/null +++ b/jupyerlab/jupyter-config/server-config/jupyterlab_optuna.json @@ -0,0 +1,7 @@ +{ + "ServerApp": { + "jpserver_extensions": { + "jupyterlab_optuna": true + } + } +} diff --git a/jupyerlab/jupyterlab_optuna/__init__.py b/jupyerlab/jupyterlab_optuna/__init__.py new file mode 100644 index 00000000..5d693c0e --- /dev/null +++ b/jupyerlab/jupyterlab_optuna/__init__.py @@ -0,0 +1,36 @@ +try: + from ._version import __version__ +except ImportError: + # Fallback when using the package in dev mode without installing + # in editable mode with pip. It is highly recommended to install + # the package from a stable release or in editable mode: https://pip.pypa.io/en/stable/topics/local-project-installs/#editable-installs + import warnings + warnings.warn("Importing 'jupyterlab_optuna' outside a proper installation.") + __version__ = "dev" +from .handlers import setup_handlers + + +def _jupyter_labextension_paths(): + return [{ + "src": "labextension", + "dest": "jupyterlab-optuna" + }] + + +def _jupyter_server_extension_points(): + return [{ + "module": "jupyterlab_optuna" + }] + + +def _load_jupyter_server_extension(server_app): + """Registers the API handler to receive HTTP requests from the frontend extension. + + Parameters + ---------- + server_app: jupyterlab.labapp.LabApp + JupyterLab application instance + """ + setup_handlers(server_app.web_app) + name = "jupyterlab_optuna" + server_app.log.info(f"Registered {name} server extension") diff --git a/jupyerlab/jupyterlab_optuna/handlers.py b/jupyerlab/jupyterlab_optuna/handlers.py new file mode 100644 index 00000000..65e409d8 --- /dev/null +++ b/jupyerlab/jupyterlab_optuna/handlers.py @@ -0,0 +1,94 @@ +from __future__ import annotations + +import json +import threading +from typing import TYPE_CHECKING + +import tornado +from jupyter_server.base.handlers import APIHandler +from jupyter_server.utils import url_path_join +from optuna_dashboard.artifact._backend_to_store import to_artifact_store + +try: + from optuna.artifacts import FileSystemArtifactStore +except ImportError: + from optuna_dashboard.artifact.file_system import \ + FileSystemBackend as FileSystemArtifactStore + +from optuna_dashboard import wsgi +from tornado.web import FallbackHandler +from tornado.wsgi import WSGIContainer + +if TYPE_CHECKING: + from _typeshed.wsgi import WSGIApplication + + +API_NAMESPACE = "jupyterlab-optuna" + +_dashboard_app: WSGIApplication | None = None +_is_initialized = False +threading_lock = threading.Lock() + + +class RouteHandler(APIHandler): + @tornado.web.authenticated + def post(self): + global _dashboard_app, _is_initialized + + input_data = self.get_json_body() + storage_url = input_data.get("storage_url") + artifact_path = input_data.get("artifact_path") + + if storage_url is None: + self.set_status(400) + self.finish(json.dumps({"reason": "storage_url is required"})) + return + + if artifact_path: + artifact_store = to_artifact_store(FileSystemArtifactStore(artifact_path)) + else: + artifact_store = None + + with threading_lock: + _dashboard_app = wsgi(storage=storage_url, artifact_store=artifact_store) + _is_initialized = True + self.finish(json.dumps({"is_initialized": True})) + + +class InitializedStateHandler(APIHandler): + @tornado.web.authenticated + def get(self): + self.finish(json.dumps({"is_initialized": _is_initialized})) + + +def dashboard_app(env, start_response): + # Set Content-Type + if "/api/" in env["PATH_INFO"]: + env["CONTENT_TYPE"] = "application/json" + env["PATH_INFO"] = env["PATH_INFO"].replace(f"/{API_NAMESPACE}", "") + + if _dashboard_app is None: + start_response("400 Bad Request", [{"Content-Type": "application/json"}]) + return [b'{"reason": "app is not initialized"}'] + + return _dashboard_app(env, start_response) + + +def setup_handlers(web_app): + host_pattern = ".*$" + + base_url = web_app.settings["base_url"] + # Prepend the base_url so that it works in a JupyterHub setting + initialize_route_pattern = url_path_join(base_url, API_NAMESPACE, "api/is_initialized") + handlers = [(initialize_route_pattern, InitializedStateHandler)] + web_app.add_handlers(host_pattern, handlers) + + resister_route_pattern = url_path_join(base_url, API_NAMESPACE, "api/register_dashboard_app") + handlers = [(resister_route_pattern, RouteHandler)] + web_app.add_handlers(host_pattern, handlers) + + route_pattern = url_path_join(base_url, API_NAMESPACE, r"(.*)") + handlers = [ + (route_pattern, FallbackHandler, dict(fallback=WSGIContainer(dashboard_app))), + ] + web_app.add_handlers(host_pattern, handlers) diff --git a/jupyerlab/package.json b/jupyerlab/package.json new file mode 100644 index 00000000..1f8bc101 --- /dev/null +++ b/jupyerlab/package.json @@ -0,0 +1,130 @@ +{ + "name": "jupyterlab-optuna", + "version": "0.1.0", + "description": "A JupyterLab extension for Optuna", + "keywords": [ + "jupyter", + "jupyterlab", + "jupyterlab-extension", + "optuna" + ], + "homepage": "https://github.com/optuna/optuna-dashboard", + "bugs": { + "url": "https://github.com/optuna/optuna-dashboard/issues" + }, + "license": "MIT", + "author": "Optuna Development Team", + "files": [ + "lib/**/*.{d.ts,eot,gif,html,jpg,js,js.map,json,png,svg,woff2,ttf}", + "style/**/*.{css,js,eot,gif,html,jpg,json,png,svg,woff2,ttf}" + ], + "main": "lib/index.js", + "types": "lib/index.d.ts", + "style": "style/index.css", + "repository": { + "type": "git", + "url": "https://github.com/optuna/optuna-dashboard.git" + }, + "scripts": { + "build": "jlpm build:lib && jlpm build:labextension:dev", + "build:prod": "jlpm clean && jlpm build:lib:prod && jlpm build:labextension", + "build:labextension": "jupyter labextension build .", + "build:labextension:dev": "jupyter labextension build --development True .", + "build:lib": "tsc --sourceMap", + "build:lib:prod": "tsc", + "clean": "jlpm clean:lib", + "clean:lib": "rimraf lib tsconfig.tsbuildinfo", + "clean:labextension": "rimraf jupyterlab_optuna/labextension jupyterlab_optuna/_version.py", + "clean:all": "jlpm clean:lib && jlpm clean:labextension", + "install:extension": "jlpm build", + "lint": "jlpm prettier", + "lint:check": "jlpm prettier:check", + "prettier": "jlpm prettier:base --write --list-different", + "prettier:base": "prettier \"**/*{.ts,.tsx,.js,.jsx,.css,.json,.md}\"", + "prettier:check": "jlpm prettier:base --check", + "watch": "run-p watch:src watch:labextension", + "watch:src": "tsc -w --sourceMap", + "watch:labextension": "jupyter labextension watch ." + }, + "dependencies": { + "@emotion/react": "^11.10.8", + "@emotion/styled": "^11.10.8", + "@jupyterlab/application": "^4.0.0", + "@jupyterlab/apputils": "^4.0.0", + "@jupyterlab/coreutils": "^6.0.0", + "@jupyterlab/launcher": "^4.0.0", + "@jupyterlab/services": "^7.0.0", + "@mui/icons-material": "^5.11.6", + "@mui/lab": "^5.0.0-alpha.128", + "@mui/material": "^5.12.1", + "@types/chroma-js": "^2.4.1", + "@types/signals": "^1.0.2", + "elkjs": "^0.8.2", + "ngl": "^2.1.1", + "notistack": "^3.0.1", + "plotly.js-dist-min": "^2.22.0", + "react": "^18.2.0", + "react-dom": "^18.2.0", + "react-markdown": "^8.0.4", + "react-router-dom": "6.11.0", + "react-syntax-highlighter": "^15.5.0", + "reactflow": "^11.8.3", + "recoil": "^0.7.7", + "rehype-mathjax": "^4.0.2", + "remark-gfm": "^3.0.1", + "remark-math": "^5.1.1" + }, + "devDependencies": { + "@jupyterlab/builder": "^4.0.0", + "@types/json-schema": "^7.0.11", + "@types/plotly.js": "^2.12.11", + "@types/react": "^18.0.26", + "@types/react-dom": "^18.0.10", + "@types/react-syntax-highlighter": "^15.5.5", + "css-loader": "^6.8.1", + "mkdirp": "^1.0.3", + "npm-run-all": "^4.1.5", + "prettier": "^2.8.7", + "rimraf": "^4.4.1", + "source-map-loader": "^1.0.2", + "style-loader": "^3.3.3", + "typescript": "~5.0.2", + "yjs": "^13.5.0" + }, + "sideEffects": [ + "style/*.css", + "style/index.js" + ], + "styleModule": "style/index.js", + "publishConfig": { + "access": "public" + }, + "jupyterlab": { + "discovery": { + "server": { + "managers": [ + "pip" + ], + "base": { + "name": "jupyterlab_optuna" + } + } + }, + "extension": true, + "outputDir": "jupyterlab_optuna/labextension" + }, + "prettier": { + "singleQuote": true, + "trailingComma": "none", + "arrowParens": "avoid", + "endOfLine": "auto", + "overrides": [ + { + "files": "package.json", + "options": { + "tabWidth": 4 + } + } + ] + } +} diff --git a/jupyerlab/pyproject.toml b/jupyerlab/pyproject.toml new file mode 100644 index 00000000..201f68f3 --- /dev/null +++ b/jupyerlab/pyproject.toml @@ -0,0 +1,81 @@ +[build-system] +requires = ["hatchling>=1.5.0", "jupyterlab>=4.0.0,<5", "hatch-nodejs-version>=0.3.2"] +build-backend = "hatchling.build" + +[project] +name = "jupyterlab-optuna" +readme = "README.md" +license = { file = "LICENSE" } +requires-python = ">=3.8" +classifiers = [ + "Framework :: Jupyter", + "Framework :: Jupyter :: JupyterLab", + "Framework :: Jupyter :: JupyterLab :: 4", + "Framework :: Jupyter :: JupyterLab :: Extensions", + "Framework :: Jupyter :: JupyterLab :: Extensions :: Prebuilt", + "License :: OSI Approved :: MIT License", + "Programming Language :: Python", + "Programming Language :: Python :: 3", + "Programming Language :: Python :: 3.8", + "Programming Language :: Python :: 3.9", + "Programming Language :: Python :: 3.10", + "Programming Language :: Python :: 3.11", +] +dependencies = [ + "jupyter_server>=2.0.1,<3", "optuna-dashboard>=0.12.0" +] +dynamic = ["version", "description", "authors", "urls", "keywords"] + +[project.optional-dependencies] +dev = ["jupyter"] + +[tool.hatch.version] +source = "nodejs" + +[tool.hatch.metadata.hooks.nodejs] +fields = ["description", "authors", "urls"] + +[tool.hatch.build.targets.sdist] +artifacts = ["jupyterlab_optuna/labextension"] +exclude = [".github", "binder"] + +[tool.hatch.build.targets.wheel.shared-data] +"jupyterlab_optuna/labextension" = "share/jupyter/labextensions/jupyterlab-optuna" +"install.json" = "share/jupyter/labextensions/jupyterlab-optuna/install.json" +"jupyter-config/server-config" = "etc/jupyter/jupyter_server_config.d" + +[tool.hatch.build.hooks.version] +path = "jupyterlab_optuna/_version.py" + +[tool.hatch.build.hooks.jupyter-builder] +dependencies = ["hatch-jupyter-builder>=0.5"] +build-function = "hatch_jupyter_builder.npm_builder" +ensured-targets = [ + "jupyterlab_optuna/labextension/static/style.js", + "jupyterlab_optuna/labextension/package.json", +] +skip-if-exists = ["jupyterlab_optuna/labextension/static/style.js"] + +[tool.hatch.build.hooks.jupyter-builder.build-kwargs] +build_cmd = "build:prod" +npm = ["jlpm"] + +[tool.hatch.build.hooks.jupyter-builder.editable-build-kwargs] +build_cmd = "install:extension" +npm = ["jlpm"] +source_dir = "src" +build_dir = "jupyterlab_optuna/labextension" + +[tool.jupyter-releaser.options] +version_cmd = "hatch version" + +[tool.jupyter-releaser.hooks] +before-build-npm = [ + "python -m pip install 'jupyterlab>=4.0.0,<5'", + "jlpm", + "jlpm build:prod" +] +before-build-python = ["jlpm clean:all"] + +[tool.check-wheel-contents] +ignore = ["W002"] diff --git a/jupyerlab/setup.py b/jupyerlab/setup.py new file mode 100644 index 00000000..aefdf20d --- /dev/null +++ b/jupyerlab/setup.py @@ -0,0 +1 @@ +__import__("setuptools").setup() diff --git a/jupyerlab/src/apiClient.ts b/jupyerlab/src/apiClient.ts new file mode 100644 index 00000000..6a365c2e --- /dev/null +++ b/jupyerlab/src/apiClient.ts @@ -0,0 +1,419 @@ +import { requestAPI } from './handler'; + +type APIMeta = { + artifact_is_available: boolean; +}; + +export const getMetaInfoAPI = (): Promise => { + return requestAPI(`/api/meta`).then(res => res); +}; + +interface TrialResponse { + trial_id: number; + study_id: number; + number: number; + state: TrialState; + values?: TrialValueNumber[]; + intermediate_values: TrialIntermediateValue[]; + datetime_start?: string; + datetime_complete?: string; + params: TrialParam[]; + fixed_params: { + name: string; + param_external_value: string; + }[]; + user_attrs: Attribute[]; + note: Note; + artifacts: Artifact[]; + constraints: number[]; +} + +const convertTrialResponse = (res: TrialResponse): Trial => { + return { + trial_id: res.trial_id, + study_id: res.study_id, + number: res.number, + state: res.state, + values: res.values, + intermediate_values: res.intermediate_values, + datetime_start: res.datetime_start + ? new Date(res.datetime_start) + : undefined, + datetime_complete: res.datetime_complete + ? new Date(res.datetime_complete) + : undefined, + params: res.params, + fixed_params: res.fixed_params, + user_attrs: res.user_attrs, + note: res.note, + artifacts: res.artifacts, + constraints: res.constraints + }; +}; + +interface PreferenceHistoryResponse { + history: { + id: string + candidates: number[] + clicked: number + mode: PreferenceFeedbackMode + timestamp: string + preferences: [number, number][] + } + is_removed: boolean +} + +const convertPreferenceHistory = ( + res: PreferenceHistoryResponse +): PreferenceHistory => { + return { + id: res.history.id, + candidates: res.history.candidates, + clicked: res.history.clicked, + feedback_mode: res.history.mode, + timestamp: new Date(res.history.timestamp), + preferences: res.history.preferences, + is_removed: res.is_removed, + } +} + +interface StudyDetailResponse { + name: string; + datetime_start: string; + directions: StudyDirection[]; + user_attrs: Attribute[]; + trials: TrialResponse[]; + best_trials: TrialResponse[]; + intersection_search_space: SearchSpaceItem[]; + union_search_space: SearchSpaceItem[]; + union_user_attrs: AttributeSpec[]; + has_intermediate_values: boolean; + note: Note; + is_preferential: boolean; + objective_names?: string[]; + form_widgets?: FormWidgets; + preferences?: [number, number][]; + preference_history?: PreferenceHistoryResponse[]; + feedback_component_type: FeedbackComponentType; + skipped_trial_numbers?: number[] +} + +export const getStudyDetailAPI = ( + studyId: number, + nLocalTrials: number +): Promise => { + return requestAPI( + `/api/studies/${studyId}/?after=${nLocalTrials}`, + { + method: 'GET' + } + ).then(res => { + const trials = res.trials.map((trial): Trial => { + return convertTrialResponse(trial); + }); + const best_trials = res.best_trials.map((trial): Trial => { + return convertTrialResponse(trial); + }); + return { + id: studyId, + name: res.name, + datetime_start: new Date(res.datetime_start), + directions: res.directions, + user_attrs: res.user_attrs, + trials: trials, + best_trials: best_trials, + union_search_space: res.union_search_space, + intersection_search_space: res.intersection_search_space, + union_user_attrs: res.union_user_attrs, + has_intermediate_values: res.has_intermediate_values, + note: res.note, + objective_names: res.objective_names, + form_widgets: res.form_widgets, + is_preferential: res.is_preferential, + feedback_component_type: res.feedback_component_type, + preferences: res.preferences, + preference_history: res.preference_history?.map( + convertPreferenceHistory + ), + skipped_trial_numbers: res.skipped_trial_numbers ?? [], + }; + }); +}; + +interface StudySummariesResponse { + study_summaries: { + study_id: number; + study_name: string; + directions: StudyDirection[]; + user_attrs: Attribute[]; + is_preferential: boolean; + datetime_start?: string; + }[]; +} + +export const getStudySummariesAPI = (): Promise => { + return requestAPI(`/api/studies`).then(res => { + return res.study_summaries.map((study): StudySummary => { + return { + study_id: study.study_id, + study_name: study.study_name, + directions: study.directions, + user_attrs: study.user_attrs, + is_preferential: study.is_preferential, + datetime_start: study.datetime_start + ? new Date(study.datetime_start) + : undefined + }; + }); + }); +}; + +interface CreateNewStudyResponse { + study_summary: { + study_id: number; + study_name: string; + directions: StudyDirection[]; + user_attrs: Attribute[]; + is_preferential: boolean, + datetime_start?: string; + }; +} + +export const createNewStudyAPI = ( + studyName: string, + directions: StudyDirection[] +): Promise => { + return requestAPI(`/api/studies`, { + body: JSON.stringify({ + study_name: studyName, + directions + }), + method: 'POST' + }).then(res => { + const study_summary = res.study_summary; + return { + study_id: study_summary.study_id, + study_name: study_summary.study_name, + directions: study_summary.directions, + // best_trial: undefined, + user_attrs: study_summary.user_attrs, + is_preferential: study_summary.is_preferential, + datetime_start: study_summary.datetime_start + ? new Date(study_summary.datetime_start) + : undefined + }; + }); +}; + +export const deleteStudyAPI = (studyId: number): Promise => { + return requestAPI(`/api/studies/${studyId}`, { + method: 'DELETE' + }).then(() => { + return; + }); +}; + +type RenameStudyResponse = { + study_id: number; + study_name: string; + directions: StudyDirection[]; + user_attrs: Attribute[]; + is_preferential: boolean, + datetime_start?: string; +}; + +export const renameStudyAPI = ( + studyId: number, + studyName: string +): Promise => { + return requestAPI(`/api/studies/${studyId}/rename`, { + body: JSON.stringify({ study_name: studyName }), + method: 'POST' + }).then(res => { + return { + study_id: res.study_id, + study_name: res.study_name, + directions: res.directions, + user_attrs: res.user_attrs, + is_preferential: res.is_preferential, + datetime_start: res.datetime_start + ? new Date(res.datetime_start) + : undefined + }; + }); +}; + +export const saveStudyNoteAPI = ( + studyId: number, + note: { version: number; body: string } +): Promise => { + return requestAPI(`/api/studies/${studyId}/note`, { + body: JSON.stringify(note), + method: 'PUT' + }).then(() => { + return; + }); +}; + +export const saveTrialNoteAPI = ( + studyId: number, + trialId: number, + note: { version: number; body: string } +): Promise => { + return requestAPI(`/api/studies/${studyId}/${trialId}/note`, { + body: JSON.stringify(note), + method: 'PUT' + }).then(() => { + return; + }); +}; + +type UploadArtifactAPIResponse = { + artifact_id: string; + artifacts: Artifact[]; +}; + +export const uploadArtifactAPI = ( + studyId: number, + trialId: number, + fileName: string, + dataUrl: string +): Promise => { + return requestAPI( + `/api/artifacts/${studyId}/${trialId}`, + { + body: JSON.stringify({ + file: dataUrl, + filename: fileName + }), + method: 'POST' + } + ).then(res => { + return res; + }); +}; + +export const deleteArtifactAPI = ( + studyId: number, + trialId: number, + artifactId: string +): Promise => { + return requestAPI( + `/api/artifacts/${studyId}/${trialId}/${artifactId}`, + { + method: 'DELETE' + } + ).then(() => { + return; + }); +}; + +export const tellTrialAPI = ( + trialId: number, + state: TrialStateFinished, + values?: number[] +): Promise => { + const req: { state: TrialState; values?: number[] } = { + state: state, + values: values + }; + + return requestAPI(`/api/trials/${trialId}/tell`, { + body: JSON.stringify(req), + method: 'POST' + }).then(() => { + return; + }); +}; + +export const saveTrialUserAttrsAPI = ( + trialId: number, + user_attrs: { [key: string]: number | string } +): Promise => { + const req = { user_attrs: user_attrs }; + + return requestAPI(`/api/trials/${trialId}/user-attrs`, { + body: JSON.stringify(req), + method: 'POST' + }).then(() => { + return; + }); +}; + +interface ParamImportancesResponse { + param_importances: ParamImportance[][]; +} + +export const getParamImportances = ( + studyId: number +): Promise => { + return requestAPI( + `/api/studies/${studyId}/param_importances` + ).then(res => { + return res.param_importances; + }); +}; + +export const reportPreferenceAPI = ( + studyId: number, + candidates: number[], + clicked: number +): Promise => { + return requestAPI(`/api/studies/${studyId}/preference`, { + body: JSON.stringify({ + candidates: candidates, + clicked: clicked, + mode: "ChooseWorst", + }), + method: 'POST' + }).then(() => { + return + }); +} + +export const skipPreferentialTrialAPI = ( + studyId: number, + trialId: number +): Promise => { + return requestAPI(`/api/studies/${studyId}/${trialId}/skip`, { + method: 'POST' + }).then(() => { + return + }) +} + +export const removePreferentialHistoryAPI = ( + studyId: number, + historyUuid: string +): Promise => { + return requestAPI(`/api/studies/${studyId}/preference/${historyUuid}`,{ + method: 'DELETE' + }).then(() => { + return + }) +} + +export const restorePreferentialHistoryAPI = ( + studyId: number, + historyUuid: string +): Promise => { + return requestAPI(`/api/studies/${studyId}/preference/${historyUuid}`,{ + method: 'POST' + }).then(() => { + return + }) +} + +export const reportFeedbackComponentAPI = ( + studyId: number, + component_type: FeedbackComponentType +): Promise => { + return requestAPI( + `/api/studies/${studyId}/preference_feedback_component`, { + body: JSON.stringify({ component_type: component_type }), + method: 'POST' + } + ).then(() => { + return + }) +} diff --git a/jupyerlab/src/components/JupyterLabEntrypoint.tsx b/jupyerlab/src/components/JupyterLabEntrypoint.tsx new file mode 100644 index 00000000..f777b2e3 --- /dev/null +++ b/jupyerlab/src/components/JupyterLabEntrypoint.tsx @@ -0,0 +1,239 @@ +import { + Box, + Button, + CssBaseline, + FormControl, + Typography +} from '@mui/material'; +import CircularProgress from '@mui/material/CircularProgress'; +import RestartAltIcon from '@mui/icons-material/RestartAlt'; +import StartIcon from '@mui/icons-material/Start'; +import { SnackbarProvider, enqueueSnackbar } from 'notistack'; +import React, { + Dispatch, + FC, + SetStateAction, + useEffect, + useState +} from 'react'; +import { App } from './App'; +import { DebouncedInputTextField } from './Debounce'; +import { requestAPI } from '../handler'; + +export const JupyterLabEntrypoint: FC = () => { + const [ready, setReady] = useState(false); + + if (!ready) { + return ( + <> + + + + { + setReady(true); + }} + /> + + + + ); + } else { + return ; + } +}; + +const JupyterLabStartWidget: FC<{ + showOptunaDashboard: () => void; +}> = ({ showOptunaDashboard }) => { + const [loading, setLoading] = useState(true); + const [isInitialized, setIsInitialized] = useState(false); + + useEffect(() => { + setLoading(true); + requestAPI<{ is_initialized: boolean }>(`/api/is_initialized`, { + method: 'GET' + }) + .then(res => { + setIsInitialized(res.is_initialized); + setLoading(false); + }) + .catch(err => { + setLoading(false); + enqueueSnackbar('Failed to check the initialized state', { + variant: 'error' + }); + console.error(err); + }); + }, []); + + if (loading) { + return ( + + + + ); + } + + if (isInitialized) { + return ( + + Continue or Reset? + + Continue with the existing storage URL and artifact path settings, or + you can reset them. + + + + + ); + } + + return ( + + ); +}; + +const StartDashboardForm: FC<{ + showOptunaDashboard: () => void; + setLoading: Dispatch>; +}> = ({ showOptunaDashboard, setLoading }) => { + const [storageURL, setStorageURL] = useState(''); + const [artifactPath, setArtifactPath] = useState(''); + const [isValidURL, setIsValidURL] = useState(false); + + const rfc1738Pattern = new RegExp( + `[\\w\\+]+://([^:/]*(.*)?@)?((\\[[^/]+\\]|[^/:]+)?([^/]*)?)?(/.*)?` + ); + + const handleValidateURL = (url: string): void => { + url.startsWith('redis') || url.match(rfc1738Pattern) + ? setIsValidURL(true) + : setIsValidURL(false); + }; + + const handleCreateNewDashboard = () => { + setLoading(true); + requestAPI<{ is_initialized: boolean }>(`/api/register_dashboard_app`, { + method: 'POST', + body: JSON.stringify({ + storage_url: storageURL, + artifact_path: artifactPath + }) + }) + .then(res => { + setLoading(false); + showOptunaDashboard(); + }) + .catch(err => { + setLoading(false); + enqueueSnackbar('Failed to initialize Optuna Dashboard', { + variant: 'error' + }); + console.error(err); + }); + }; + + return ( + + Initialize Dashboard + + Please enter a storage URL and an artifact path. + + + { + handleValidateURL(s); + setStorageURL(s); + }} + delay={500} + textFieldProps={{ + autoFocus: true, + fullWidth: true, + label: 'Storage URL', + type: 'text', + sx: { margin: '8px 0' } + }} + /> + + + { + setArtifactPath(s); + }} + delay={500} + textFieldProps={{ + fullWidth: true, + label: 'Artifact path (Optional)', + type: 'text', + sx: { margin: '8px 0' } + }} + /> + + + + ); +}; diff --git a/jupyerlab/src/handler.ts b/jupyerlab/src/handler.ts new file mode 100644 index 00000000..fd3bc92f --- /dev/null +++ b/jupyerlab/src/handler.ts @@ -0,0 +1,46 @@ +import { URLExt } from '@jupyterlab/coreutils'; + +import { ServerConnection } from '@jupyterlab/services'; + +/** + * Call the API extension + * + * @param endPoint API REST end point for the extension + * @param init Initial values for the request + * @returns The response body interpreted as JSON + */ +export async function requestAPI( + endPoint = '', + init: RequestInit = {} +): Promise { + // Make request to Jupyter API + const settings = ServerConnection.makeSettings(); + const requestUrl = URLExt.join( + settings.baseUrl, + 'jupyterlab-optuna', // API Namespace + endPoint + ); + + let response: Response; + try { + response = await ServerConnection.makeRequest(requestUrl, init, settings); + } catch (error) { + throw new ServerConnection.NetworkError(error as any); + } + + let data: any = await response.text(); + + if (data.length > 0) { + try { + data = JSON.parse(data); + } catch (error) { + console.log('Not a JSON response body.', response); + } + } + + if (!response.ok) { + throw new ServerConnection.ResponseError(response, data.message || data); + } + + return data; +} diff --git a/jupyerlab/src/index.ts b/jupyerlab/src/index.ts new file mode 100644 index 00000000..0c58bc87 --- /dev/null +++ b/jupyerlab/src/index.ts @@ -0,0 +1,69 @@ +import { + JupyterFrontEnd, + JupyterFrontEndPlugin +} from '@jupyterlab/application'; + +import { ICommandPalette } from '@jupyterlab/apputils'; +import optunaLogo from '../img/optuna_logo.svg'; + +import { ILauncher } from '@jupyterlab/launcher'; +import { LabIcon } from '@jupyterlab/ui-components'; + +import { MainAreaWidget } from '@jupyterlab/apputils'; +import { OptunaDashboardWidget } from './widget'; + +/** + * The command IDs used by the server extension plugin. + */ +namespace CommandIDs { + export const get = 'server:get-file'; + export const ui = 'server:dashboard-ui'; +} + +/** + * Initialization data for the jupyterlab-optuna extension. + */ +const plugin: JupyterFrontEndPlugin = { + id: '@jupyterlab-examples/server-extension:plugin', + description: + 'A minimal JupyterLab extension with backend and frontend parts.', + autoStart: true, + optional: [ILauncher], + requires: [ICommandPalette], + activate: ( + app: JupyterFrontEnd, + palette: ICommandPalette, + launcher: ILauncher | null + ) => { + console.log( + 'JupyterLab extension @jupyterlab-examples/server-extension is activated!' + ); + console.log('ICommandPalette:', palette); + + const { commands, shell } = app; + const optunaIcon = new LabIcon({ + name: 'ui-components:optuna', + svgstr: optunaLogo + }); + + commands.addCommand(CommandIDs.ui, { + caption: 'Launch Optuna Dashboard', + label: 'Optuna Dashboard', + icon: args => (args['isPalette'] ? undefined : optunaIcon), + execute: () => { + const content = new OptunaDashboardWidget(); + const widget = new MainAreaWidget({ content }); + widget.title.label = 'Optuna Dashboard Widget'; + widget.title.icon = optunaIcon; + shell.add(widget, 'main'); + } + }); + if (launcher) { + launcher.add({ + command: CommandIDs.ui + }); + } + } +}; + +export default plugin; diff --git a/jupyerlab/src/widget.tsx b/jupyerlab/src/widget.tsx new file mode 100644 index 00000000..d30ecf9d --- /dev/null +++ b/jupyerlab/src/widget.tsx @@ -0,0 +1,14 @@ +import { ReactWidget } from '@jupyterlab/ui-components'; +import React from 'react'; +import { JupyterLabEntrypoint } from './components/JupyterLabEntrypoint'; + +export class OptunaDashboardWidget extends ReactWidget { + constructor() { + super(); + this.addClass('jp-react-widget'); + } + + render(): JSX.Element { + return ; + } +} diff --git a/jupyerlab/style/base.css b/jupyerlab/style/base.css new file mode 100644 index 00000000..e11f4577 --- /dev/null +++ b/jupyerlab/style/base.css @@ -0,0 +1,5 @@ +/* + See the JupyterLab Developer Guide for useful CSS Patterns: + + https://jupyterlab.readthedocs.io/en/stable/developer/css.html +*/ diff --git a/jupyerlab/style/index.css b/jupyerlab/style/index.css new file mode 100644 index 00000000..8a7ea29e --- /dev/null +++ b/jupyerlab/style/index.css @@ -0,0 +1 @@ +@import url('base.css'); diff --git a/jupyerlab/style/index.js b/jupyerlab/style/index.js new file mode 100644 index 00000000..a028a764 --- /dev/null +++ b/jupyerlab/style/index.js @@ -0,0 +1 @@ +import './base.css'; diff --git a/jupyerlab/tsconfig.json b/jupyerlab/tsconfig.json new file mode 100644 index 00000000..89ed5602 --- /dev/null +++ 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b/jupyterlab/jupyterlab_optuna/__init__.py similarity index 100% rename from jupyerlab/jupyterlab_optuna/__init__.py rename to jupyterlab/jupyterlab_optuna/__init__.py diff --git a/jupyerlab/jupyterlab_optuna/handlers.py b/jupyterlab/jupyterlab_optuna/handlers.py similarity index 100% rename from jupyerlab/jupyterlab_optuna/handlers.py rename to jupyterlab/jupyterlab_optuna/handlers.py diff --git a/jupyerlab/package.json b/jupyterlab/package.json similarity index 100% rename from jupyerlab/package.json rename to jupyterlab/package.json diff --git a/jupyerlab/pyproject.toml b/jupyterlab/pyproject.toml similarity index 100% rename from jupyerlab/pyproject.toml rename to jupyterlab/pyproject.toml diff --git a/jupyerlab/setup.py b/jupyterlab/setup.py similarity index 100% rename from jupyerlab/setup.py rename to jupyterlab/setup.py diff --git a/jupyerlab/src/apiClient.ts b/jupyterlab/src/apiClient.ts similarity index 100% rename from jupyerlab/src/apiClient.ts rename to jupyterlab/src/apiClient.ts diff --git a/jupyerlab/src/components/JupyterLabEntrypoint.tsx b/jupyterlab/src/components/JupyterLabEntrypoint.tsx similarity index 100% rename from jupyerlab/src/components/JupyterLabEntrypoint.tsx rename to jupyterlab/src/components/JupyterLabEntrypoint.tsx diff --git a/jupyerlab/src/handler.ts b/jupyterlab/src/handler.ts similarity index 100% rename from jupyerlab/src/handler.ts rename to jupyterlab/src/handler.ts diff --git a/jupyerlab/src/index.ts b/jupyterlab/src/index.ts similarity index 100% rename from jupyerlab/src/index.ts rename to jupyterlab/src/index.ts diff --git a/jupyerlab/src/widget.tsx b/jupyterlab/src/widget.tsx similarity index 100% rename from jupyerlab/src/widget.tsx rename to jupyterlab/src/widget.tsx diff --git a/jupyerlab/style/base.css b/jupyterlab/style/base.css similarity index 100% rename from jupyerlab/style/base.css rename to jupyterlab/style/base.css diff --git a/jupyerlab/style/index.css b/jupyterlab/style/index.css similarity index 100% rename from jupyerlab/style/index.css rename to jupyterlab/style/index.css diff --git a/jupyerlab/style/index.js b/jupyterlab/style/index.js similarity index 100% rename from jupyerlab/style/index.js rename to jupyterlab/style/index.js diff --git a/jupyerlab/tsconfig.json b/jupyterlab/tsconfig.json similarity index 100% rename from jupyerlab/tsconfig.json rename to jupyterlab/tsconfig.json diff --git a/jupyerlab/yarn.lock b/jupyterlab/yarn.lock similarity index 100% rename from jupyerlab/yarn.lock rename to jupyterlab/yarn.lock From ddec5038a989faebc3d429332bb05a028203067c Mon Sep 17 00:00:00 2001 From: porink0424 Date: Wed, 10 Jul 2024 17:55:04 +0900 Subject: [PATCH 03/22] Add jupyterlab dir to biome.json --- biome.json | 4 +++- 1 file changed, 3 insertions(+), 1 deletion(-) diff --git a/biome.json b/biome.json index 978b1808..a9796e28 100644 --- a/biome.json +++ b/biome.json @@ -10,7 +10,9 @@ "vscode/src/**/*.tsx", "tslib/**/*.ts", "tslib/**/*.tsx", - "tslib/**/*.mjs" + "tslib/**/*.mjs", + "jupyterlab/src/**/*.ts", + "jupyterlab/src/**/*.tsx" ], "ignore": [ "optuna_dashboard/ts/components/PlotlyColorTemplates.ts", From 42a54052d75ba9883117ac3491896cd0b9bb2b7a Mon Sep 17 00:00:00 2001 From: porink0424 Date: Wed, 10 Jul 2024 17:56:50 +0900 Subject: [PATCH 04/22] Add gitignore --- jupyterlab/.gitignore | 2 ++ 1 file changed, 2 insertions(+) create mode 100644 jupyterlab/.gitignore diff --git a/jupyterlab/.gitignore b/jupyterlab/.gitignore new file mode 100644 index 00000000..a37591db --- /dev/null +++ b/jupyterlab/.gitignore @@ -0,0 +1,2 @@ +.yarn/ +jupyterlab_optuna/labextension From dee338a3208b1df25a4a01d915e6366ab60450d1 Mon Sep 17 00:00:00 2001 From: porink0424 Date: Wed, 10 Jul 2024 17:59:21 +0900 Subject: [PATCH 05/22] Add Debounce.tsx --- jupyterlab/src/components/Debounce.tsx | 28 ++++++++++++++++++++++++++ 1 file changed, 28 insertions(+) create mode 100644 jupyterlab/src/components/Debounce.tsx diff --git a/jupyterlab/src/components/Debounce.tsx b/jupyterlab/src/components/Debounce.tsx new file mode 100644 index 00000000..d3ff760d --- /dev/null +++ b/jupyterlab/src/components/Debounce.tsx @@ -0,0 +1,28 @@ +import React, { FC, useEffect } from 'react'; +import { TextField, TextFieldProps } from '@mui/material'; + +export const DebouncedInputTextField: FC<{ + onChange: (s: string, valid: boolean) => void; + delay: number; + textFieldProps: TextFieldProps; +}> = ({ onChange, delay, textFieldProps }) => { + const [text, setText] = React.useState(''); + const [valid, setValidity] = React.useState(true); + useEffect(() => { + const timer = setTimeout(() => { + onChange(text, valid); + }, delay); + return () => { + clearTimeout(timer); + }; + }, [text, delay]); + return ( + { + setText(e.target.value); + setValidity(e.target.validity.valid); + }} + {...textFieldProps} + /> + ); +}; \ No newline at end of file From 64718d6458fde92a8ccce0a82fec88c6efec8243 Mon Sep 17 00:00:00 2001 From: porink0424 Date: Wed, 10 Jul 2024 17:59:59 +0900 Subject: [PATCH 06/22] Add types/index.d.ts --- jupyterlab/src/types/index.d.ts | 4 ++++ 1 file changed, 4 insertions(+) create mode 100644 jupyterlab/src/types/index.d.ts diff --git a/jupyterlab/src/types/index.d.ts b/jupyterlab/src/types/index.d.ts new file mode 100644 index 00000000..acbc20b7 --- /dev/null +++ b/jupyterlab/src/types/index.d.ts @@ -0,0 +1,4 @@ +declare module '*.css'; +declare module '*.png'; +declare module '*.jpg'; +declare module '*.svg'; \ No newline at end of file From 7c0b18f744163bb057705e851fcb36e10d3410ae Mon Sep 17 00:00:00 2001 From: porink0424 Date: Wed, 10 Jul 2024 18:14:23 +0900 Subject: [PATCH 07/22] Implement jupyterAPIClient --- jupyterlab/src/apiClient.ts | 643 +++++++++++------------------- optuna_dashboard/ts/apiClient.ts | 6 +- optuna_dashboard/ts/pkg_index.tsx | 71 +++- 3 files changed, 297 insertions(+), 423 deletions(-) diff --git a/jupyterlab/src/apiClient.ts b/jupyterlab/src/apiClient.ts index 6a365c2e..0234f3d8 100644 --- a/jupyterlab/src/apiClient.ts +++ b/jupyterlab/src/apiClient.ts @@ -1,419 +1,232 @@ -import { requestAPI } from './handler'; +import {APIClient, APIMeta, CompareStudiesPlotType, CreateNewStudyResponse, FeedbackComponentType, ParamImportance, ParamImportancesResponse, PlotResponse, PlotType, RenameStudyResponse, StudyDetail, StudyDetailResponse, StudySummariesResponse, StudySummary, Trial, UploadArtifactAPIResponse} from "@optuna/optuna-dashboard" +import { requestAPI } from "./handler"; +import * as Optuna from "@optuna/types" -type APIMeta = { - artifact_is_available: boolean; -}; +export class JupyterlabAPIClient extends APIClient { + constructor() { + super() + } -export const getMetaInfoAPI = (): Promise => { - return requestAPI(`/api/meta`).then(res => res); -}; - -interface TrialResponse { - trial_id: number; - study_id: number; - number: number; - state: TrialState; - values?: TrialValueNumber[]; - intermediate_values: TrialIntermediateValue[]; - datetime_start?: string; - datetime_complete?: string; - params: TrialParam[]; - fixed_params: { - name: string; - param_external_value: string; - }[]; - user_attrs: Attribute[]; - note: Note; - artifacts: Artifact[]; - constraints: number[]; -} - -const convertTrialResponse = (res: TrialResponse): Trial => { - return { - trial_id: res.trial_id, - study_id: res.study_id, - number: res.number, - state: res.state, - values: res.values, - intermediate_values: res.intermediate_values, - datetime_start: res.datetime_start - ? new Date(res.datetime_start) - : undefined, - datetime_complete: res.datetime_complete - ? new Date(res.datetime_complete) - : undefined, - params: res.params, - fixed_params: res.fixed_params, - user_attrs: res.user_attrs, - note: res.note, - artifacts: res.artifacts, - constraints: res.constraints - }; -}; - -interface PreferenceHistoryResponse { - history: { - id: string - candidates: number[] - clicked: number - mode: PreferenceFeedbackMode - timestamp: string - preferences: [number, number][] - } - is_removed: boolean -} - -const convertPreferenceHistory = ( - res: PreferenceHistoryResponse -): PreferenceHistory => { - return { - id: res.history.id, - candidates: res.history.candidates, - clicked: res.history.clicked, - feedback_mode: res.history.mode, - timestamp: new Date(res.history.timestamp), - preferences: res.history.preferences, - is_removed: res.is_removed, - } -} - -interface StudyDetailResponse { - name: string; - datetime_start: string; - directions: StudyDirection[]; - user_attrs: Attribute[]; - trials: TrialResponse[]; - best_trials: TrialResponse[]; - intersection_search_space: SearchSpaceItem[]; - union_search_space: SearchSpaceItem[]; - union_user_attrs: AttributeSpec[]; - has_intermediate_values: boolean; - note: Note; - is_preferential: boolean; - objective_names?: string[]; - form_widgets?: FormWidgets; - preferences?: [number, number][]; - preference_history?: PreferenceHistoryResponse[]; - feedback_component_type: FeedbackComponentType; - skipped_trial_numbers?: number[] -} - -export const getStudyDetailAPI = ( - studyId: number, - nLocalTrials: number -): Promise => { - return requestAPI( - `/api/studies/${studyId}/?after=${nLocalTrials}`, - { - method: 'GET' - } - ).then(res => { - const trials = res.trials.map((trial): Trial => { - return convertTrialResponse(trial); - }); - const best_trials = res.best_trials.map((trial): Trial => { - return convertTrialResponse(trial); - }); - return { - id: studyId, - name: res.name, - datetime_start: new Date(res.datetime_start), - directions: res.directions, - user_attrs: res.user_attrs, - trials: trials, - best_trials: best_trials, - union_search_space: res.union_search_space, - intersection_search_space: res.intersection_search_space, - union_user_attrs: res.union_user_attrs, - has_intermediate_values: res.has_intermediate_values, - note: res.note, - objective_names: res.objective_names, - form_widgets: res.form_widgets, - is_preferential: res.is_preferential, - feedback_component_type: res.feedback_component_type, - preferences: res.preferences, - preference_history: res.preference_history?.map( - convertPreferenceHistory - ), - skipped_trial_numbers: res.skipped_trial_numbers ?? [], - }; - }); -}; - -interface StudySummariesResponse { - study_summaries: { - study_id: number; - study_name: string; - directions: StudyDirection[]; - user_attrs: Attribute[]; - is_preferential: boolean; - datetime_start?: string; - }[]; -} - -export const getStudySummariesAPI = (): Promise => { - return requestAPI(`/api/studies`).then(res => { - return res.study_summaries.map((study): StudySummary => { - return { - study_id: study.study_id, - study_name: study.study_name, - directions: study.directions, - user_attrs: study.user_attrs, - is_preferential: study.is_preferential, - datetime_start: study.datetime_start - ? new Date(study.datetime_start) - : undefined - }; - }); - }); -}; - -interface CreateNewStudyResponse { - study_summary: { - study_id: number; - study_name: string; - directions: StudyDirection[]; - user_attrs: Attribute[]; - is_preferential: boolean, - datetime_start?: string; - }; -} - -export const createNewStudyAPI = ( - studyName: string, - directions: StudyDirection[] -): Promise => { - return requestAPI(`/api/studies`, { - body: JSON.stringify({ - study_name: studyName, - directions - }), - method: 'POST' - }).then(res => { - const study_summary = res.study_summary; - return { - study_id: study_summary.study_id, - study_name: study_summary.study_name, - directions: study_summary.directions, - // best_trial: undefined, - user_attrs: study_summary.user_attrs, - is_preferential: study_summary.is_preferential, - datetime_start: study_summary.datetime_start - ? new Date(study_summary.datetime_start) - : undefined - }; - }); -}; - -export const deleteStudyAPI = (studyId: number): Promise => { - return requestAPI(`/api/studies/${studyId}`, { - method: 'DELETE' - }).then(() => { - return; - }); -}; - -type RenameStudyResponse = { - study_id: number; - study_name: string; - directions: StudyDirection[]; - user_attrs: Attribute[]; - is_preferential: boolean, - datetime_start?: string; -}; - -export const renameStudyAPI = ( - studyId: number, - studyName: string -): Promise => { - return requestAPI(`/api/studies/${studyId}/rename`, { - body: JSON.stringify({ study_name: studyName }), - method: 'POST' - }).then(res => { - return { - study_id: res.study_id, - study_name: res.study_name, - directions: res.directions, - user_attrs: res.user_attrs, - is_preferential: res.is_preferential, - datetime_start: res.datetime_start - ? new Date(res.datetime_start) - : undefined - }; - }); -}; - -export const saveStudyNoteAPI = ( - studyId: number, - note: { version: number; body: string } -): Promise => { - return requestAPI(`/api/studies/${studyId}/note`, { - body: JSON.stringify(note), - method: 'PUT' - }).then(() => { - return; - }); -}; - -export const saveTrialNoteAPI = ( - studyId: number, - trialId: number, - note: { version: number; body: string } -): Promise => { - return requestAPI(`/api/studies/${studyId}/${trialId}/note`, { - body: JSON.stringify(note), - method: 'PUT' - }).then(() => { - return; - }); -}; - -type UploadArtifactAPIResponse = { - artifact_id: string; - artifacts: Artifact[]; -}; - -export const uploadArtifactAPI = ( - studyId: number, - trialId: number, - fileName: string, - dataUrl: string -): Promise => { - return requestAPI( - `/api/artifacts/${studyId}/${trialId}`, - { - body: JSON.stringify({ - file: dataUrl, - filename: fileName - }), - method: 'POST' - } - ).then(res => { - return res; - }); -}; - -export const deleteArtifactAPI = ( - studyId: number, - trialId: number, - artifactId: string -): Promise => { - return requestAPI( - `/api/artifacts/${studyId}/${trialId}/${artifactId}`, - { - method: 'DELETE' - } - ).then(() => { - return; - }); -}; - -export const tellTrialAPI = ( - trialId: number, - state: TrialStateFinished, - values?: number[] -): Promise => { - const req: { state: TrialState; values?: number[] } = { - state: state, - values: values - }; - - return requestAPI(`/api/trials/${trialId}/tell`, { - body: JSON.stringify(req), - method: 'POST' - }).then(() => { - return; - }); -}; - -export const saveTrialUserAttrsAPI = ( - trialId: number, - user_attrs: { [key: string]: number | string } -): Promise => { - const req = { user_attrs: user_attrs }; - - return requestAPI(`/api/trials/${trialId}/user-attrs`, { - body: JSON.stringify(req), - method: 'POST' - }).then(() => { - return; - }); -}; - -interface ParamImportancesResponse { - param_importances: ParamImportance[][]; -} - -export const getParamImportances = ( - studyId: number -): Promise => { - return requestAPI( - `/api/studies/${studyId}/param_importances` - ).then(res => { - return res.param_importances; - }); -}; - -export const reportPreferenceAPI = ( - studyId: number, - candidates: number[], - clicked: number -): Promise => { - return requestAPI(`/api/studies/${studyId}/preference`, { - body: JSON.stringify({ - candidates: candidates, - clicked: clicked, - mode: "ChooseWorst", - }), - method: 'POST' - }).then(() => { - return - }); -} - -export const skipPreferentialTrialAPI = ( - studyId: number, - trialId: number -): Promise => { - return requestAPI(`/api/studies/${studyId}/${trialId}/skip`, { - method: 'POST' - }).then(() => { - return - }) -} - -export const removePreferentialHistoryAPI = ( - studyId: number, - historyUuid: string -): Promise => { - return requestAPI(`/api/studies/${studyId}/preference/${historyUuid}`,{ - method: 'DELETE' - }).then(() => { - return - }) -} - -export const restorePreferentialHistoryAPI = ( - studyId: number, - historyUuid: string -): Promise => { - return requestAPI(`/api/studies/${studyId}/preference/${historyUuid}`,{ - method: 'POST' - }).then(() => { - return - }) -} - -export const reportFeedbackComponentAPI = ( - studyId: number, - component_type: FeedbackComponentType -): Promise => { - return requestAPI( - `/api/studies/${studyId}/preference_feedback_component`, { - body: JSON.stringify({ component_type: component_type }), + getMetaInfo = () => requestAPI(`/api/meta`).then(res => res); + getStudyDetail = (studyId: number, nLocalTrials: number): Promise => requestAPI( + `/api/studies/${studyId}/?after=${nLocalTrials}`, + { + method: 'GET' + } + ).then(res => { + const trials = res.trials.map((trial): Trial => { + return this.convertTrialResponse(trial); + }); + const best_trials = res.best_trials.map((trial): Trial => { + return this.convertTrialResponse(trial); + }); + return { + id: studyId, + name: res.name, + datetime_start: new Date(res.datetime_start), + directions: res.directions, + user_attrs: res.user_attrs, + trials: trials, + best_trials: best_trials, + union_search_space: res.union_search_space, + intersection_search_space: res.intersection_search_space, + union_user_attrs: res.union_user_attrs, + has_intermediate_values: res.has_intermediate_values, + note: res.note, + objective_names: res.objective_names, + form_widgets: res.form_widgets, + is_preferential: res.is_preferential, + feedback_component_type: res.feedback_component_type, + preferences: res.preferences, + preference_history: res.preference_history?.map( + this.convertPreferenceHistory + ), + plotly_graph_objects: res.plotly_graph_objects, // TODO: Support this + artifacts: res.artifacts, // TODO: Support this + skipped_trial_numbers: res.skipped_trial_numbers ?? [], + }; + }); + getStudySummaries = (): Promise => requestAPI(`/api/studies`).then(res => { + return res.study_summaries.map((study): StudySummary => { + return { + study_id: study.study_id, + study_name: study.study_name, + directions: study.directions, + user_attrs: study.user_attrs, + is_preferential: study.is_preferential, + datetime_start: study.datetime_start + ? new Date(study.datetime_start) + : undefined + }; + }); + }); + createNewStudy = (studyName: string, directions: Optuna.StudyDirection[]): Promise => requestAPI(`/api/studies`, { + body: JSON.stringify({ + study_name: studyName, + directions + }), method: 'POST' + }).then(res => { + const study_summary = res.study_summary; + return { + study_id: study_summary.study_id, + study_name: study_summary.study_name, + directions: study_summary.directions, + // best_trial: undefined, + user_attrs: study_summary.user_attrs, + is_preferential: study_summary.is_preferential, + datetime_start: study_summary.datetime_start + ? new Date(study_summary.datetime_start) + : undefined + }; + }); + deleteStudy = (studyId: number, removeAssociatedArtifacts: boolean): Promise => requestAPI(`/api/studies/${studyId}`, { + method: 'DELETE' + }).then(() => { + return; + }); + renameStudy = (studyId: number, studyName: string): Promise => requestAPI(`/api/studies/${studyId}/rename`, { + body: JSON.stringify({ study_name: studyName }), + method: 'POST' + }).then(res => { + return { + study_id: res.study_id, + study_name: res.study_name, + directions: res.directions, + user_attrs: res.user_attrs, + is_preferential: res.is_prefential, // TODO: Fix typo + datetime_start: res.datetime_start + ? new Date(res.datetime_start) + : undefined + }; + }); + saveStudyNote = (studyId: number, note: { version: number, body:string }): Promise => requestAPI(`/api/studies/${studyId}/note`, { + body: JSON.stringify(note), + method: 'PUT' + }).then(() => { + return; + }); + saveTrialNote = (studyId: number, trialId: number, note: { version: number, body: string }): Promise => requestAPI(`/api/studies/${studyId}/${trialId}/note`, { + body: JSON.stringify(note), + method: 'PUT' + }).then(() => { + return; + }); + uploadTrialArtifact = ( + studyId: number, + trialId: number, + fileName: string, + dataUrl: string + ): Promise => requestAPI( + `/api/artifacts/${studyId}/${trialId}`, // TODO: Make API + { + body: JSON.stringify({ + file: dataUrl, + filename: fileName + }), + method: 'POST' + } + ).then(res => { + return res; + }); + uploadStudyArtifact = ( + studyId: number, + fileName: string, + dataUrl: string + ): Promise => requestAPI( + `/api/artifacts/${studyId}`, // TODO: Make API + { + body: JSON.stringify({ + file: dataUrl, + filename: fileName + }), + method: 'POST' + } + ).then(res => { + return res; + }); + deleteTrialArtifact = ( + studyId: number, + trialId: number, + artifactId: string + ): Promise => requestAPI( + `/api/artifacts/${studyId}/${trialId}/${artifactId}`, // TODO: Make API + { + method: 'DELETE' + } + ).then(() => { + return; + }); + deleteStudyArtifact = (studyId: number, artifactId: string): Promise => requestAPI( + `/api/artifacts/${studyId}/${artifactId}`, // TODO: Make API + { + method: 'DELETE' + } + ).then(() => { + return; + }); + tellTrial = async (trialId: number, state: Optuna.TrialStateFinished, values?: number[]): Promise => { + const req: { state: Optuna.TrialState; values?: number[] } = { + state: state, + values: values + }; + + await requestAPI(`/api/trials/${trialId}/tell`, { + body: JSON.stringify(req), + method: 'POST' + }); } - ).then(() => { - return - }) -} + saveTrialUserAttrs = async (trialId: number, user_attrs: { [key: string]: number | string }): Promise => { + const req = { user_attrs: user_attrs }; + + await requestAPI(`/api/trials/${trialId}/user-attrs`, { + body: JSON.stringify(req), + method: 'POST' + }); + return; + } + getParamImportances = (studyId: number): Promise => requestAPI( + `/api/studies/${studyId}/param_importances` + ).then(res => { + return res.param_importances; + }); + reportPreference = (studyId: number, candidates: number[], clicked: number): Promise => requestAPI(`/api/studies/${studyId}/preference`, { + body: JSON.stringify({ + candidates: candidates, + clicked: clicked, + mode: "ChooseWorst", + }), + method: 'POST' + }).then(() => { + return + }); + skipPreferentialTrial = (studyId: number, trialId: number): Promise => requestAPI(`/api/studies/${studyId}/${trialId}/skip`, { + method: 'POST' + }).then(() => { + return + }); + removePreferentialHistory = (studyId: number, historyUuid: string): Promise => requestAPI(`/api/studies/${studyId}/preference/${historyUuid}`,{ + method: 'DELETE' + }).then(() => { + return + }) + restorePreferentialHistory = (studyId: number, historyUuid: string): Promise => requestAPI(`/api/studies/${studyId}/preference/${historyUuid}`,{ + method: 'POST' + }).then(() => { + return + }) + reportFeedbackComponent = (studyId: number, component_type: FeedbackComponentType): Promise => requestAPI( + `/api/studies/${studyId}/preference_feedback_component`, { + body: JSON.stringify({ component_type: component_type }), + method: 'POST' + } + ).then(() => { + return + }) + getPlot = (studyId: number, plotType: PlotType): Promise => { + throw new Error("Method not implemented."); // TODO: Implement + } + getCompareStudiesPlot = (studyIds: number[], plotType: CompareStudiesPlotType): Promise => { + throw new Error("Method not implemented."); // TODO: Implement + } +} \ No newline at end of file diff --git a/optuna_dashboard/ts/apiClient.ts b/optuna_dashboard/ts/apiClient.ts index f1a7ad8c..023dd1ff 100644 --- a/optuna_dashboard/ts/apiClient.ts +++ b/optuna_dashboard/ts/apiClient.ts @@ -21,7 +21,7 @@ export type APIMeta = { plotlypy_is_available: boolean } -interface TrialResponse { +export interface TrialResponse { trial_id: number study_id: number number: number @@ -41,7 +41,7 @@ interface TrialResponse { constraints: number[] } -interface PreferenceHistoryResponse { +export interface PreferenceHistoryResponse { history: { id: string candidates: number[] @@ -103,7 +103,7 @@ export type RenameStudyResponse = { study_name: string directions: Optuna.StudyDirection[] user_attrs: Optuna.Attribute[] - is_prefential: boolean + is_prefential: boolean // TODO: Fix typo datetime_start?: string } diff --git a/optuna_dashboard/ts/pkg_index.tsx b/optuna_dashboard/ts/pkg_index.tsx index c8e04aa6..6fa846b6 100644 --- a/optuna_dashboard/ts/pkg_index.tsx +++ b/optuna_dashboard/ts/pkg_index.tsx @@ -1,5 +1,66 @@ -import { APIClientProvider } from "./apiClientProvider" -import { AxiosClient } from "./axiosClient" -import { App } from "./components/App" - -export { AxiosClient, APIClientProvider, App } +import { + APIClient, + APIMeta, + CompareStudiesPlotType, + CreateNewStudyResponse, + ParamImportancesResponse, + PlotResponse, + PlotType, + PreferenceHistoryResponse, + RenameStudyResponse, + StudyDetailResponse, + StudySummariesResponse, + TrialResponse, + UploadArtifactAPIResponse, + } from "./apiClient" + import { APIClientProvider } from "./apiClientProvider" + import { AxiosClient } from "./axiosClient" + import { App } from "./components/App" + import { + Artifact, + FeedbackComponentType, + FormWidgets, + Note, + ParamImportance, + PlotlyGraphObject, + PreferenceFeedbackMode, + PreferenceHistory, + SearchSpaceItem, + StudyDetail, + StudySummary, + Trial, + TrialParam, + } from "./types/optuna" + + export { + AxiosClient, + APIClientProvider, + App, + APIClient, + Artifact, + FeedbackComponentType, + FormWidgets, + Note, + PlotlyGraphObject, + PreferenceFeedbackMode, + PreferenceHistory, + SearchSpaceItem, + TrialResponse, + PreferenceHistoryResponse, + StudyDetailResponse, + StudySummariesResponse, + CreateNewStudyResponse, + RenameStudyResponse, + UploadArtifactAPIResponse, + ParamImportancesResponse, + APIMeta, + StudyDetail, + StudySummary, + Trial, + TrialParam, + ParamImportance, + CompareStudiesPlotType, + PlotType, + PlotResponse, + } + \ No newline at end of file From 52f7d62215d1007650a8610c1d2cd0efd9edb028 Mon Sep 17 00:00:00 2001 From: porink0424 Date: Wed, 10 Jul 2024 18:15:35 +0900 Subject: [PATCH 08/22] Add APIClientProvider to widget --- jupyterlab/src/widget.tsx | 10 +++++++++- 1 file changed, 9 insertions(+), 1 deletion(-) diff --git a/jupyterlab/src/widget.tsx b/jupyterlab/src/widget.tsx index d30ecf9d..3a7d207e 100644 --- a/jupyterlab/src/widget.tsx +++ b/jupyterlab/src/widget.tsx @@ -1,6 +1,10 @@ import { ReactWidget } from '@jupyterlab/ui-components'; import React from 'react'; import { JupyterLabEntrypoint } from './components/JupyterLabEntrypoint'; +import { JupyterlabAPIClient } from './apiClient'; +import { APIClientProvider } from '@optuna/optuna-dashboard'; + +const jupyterlabAPIClient = new JupyterlabAPIClient(); export class OptunaDashboardWidget extends ReactWidget { constructor() { @@ -9,6 +13,10 @@ export class OptunaDashboardWidget extends ReactWidget { } render(): JSX.Element { - return ; + return ( + + + + ); } } From 003c5ffed4b8a6664826e1b7b373e8eb6eabd247 Mon Sep 17 00:00:00 2001 From: porink0424 Date: Wed, 10 Jul 2024 18:17:59 +0900 Subject: [PATCH 09/22] Delete license line in pyproject.toml --- jupyterlab/pyproject.toml | 1 - 1 file changed, 1 deletion(-) diff --git a/jupyterlab/pyproject.toml b/jupyterlab/pyproject.toml index 201f68f3..5e5468f3 100644 --- a/jupyterlab/pyproject.toml +++ b/jupyterlab/pyproject.toml @@ -5,7 +5,6 @@ build-backend = "hatchling.build" [project] name = "jupyterlab-optuna" readme = "README.md" -license = { file = "LICENSE" } requires-python = ">=3.8" classifiers = [ "Framework :: Jupyter", From 5338857249c0325bddcd047e41f80714eebf80e6 Mon Sep 17 00:00:00 2001 From: porink0424 Date: Wed, 10 Jul 2024 18:31:49 +0900 Subject: [PATCH 10/22] Yarn add link --- jupyterlab/package.json | 6 ++++-- 1 file changed, 4 insertions(+), 2 deletions(-) diff --git a/jupyterlab/package.json b/jupyterlab/package.json index 1f8bc101..b2543a9c 100644 --- a/jupyterlab/package.json +++ b/jupyterlab/package.json @@ -57,13 +57,14 @@ "@mui/icons-material": "^5.11.6", "@mui/lab": "^5.0.0-alpha.128", "@mui/material": "^5.12.1", + "@optuna/optuna-dashboard": "link:../optuna_dashboard", "@types/chroma-js": "^2.4.1", "@types/signals": "^1.0.2", "elkjs": "^0.8.2", "ngl": "^2.1.1", "notistack": "^3.0.1", "plotly.js-dist-min": "^2.22.0", - "react": "^18.2.0", + "react": "link:../tslib/react/node_modules/react", "react-dom": "^18.2.0", "react-markdown": "^8.0.4", "react-router-dom": "6.11.0", @@ -76,9 +77,10 @@ }, "devDependencies": { "@jupyterlab/builder": "^4.0.0", + "@optuna/types": "link:../tslib/types", "@types/json-schema": "^7.0.11", "@types/plotly.js": "^2.12.11", - "@types/react": "^18.0.26", + "@types/react": "link:../tslib/react/node_modules/@types/react", "@types/react-dom": "^18.0.10", "@types/react-syntax-highlighter": "^15.5.5", "css-loader": "^6.8.1", From 199016aa93bed5d8eb596ec078f0259bf1f9b308 Mon Sep 17 00:00:00 2001 From: c-bata Date: Fri, 12 Jul 2024 10:55:45 +0900 Subject: [PATCH 11/22] Fix editable install of jupyterlab --- jupyterlab/.gitignore | 4 + jupyterlab/img/optuna_logo.svg | 6 + .../src/components/JupyterLabEntrypoint.tsx | 2 +- jupyterlab/yarn.lock | 4293 ++++++++++++----- optuna_dashboard/package.json | 2 +- optuna_dashboard/tsconfig.pkg.json | 2 +- 6 files changed, 3073 insertions(+), 1236 deletions(-) create mode 100644 jupyterlab/img/optuna_logo.svg diff --git a/jupyterlab/.gitignore b/jupyterlab/.gitignore index a37591db..a41ad11e 100644 --- a/jupyterlab/.gitignore +++ b/jupyterlab/.gitignore @@ -1,2 +1,6 @@ .yarn/ jupyterlab_optuna/labextension +jupyterlab_optuna/_version.py +lib/ +tsconfig.tsbuildinfo +.yarnrc.yml diff --git a/jupyterlab/img/optuna_logo.svg b/jupyterlab/img/optuna_logo.svg new file mode 100644 index 00000000..2af233df --- /dev/null +++ b/jupyterlab/img/optuna_logo.svg @@ -0,0 +1,6 @@ + + + + + + diff --git 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porink0424 Date: Wed, 7 Aug 2024 13:56:13 +0900 Subject: [PATCH 13/22] Apply formatter --- jupyterlab/src/apiClient.ts | 523 ++++++++++++++----------- jupyterlab/src/components/Debounce.tsx | 37 +- jupyterlab/src/handler.ts | 30 +- jupyterlab/src/index.ts | 69 ++-- jupyterlab/src/types/index.d.ts | 8 +- jupyterlab/src/widget.tsx | 18 +- 6 files changed, 380 insertions(+), 305 deletions(-) diff --git a/jupyterlab/src/apiClient.ts b/jupyterlab/src/apiClient.ts index 0234f3d8..10fe5d39 100644 --- a/jupyterlab/src/apiClient.ts +++ b/jupyterlab/src/apiClient.ts @@ -1,232 +1,305 @@ -import {APIClient, APIMeta, CompareStudiesPlotType, CreateNewStudyResponse, FeedbackComponentType, ParamImportance, ParamImportancesResponse, PlotResponse, PlotType, RenameStudyResponse, StudyDetail, StudyDetailResponse, StudySummariesResponse, StudySummary, Trial, UploadArtifactAPIResponse} from "@optuna/optuna-dashboard" -import { requestAPI } from "./handler"; +import { + APIClient, + APIMeta, + CompareStudiesPlotType, + CreateNewStudyResponse, + FeedbackComponentType, + ParamImportance, + ParamImportancesResponse, + PlotResponse, + PlotType, + RenameStudyResponse, + StudyDetail, + StudyDetailResponse, + StudySummariesResponse, + StudySummary, + Trial, + UploadArtifactAPIResponse, +} from "@optuna/optuna-dashboard" import * as Optuna from "@optuna/types" +import { requestAPI } from "./handler" export class JupyterlabAPIClient extends APIClient { - constructor() { - super() - } + // biome-ignore lint/complexity/noUselessConstructor: + constructor() { + super() + } - getMetaInfo = () => requestAPI(`/api/meta`).then(res => res); - getStudyDetail = (studyId: number, nLocalTrials: number): Promise => requestAPI( - `/api/studies/${studyId}/?after=${nLocalTrials}`, - { - method: 'GET' - } - ).then(res => { - const trials = res.trials.map((trial): Trial => { - return this.convertTrialResponse(trial); - }); - const best_trials = res.best_trials.map((trial): Trial => { - return this.convertTrialResponse(trial); - }); - return { - id: studyId, - name: res.name, - datetime_start: new Date(res.datetime_start), - directions: res.directions, - user_attrs: res.user_attrs, - trials: trials, - best_trials: best_trials, - union_search_space: res.union_search_space, - intersection_search_space: res.intersection_search_space, - union_user_attrs: res.union_user_attrs, - has_intermediate_values: res.has_intermediate_values, - note: res.note, - objective_names: res.objective_names, - form_widgets: res.form_widgets, - is_preferential: res.is_preferential, - feedback_component_type: res.feedback_component_type, - preferences: res.preferences, - preference_history: res.preference_history?.map( - this.convertPreferenceHistory - ), - plotly_graph_objects: res.plotly_graph_objects, // TODO: Support this - artifacts: res.artifacts, // TODO: Support this - skipped_trial_numbers: res.skipped_trial_numbers ?? [], - }; - }); - getStudySummaries = (): Promise => requestAPI(`/api/studies`).then(res => { - return res.study_summaries.map((study): StudySummary => { - return { - study_id: study.study_id, - study_name: study.study_name, - directions: study.directions, - user_attrs: study.user_attrs, - is_preferential: study.is_preferential, - datetime_start: study.datetime_start - ? new Date(study.datetime_start) - : undefined - }; - }); - }); - createNewStudy = (studyName: string, directions: Optuna.StudyDirection[]): Promise => requestAPI(`/api/studies`, { - body: JSON.stringify({ - study_name: studyName, - directions - }), - method: 'POST' - }).then(res => { - const study_summary = res.study_summary; - return { - study_id: study_summary.study_id, - study_name: study_summary.study_name, - directions: study_summary.directions, - // best_trial: undefined, - user_attrs: study_summary.user_attrs, - is_preferential: study_summary.is_preferential, - datetime_start: study_summary.datetime_start - ? new Date(study_summary.datetime_start) - : undefined - }; - }); - deleteStudy = (studyId: number, removeAssociatedArtifacts: boolean): Promise => requestAPI(`/api/studies/${studyId}`, { - method: 'DELETE' - }).then(() => { - return; - }); - renameStudy = (studyId: number, studyName: string): Promise => requestAPI(`/api/studies/${studyId}/rename`, { - body: JSON.stringify({ study_name: studyName }), - method: 'POST' - }).then(res => { - return { - study_id: res.study_id, - study_name: res.study_name, - directions: res.directions, - user_attrs: res.user_attrs, - is_preferential: res.is_prefential, // TODO: Fix typo - datetime_start: res.datetime_start - ? new Date(res.datetime_start) - : undefined - }; - }); - saveStudyNote = (studyId: number, note: { version: number, body:string }): Promise => requestAPI(`/api/studies/${studyId}/note`, { - body: JSON.stringify(note), - method: 'PUT' - }).then(() => { - return; - }); - saveTrialNote = (studyId: number, trialId: number, note: { version: number, body: string }): Promise => requestAPI(`/api/studies/${studyId}/${trialId}/note`, { - body: JSON.stringify(note), - method: 'PUT' - }).then(() => { - return; - }); - uploadTrialArtifact = ( - studyId: number, - trialId: number, - fileName: string, - dataUrl: string - ): Promise => requestAPI( - `/api/artifacts/${studyId}/${trialId}`, // TODO: Make API - { - body: JSON.stringify({ - file: dataUrl, - filename: fileName - }), - method: 'POST' - } - ).then(res => { - return res; - }); - uploadStudyArtifact = ( - studyId: number, - fileName: string, - dataUrl: string - ): Promise => requestAPI( - `/api/artifacts/${studyId}`, // TODO: Make API - { - body: JSON.stringify({ - file: dataUrl, - filename: fileName - }), - method: 'POST' - } - ).then(res => { - return res; - }); - deleteTrialArtifact = ( - studyId: number, - trialId: number, - artifactId: string - ): Promise => requestAPI( - `/api/artifacts/${studyId}/${trialId}/${artifactId}`, // TODO: Make API - { - method: 'DELETE' - } - ).then(() => { - return; - }); - deleteStudyArtifact = (studyId: number, artifactId: string): Promise => requestAPI( - `/api/artifacts/${studyId}/${artifactId}`, // TODO: Make API - { - method: 'DELETE' - } - ).then(() => { - return; - }); - tellTrial = async (trialId: number, state: Optuna.TrialStateFinished, values?: number[]): Promise => { - const req: { state: Optuna.TrialState; values?: number[] } = { - state: state, - values: values - }; - - await requestAPI(`/api/trials/${trialId}/tell`, { - body: JSON.stringify(req), - method: 'POST' - }); + getMetaInfo = () => + requestAPI("/api/meta").then((res) => res) + getStudyDetail = ( + studyId: number, + nLocalTrials: number + ): Promise => + requestAPI( + `/api/studies/${studyId}/?after=${nLocalTrials}`, + { + method: "GET", } - saveTrialUserAttrs = async (trialId: number, user_attrs: { [key: string]: number | string }): Promise => { - const req = { user_attrs: user_attrs }; - - await requestAPI(`/api/trials/${trialId}/user-attrs`, { - body: JSON.stringify(req), - method: 'POST' - }); - return; - } - getParamImportances = (studyId: number): Promise => requestAPI( - `/api/studies/${studyId}/param_importances` - ).then(res => { - return res.param_importances; - }); - reportPreference = (studyId: number, candidates: number[], clicked: number): Promise => requestAPI(`/api/studies/${studyId}/preference`, { - body: JSON.stringify({ - candidates: candidates, - clicked: clicked, - mode: "ChooseWorst", - }), - method: 'POST' - }).then(() => { - return - }); - skipPreferentialTrial = (studyId: number, trialId: number): Promise => requestAPI(`/api/studies/${studyId}/${trialId}/skip`, { - method: 'POST' - }).then(() => { - return - }); - removePreferentialHistory = (studyId: number, historyUuid: string): Promise => requestAPI(`/api/studies/${studyId}/preference/${historyUuid}`,{ - method: 'DELETE' - }).then(() => { - return - }) - restorePreferentialHistory = (studyId: number, historyUuid: string): Promise => requestAPI(`/api/studies/${studyId}/preference/${historyUuid}`,{ - method: 'POST' - }).then(() => { - return - }) - reportFeedbackComponent = (studyId: number, component_type: FeedbackComponentType): Promise => requestAPI( - `/api/studies/${studyId}/preference_feedback_component`, { - body: JSON.stringify({ component_type: component_type }), - method: 'POST' - } - ).then(() => { - return + ).then((res) => { + const trials = res.trials.map((trial): Trial => { + return this.convertTrialResponse(trial) }) - getPlot = (studyId: number, plotType: PlotType): Promise => { - throw new Error("Method not implemented."); // TODO: Implement + const best_trials = res.best_trials.map((trial): Trial => { + return this.convertTrialResponse(trial) + }) + return { + id: studyId, + name: res.name, + datetime_start: new Date(res.datetime_start), + directions: res.directions, + user_attrs: res.user_attrs, + trials: trials, + best_trials: best_trials, + union_search_space: res.union_search_space, + intersection_search_space: res.intersection_search_space, + union_user_attrs: res.union_user_attrs, + has_intermediate_values: res.has_intermediate_values, + note: res.note, + objective_names: res.objective_names, + form_widgets: res.form_widgets, + is_preferential: res.is_preferential, + feedback_component_type: res.feedback_component_type, + preferences: res.preferences, + preference_history: res.preference_history?.map( + this.convertPreferenceHistory + ), + plotly_graph_objects: res.plotly_graph_objects, // TODO: Support this + artifacts: res.artifacts, // TODO: Support this + skipped_trial_numbers: res.skipped_trial_numbers ?? [], + } + }) + getStudySummaries = (): Promise => + requestAPI("/api/studies").then((res) => { + return res.study_summaries.map((study): StudySummary => { + return { + study_id: study.study_id, + study_name: study.study_name, + directions: study.directions, + user_attrs: study.user_attrs, + is_preferential: study.is_preferential, + datetime_start: study.datetime_start + ? new Date(study.datetime_start) + : undefined, + } + }) + }) + createNewStudy = ( + studyName: string, + directions: Optuna.StudyDirection[] + ): Promise => + requestAPI("/api/studies", { + body: JSON.stringify({ + study_name: studyName, + directions, + }), + method: "POST", + }).then((res) => { + const study_summary = res.study_summary + return { + study_id: study_summary.study_id, + study_name: study_summary.study_name, + directions: study_summary.directions, + // best_trial: undefined, + user_attrs: study_summary.user_attrs, + is_preferential: study_summary.is_preferential, + datetime_start: study_summary.datetime_start + ? new Date(study_summary.datetime_start) + : undefined, + } + }) + deleteStudy = ( + studyId: number, + removeAssociatedArtifacts: boolean + ): Promise => + requestAPI(`/api/studies/${studyId}`, { + method: "DELETE", + }).then(() => { + return + }) + renameStudy = (studyId: number, studyName: string): Promise => + requestAPI(`/api/studies/${studyId}/rename`, { + body: JSON.stringify({ study_name: studyName }), + method: "POST", + }).then((res) => { + return { + study_id: res.study_id, + study_name: res.study_name, + directions: res.directions, + user_attrs: res.user_attrs, + is_preferential: res.is_prefential, // TODO: Fix typo + datetime_start: res.datetime_start + ? new Date(res.datetime_start) + : undefined, + } + }) + saveStudyNote = ( + studyId: number, + note: { version: number; body: string } + ): Promise => + requestAPI(`/api/studies/${studyId}/note`, { + body: JSON.stringify(note), + method: "PUT", + }).then(() => { + return + }) + saveTrialNote = ( + studyId: number, + trialId: number, + note: { version: number; body: string } + ): Promise => + requestAPI(`/api/studies/${studyId}/${trialId}/note`, { + body: JSON.stringify(note), + method: "PUT", + }).then(() => { + return + }) + uploadTrialArtifact = ( + studyId: number, + trialId: number, + fileName: string, + dataUrl: string + ): Promise => + requestAPI( + `/api/artifacts/${studyId}/${trialId}`, // TODO: Make API + { + body: JSON.stringify({ + file: dataUrl, + filename: fileName, + }), + method: "POST", + } + ).then((res) => { + return res + }) + uploadStudyArtifact = ( + studyId: number, + fileName: string, + dataUrl: string + ): Promise => + requestAPI( + `/api/artifacts/${studyId}`, // TODO: Make API + { + body: JSON.stringify({ + file: dataUrl, + filename: fileName, + }), + method: "POST", + } + ).then((res) => { + return res + }) + deleteTrialArtifact = ( + studyId: number, + trialId: number, + artifactId: string + ): Promise => + requestAPI( + `/api/artifacts/${studyId}/${trialId}/${artifactId}`, // TODO: Make API + { + method: "DELETE", + } + ).then(() => { + return + }) + deleteStudyArtifact = (studyId: number, artifactId: string): Promise => + requestAPI( + `/api/artifacts/${studyId}/${artifactId}`, // TODO: Make API + { + method: "DELETE", + } + ).then(() => { + return + }) + tellTrial = async ( + trialId: number, + state: Optuna.TrialStateFinished, + values?: number[] + ): Promise => { + const req: { state: Optuna.TrialState; values?: number[] } = { + state: state, + values: values, } - getCompareStudiesPlot = (studyIds: number[], plotType: CompareStudiesPlotType): Promise => { - throw new Error("Method not implemented."); // TODO: Implement - } -} \ No newline at end of file + + await requestAPI(`/api/trials/${trialId}/tell`, { + body: JSON.stringify(req), + method: "POST", + }) + } + saveTrialUserAttrs = async ( + trialId: number, + user_attrs: { [key: string]: number | string } + ): Promise => { + const req = { user_attrs: user_attrs } + + await requestAPI(`/api/trials/${trialId}/user-attrs`, { + body: JSON.stringify(req), + method: "POST", + }) + return + } + getParamImportances = (studyId: number): Promise => + requestAPI( + `/api/studies/${studyId}/param_importances` + ).then((res) => { + return res.param_importances + }) + reportPreference = ( + studyId: number, + candidates: number[], + clicked: number + ): Promise => + requestAPI(`/api/studies/${studyId}/preference`, { + body: JSON.stringify({ + candidates: candidates, + clicked: clicked, + mode: "ChooseWorst", + }), + method: "POST", + }).then(() => { + return + }) + skipPreferentialTrial = (studyId: number, trialId: number): Promise => + requestAPI(`/api/studies/${studyId}/${trialId}/skip`, { + method: "POST", + }).then(() => { + return + }) + removePreferentialHistory = ( + studyId: number, + historyUuid: string + ): Promise => + requestAPI(`/api/studies/${studyId}/preference/${historyUuid}`, { + method: "DELETE", + }).then(() => { + return + }) + restorePreferentialHistory = ( + studyId: number, + historyUuid: string + ): Promise => + requestAPI(`/api/studies/${studyId}/preference/${historyUuid}`, { + method: "POST", + }).then(() => { + return + }) + reportFeedbackComponent = ( + studyId: number, + component_type: FeedbackComponentType + ): Promise => + requestAPI(`/api/studies/${studyId}/preference_feedback_component`, { + body: JSON.stringify({ component_type: component_type }), + method: "POST", + }).then(() => { + return + }) + getPlot = (studyId: number, plotType: PlotType): Promise => { + throw new Error("Method not implemented.") // TODO: Implement + } + getCompareStudiesPlot = ( + studyIds: number[], + plotType: CompareStudiesPlotType + ): Promise => { + throw new Error("Method not implemented.") // TODO: Implement + } +} diff --git a/jupyterlab/src/components/Debounce.tsx b/jupyterlab/src/components/Debounce.tsx index d3ff760d..5b6e37ba 100644 --- a/jupyterlab/src/components/Debounce.tsx +++ b/jupyterlab/src/components/Debounce.tsx @@ -1,28 +1,31 @@ -import React, { FC, useEffect } from 'react'; -import { TextField, TextFieldProps } from '@mui/material'; +import { TextField, TextFieldProps } from "@mui/material" +import React, { FC, useEffect } from "react" export const DebouncedInputTextField: FC<{ - onChange: (s: string, valid: boolean) => void; - delay: number; - textFieldProps: TextFieldProps; + onChange: (s: string, valid: boolean) => void + delay: number + textFieldProps: TextFieldProps }> = ({ onChange, delay, textFieldProps }) => { - const [text, setText] = React.useState(''); - const [valid, setValidity] = React.useState(true); + const [text, setText] = React.useState("") + const [valid, setValidity] = React.useState(true) + + // biome-ignore lint/correctness/useExhaustiveDependencies: useEffect(() => { const timer = setTimeout(() => { - onChange(text, valid); - }, delay); + onChange(text, valid) + }, delay) return () => { - clearTimeout(timer); - }; - }, [text, delay]); + clearTimeout(timer) + } + }, [text, delay]) + return ( { - setText(e.target.value); - setValidity(e.target.validity.valid); + onChange={(e) => { + setText(e.target.value) + setValidity(e.target.validity.valid) }} {...textFieldProps} /> - ); -}; \ No newline at end of file + ) +} diff --git a/jupyterlab/src/handler.ts b/jupyterlab/src/handler.ts index fd3bc92f..490688bb 100644 --- a/jupyterlab/src/handler.ts +++ b/jupyterlab/src/handler.ts @@ -1,6 +1,6 @@ -import { URLExt } from '@jupyterlab/coreutils'; +import { URLExt } from "@jupyterlab/coreutils" -import { ServerConnection } from '@jupyterlab/services'; +import { ServerConnection } from "@jupyterlab/services" /** * Call the API extension @@ -10,37 +10,39 @@ import { ServerConnection } from '@jupyterlab/services'; * @returns The response body interpreted as JSON */ export async function requestAPI( - endPoint = '', + endPoint = "", init: RequestInit = {} ): Promise { // Make request to Jupyter API - const settings = ServerConnection.makeSettings(); + const settings = ServerConnection.makeSettings() const requestUrl = URLExt.join( settings.baseUrl, - 'jupyterlab-optuna', // API Namespace + "jupyterlab-optuna", // API Namespace endPoint - ); + ) - let response: Response; + let response: Response try { - response = await ServerConnection.makeRequest(requestUrl, init, settings); + response = await ServerConnection.makeRequest(requestUrl, init, settings) } catch (error) { - throw new ServerConnection.NetworkError(error as any); + // biome-ignore lint/suspicious/noExplicitAny: + throw new ServerConnection.NetworkError(error as any) } - let data: any = await response.text(); + // biome-ignore lint/suspicious/noExplicitAny: + let data: any = await response.text() if (data.length > 0) { try { - data = JSON.parse(data); + data = JSON.parse(data) } catch (error) { - console.log('Not a JSON response body.', response); + console.log("Not a JSON response body.", response) } } if (!response.ok) { - throw new ServerConnection.ResponseError(response, data.message || data); + throw new ServerConnection.ResponseError(response, data.message || data) } - return data; + return data } diff --git a/jupyterlab/src/index.ts b/jupyterlab/src/index.ts index 0c58bc87..10f6eace 100644 --- a/jupyterlab/src/index.ts +++ b/jupyterlab/src/index.ts @@ -1,32 +1,29 @@ -import { - JupyterFrontEnd, - JupyterFrontEndPlugin -} from '@jupyterlab/application'; +import { JupyterFrontEnd, JupyterFrontEndPlugin } from "@jupyterlab/application" -import { ICommandPalette } from '@jupyterlab/apputils'; -import optunaLogo from '../img/optuna_logo.svg'; +import { ICommandPalette } from "@jupyterlab/apputils" +import optunaLogo from "../img/optuna_logo.svg" -import { ILauncher } from '@jupyterlab/launcher'; -import { LabIcon } from '@jupyterlab/ui-components'; +import { ILauncher } from "@jupyterlab/launcher" +import { LabIcon } from "@jupyterlab/ui-components" -import { MainAreaWidget } from '@jupyterlab/apputils'; -import { OptunaDashboardWidget } from './widget'; +import { MainAreaWidget } from "@jupyterlab/apputils" +import { OptunaDashboardWidget } from "./widget" /** * The command IDs used by the server extension plugin. */ namespace CommandIDs { - export const get = 'server:get-file'; - export const ui = 'server:dashboard-ui'; + export const get = "server:get-file" + export const ui = "server:dashboard-ui" } /** * Initialization data for the jupyterlab-optuna extension. */ const plugin: JupyterFrontEndPlugin = { - id: '@jupyterlab-examples/server-extension:plugin', + id: "@jupyterlab-examples/server-extension:plugin", description: - 'A minimal JupyterLab extension with backend and frontend parts.', + "A minimal JupyterLab extension with backend and frontend parts.", autoStart: true, optional: [ILauncher], requires: [ICommandPalette], @@ -36,34 +33,34 @@ const plugin: JupyterFrontEndPlugin = { launcher: ILauncher | null ) => { console.log( - 'JupyterLab extension @jupyterlab-examples/server-extension is activated!' - ); - console.log('ICommandPalette:', palette); + "JupyterLab extension @jupyterlab-examples/server-extension is activated!" + ) + console.log("ICommandPalette:", palette) - const { commands, shell } = app; + const { commands, shell } = app const optunaIcon = new LabIcon({ - name: 'ui-components:optuna', - svgstr: optunaLogo - }); + name: "ui-components:optuna", + svgstr: optunaLogo, + }) commands.addCommand(CommandIDs.ui, { - caption: 'Launch Optuna Dashboard', - label: 'Optuna Dashboard', - icon: args => (args['isPalette'] ? undefined : optunaIcon), + caption: "Launch Optuna Dashboard", + label: "Optuna Dashboard", + icon: (args) => (args.isPalette ? undefined : optunaIcon), execute: () => { - const content = new OptunaDashboardWidget(); - const widget = new MainAreaWidget({ content }); - widget.title.label = 'Optuna Dashboard Widget'; - widget.title.icon = optunaIcon; - shell.add(widget, 'main'); - } - }); + const content = new OptunaDashboardWidget() + const widget = new MainAreaWidget({ content }) + widget.title.label = "Optuna Dashboard Widget" + widget.title.icon = optunaIcon + shell.add(widget, "main") + }, + }) if (launcher) { launcher.add({ - command: CommandIDs.ui - }); + command: CommandIDs.ui, + }) } - } -}; + }, +} -export default plugin; +export default plugin diff --git a/jupyterlab/src/types/index.d.ts b/jupyterlab/src/types/index.d.ts index acbc20b7..81792434 100644 --- a/jupyterlab/src/types/index.d.ts +++ b/jupyterlab/src/types/index.d.ts @@ -1,4 +1,4 @@ -declare module '*.css'; -declare module '*.png'; -declare module '*.jpg'; -declare module '*.svg'; \ No newline at end of file +declare module "*.css" +declare module "*.png" +declare module "*.jpg" +declare module "*.svg" diff --git a/jupyterlab/src/widget.tsx b/jupyterlab/src/widget.tsx index 3a7d207e..5e285154 100644 --- a/jupyterlab/src/widget.tsx +++ b/jupyterlab/src/widget.tsx @@ -1,15 +1,15 @@ -import { ReactWidget } from '@jupyterlab/ui-components'; -import React from 'react'; -import { JupyterLabEntrypoint } from './components/JupyterLabEntrypoint'; -import { JupyterlabAPIClient } from './apiClient'; -import { APIClientProvider } from '@optuna/optuna-dashboard'; +import { ReactWidget } from "@jupyterlab/ui-components" +import { APIClientProvider } from "@optuna/optuna-dashboard" +import React from "react" +import { JupyterlabAPIClient } from "./apiClient" +import { JupyterLabEntrypoint } from "./components/JupyterLabEntrypoint" -const jupyterlabAPIClient = new JupyterlabAPIClient(); +const jupyterlabAPIClient = new JupyterlabAPIClient() export class OptunaDashboardWidget extends ReactWidget { constructor() { - super(); - this.addClass('jp-react-widget'); + super() + this.addClass("jp-react-widget") } render(): JSX.Element { @@ -17,6 +17,6 @@ export class OptunaDashboardWidget extends ReactWidget { - ); + ) } } From c6919f2608f5d6f1b9bbc222759112c2b365ed9a Mon Sep 17 00:00:00 2001 From: porink0424 Date: Wed, 7 Aug 2024 15:00:35 +0900 Subject: [PATCH 14/22] Impl constantsProvider --- .../src/components/JupyterLabEntrypoint.tsx | 235 ++++++++++-------- jupyterlab/src/widget.tsx | 10 +- optuna_dashboard/ts/axiosClient.ts | 2 +- optuna_dashboard/ts/constantsProvider.tsx | 39 +++ optuna_dashboard/ts/index.tsx | 15 +- optuna_dashboard/ts/pkg_index.tsx | 131 +++++----- optuna_dashboard/ts/types/index.d.ts | 4 - 7 files changed, 245 insertions(+), 191 deletions(-) create mode 100644 optuna_dashboard/ts/constantsProvider.tsx diff --git a/jupyterlab/src/components/JupyterLabEntrypoint.tsx b/jupyterlab/src/components/JupyterLabEntrypoint.tsx index 02cd2900..91498949 100644 --- a/jupyterlab/src/components/JupyterLabEntrypoint.tsx +++ b/jupyterlab/src/components/JupyterLabEntrypoint.tsx @@ -1,27 +1,33 @@ +import RestartAltIcon from "@mui/icons-material/RestartAlt" +import StartIcon from "@mui/icons-material/Start" import { Box, Button, CssBaseline, FormControl, - Typography -} from '@mui/material'; -import CircularProgress from '@mui/material/CircularProgress'; -import RestartAltIcon from '@mui/icons-material/RestartAlt'; -import StartIcon from '@mui/icons-material/Start'; -import { SnackbarProvider, enqueueSnackbar } from 'notistack'; -import React, { - Dispatch, - FC, - SetStateAction, - useEffect, - useState -} from 'react'; -import { App } from '@optuna/optuna-dashboard'; -import { DebouncedInputTextField } from './Debounce'; -import { requestAPI } from '../handler'; + Typography, +} from "@mui/material" +import CircularProgress from "@mui/material/CircularProgress" +import { + APIClientProvider, + App, + ConstantsProvider, +} from "@optuna/optuna-dashboard" +import { SnackbarProvider, enqueueSnackbar } from "notistack" +import React, { Dispatch, FC, SetStateAction, useEffect, useState } from "react" +import { JupyterlabAPIClient } from "../apiClient" +import { requestAPI } from "../handler" +import { DebouncedInputTextField } from "./Debounce" + +const jupyterlabAPIClient = new JupyterlabAPIClient() export const JupyterLabEntrypoint: FC = () => { - const [ready, setReady] = useState(false); + const [ready, setReady] = useState(false) + const [pathName, setPathName] = useState("") + + useEffect(() => { + setPathName(window.location.pathname) + }, []) if (!ready) { return ( @@ -30,81 +36,89 @@ export const JupyterLabEntrypoint: FC = () => { { - setReady(true); + setReady(true) }} /> - ); - } else { - return ; + ) } -}; + return ( + + + + + + ) +} const JupyterLabStartWidget: FC<{ - showOptunaDashboard: () => void; + showOptunaDashboard: () => void }> = ({ showOptunaDashboard }) => { - const [loading, setLoading] = useState(true); - const [isInitialized, setIsInitialized] = useState(false); + const [loading, setLoading] = useState(true) + const [isInitialized, setIsInitialized] = useState(false) useEffect(() => { - setLoading(true); - requestAPI<{ is_initialized: boolean }>(`/api/is_initialized`, { - method: 'GET' + setLoading(true) + requestAPI<{ is_initialized: boolean }>("/api/is_initialized", { + method: "GET", }) - .then(res => { - setIsInitialized(res.is_initialized); - setLoading(false); + .then((res) => { + setIsInitialized(res.is_initialized) + setLoading(false) }) - .catch(err => { - setLoading(false); - enqueueSnackbar('Failed to check the initialized state', { - variant: 'error' - }); - console.error(err); - }); - }, []); + .catch((err) => { + setLoading(false) + enqueueSnackbar("Failed to check the initialized state", { + variant: "error", + }) + console.error(err) + }) + }, []) if (loading) { return ( - ); + ) } if (isInitialized) { return ( Continue or Reset? - + Continue with the existing storage URL and artifact path settings, or you can reset them. @@ -113,23 +127,23 @@ const JupyterLabStartWidget: FC<{ onClick={showOptunaDashboard} color="primary" startIcon={} - sx={{ margin: '8px 0', minWidth: '120px' }} + sx={{ margin: "8px 0", minWidth: "120px" }} > Continue - ); + ) } return ( @@ -137,91 +151,92 @@ const JupyterLabStartWidget: FC<{ showOptunaDashboard={showOptunaDashboard} setLoading={setLoading} /> - ); -}; + ) +} const StartDashboardForm: FC<{ - showOptunaDashboard: () => void; - setLoading: Dispatch>; + showOptunaDashboard: () => void + setLoading: Dispatch> }> = ({ showOptunaDashboard, setLoading }) => { - const [storageURL, setStorageURL] = useState(''); - const [artifactPath, setArtifactPath] = useState(''); - const [isValidURL, setIsValidURL] = useState(false); + const [storageURL, setStorageURL] = useState("") + const [artifactPath, setArtifactPath] = useState("") + const [isValidURL, setIsValidURL] = useState(false) + // biome-ignore lint/complexity/useRegexLiterals: const rfc1738Pattern = new RegExp( - `[\\w\\+]+://([^:/]*(.*)?@)?((\\[[^/]+\\]|[^/:]+)?([^/]*)?)?(/.*)?` - ); + "[\\w\\+]+://([^:/]*(.*)?@)?((\\[[^/]+\\]|[^/:]+)?([^/]*)?)?(/.*)?" + ) const handleValidateURL = (url: string): void => { - url.startsWith('redis') || url.match(rfc1738Pattern) + url.startsWith("redis") || url.match(rfc1738Pattern) ? setIsValidURL(true) - : setIsValidURL(false); - }; + : setIsValidURL(false) + } const handleCreateNewDashboard = () => { - setLoading(true); - requestAPI<{ is_initialized: boolean }>(`/api/register_dashboard_app`, { - method: 'POST', + setLoading(true) + requestAPI<{ is_initialized: boolean }>("/api/register_dashboard_app", { + method: "POST", body: JSON.stringify({ storage_url: storageURL, - artifact_path: artifactPath - }) + artifact_path: artifactPath, + }), }) - .then(res => { - setLoading(false); - showOptunaDashboard(); + .then((res) => { + setLoading(false) + showOptunaDashboard() }) - .catch(err => { - setLoading(false); - enqueueSnackbar('Failed to initialize Optuna Dashboard', { - variant: 'error' - }); - console.error(err); - }); - }; + .catch((err) => { + setLoading(false) + enqueueSnackbar("Failed to initialize Optuna Dashboard", { + variant: "error", + }) + console.error(err) + }) + } return ( Initialize Dashboard - + Please enter a storage URL and an artifact path. { - handleValidateURL(s); - setStorageURL(s); + onChange={(s) => { + handleValidateURL(s) + setStorageURL(s) }} delay={500} textFieldProps={{ autoFocus: true, fullWidth: true, - label: 'Storage URL', - type: 'text', - sx: { margin: '8px 0' } + label: "Storage URL", + type: "text", + sx: { margin: "8px 0" }, }} /> { - setArtifactPath(s); + onChange={(s) => { + setArtifactPath(s) }} delay={500} textFieldProps={{ fullWidth: true, - label: 'Artifact path (Optional)', - type: 'text', - sx: { margin: '8px 0' } + label: "Artifact path (Optional)", + type: "text", + sx: { margin: "8px 0" }, }} /> @@ -230,10 +245,10 @@ const StartDashboardForm: FC<{ onClick={handleCreateNewDashboard} color="primary" disabled={!isValidURL} - sx={{ margin: '8px 0' }} + sx={{ margin: "8px 0" }} > Create - ); -}; + ) +} diff --git a/jupyterlab/src/widget.tsx b/jupyterlab/src/widget.tsx index 5e285154..dea0c0d5 100644 --- a/jupyterlab/src/widget.tsx +++ b/jupyterlab/src/widget.tsx @@ -1,11 +1,7 @@ import { ReactWidget } from "@jupyterlab/ui-components" -import { APIClientProvider } from "@optuna/optuna-dashboard" import React from "react" -import { JupyterlabAPIClient } from "./apiClient" import { JupyterLabEntrypoint } from "./components/JupyterLabEntrypoint" -const jupyterlabAPIClient = new JupyterlabAPIClient() - export class OptunaDashboardWidget extends ReactWidget { constructor() { super() @@ -13,10 +9,6 @@ export class OptunaDashboardWidget extends ReactWidget { } render(): JSX.Element { - return ( - - - - ) + return } } diff --git a/optuna_dashboard/ts/axiosClient.ts b/optuna_dashboard/ts/axiosClient.ts index bb2b811a..af2eda97 100644 --- a/optuna_dashboard/ts/axiosClient.ts +++ b/optuna_dashboard/ts/axiosClient.ts @@ -24,7 +24,7 @@ import { export class AxiosClient extends APIClient { private axiosInstance: AxiosInstance - constructor() { + constructor(API_ENDPOINT: string | undefined) { super() this.axiosInstance = axios.create({ baseURL: API_ENDPOINT }) } diff --git a/optuna_dashboard/ts/constantsProvider.tsx b/optuna_dashboard/ts/constantsProvider.tsx new file mode 100644 index 00000000..8d25e7b9 --- /dev/null +++ b/optuna_dashboard/ts/constantsProvider.tsx @@ -0,0 +1,39 @@ +import React from "react" + +type ConstantsContextType = { + APP_BAR_TITLE: string + API_ENDPOINT?: string + URL_PREFIX: string +} + +export const ConstantsContext = React.createContext< + ConstantsContextType | undefined +>(undefined) + +export const useConstants = (): ConstantsContextType => { + const context = React.useContext(ConstantsContext) + if (context === undefined) { + throw new Error("useConstants must be used within a ConstantsProvider.") + } + return context +} + +export function ConstantsProvider({ + APP_BAR_TITLE, + API_ENDPOINT, + URL_PREFIX, + children, +}: { + APP_BAR_TITLE: string + API_ENDPOINT?: string + URL_PREFIX: string + children: React.ReactNode +}) { + return ( + + {children} + + ) +} diff --git a/optuna_dashboard/ts/index.tsx b/optuna_dashboard/ts/index.tsx index 9fe11370..319be5a7 100644 --- a/optuna_dashboard/ts/index.tsx +++ b/optuna_dashboard/ts/index.tsx @@ -3,13 +3,24 @@ import ReactDOM from "react-dom/client" import { APIClientProvider } from "./apiClientProvider" import { AxiosClient } from "./axiosClient" import { App } from "./components/App" +import { ConstantsProvider } from "./constantsProvider" -const axiosAPIClient = new AxiosClient() +declare const APP_BAR_TITLE: string +declare const API_ENDPOINT: string +declare const URL_PREFIX: string + +const axiosAPIClient = new AxiosClient(API_ENDPOINT) ReactDOM.createRoot(document.getElementById("dashboard") as HTMLElement).render( - + + + ) diff --git a/optuna_dashboard/ts/pkg_index.tsx b/optuna_dashboard/ts/pkg_index.tsx index 6fa846b6..97667189 100644 --- a/optuna_dashboard/ts/pkg_index.tsx +++ b/optuna_dashboard/ts/pkg_index.tsx @@ -1,66 +1,67 @@ import { - APIClient, - APIMeta, - CompareStudiesPlotType, - CreateNewStudyResponse, - ParamImportancesResponse, - PlotResponse, - PlotType, - PreferenceHistoryResponse, - RenameStudyResponse, - StudyDetailResponse, - StudySummariesResponse, - TrialResponse, - UploadArtifactAPIResponse, - } from "./apiClient" - import { APIClientProvider } from "./apiClientProvider" - import { AxiosClient } from "./axiosClient" - import { App } from "./components/App" - import { - Artifact, - FeedbackComponentType, - FormWidgets, - Note, - ParamImportance, - PlotlyGraphObject, - PreferenceFeedbackMode, - PreferenceHistory, - SearchSpaceItem, - StudyDetail, - StudySummary, - Trial, - TrialParam, - } from "./types/optuna" - - export { - AxiosClient, - APIClientProvider, - App, - APIClient, - Artifact, - FeedbackComponentType, - FormWidgets, - Note, - PlotlyGraphObject, - PreferenceFeedbackMode, - PreferenceHistory, - SearchSpaceItem, - TrialResponse, - PreferenceHistoryResponse, - StudyDetailResponse, - StudySummariesResponse, - CreateNewStudyResponse, - RenameStudyResponse, - UploadArtifactAPIResponse, - ParamImportancesResponse, - APIMeta, - StudyDetail, - StudySummary, - Trial, - TrialParam, - ParamImportance, - CompareStudiesPlotType, - PlotType, - PlotResponse, - } - \ No newline at end of file + APIClient, + APIMeta, + CompareStudiesPlotType, + CreateNewStudyResponse, + ParamImportancesResponse, + PlotResponse, + PlotType, + PreferenceHistoryResponse, + RenameStudyResponse, + StudyDetailResponse, + StudySummariesResponse, + TrialResponse, + UploadArtifactAPIResponse, +} from "./apiClient" +import { APIClientProvider } from "./apiClientProvider" +import { AxiosClient } from "./axiosClient" +import { App } from "./components/App" +import { ConstantsProvider } from "./constantsProvider" +import { + Artifact, + FeedbackComponentType, + FormWidgets, + Note, + ParamImportance, + PlotlyGraphObject, + PreferenceFeedbackMode, + PreferenceHistory, + SearchSpaceItem, + StudyDetail, + StudySummary, + Trial, + TrialParam, +} from "./types/optuna" + +export { + AxiosClient, + APIClientProvider, + App, + APIClient, + ConstantsProvider, + Artifact, + FeedbackComponentType, + FormWidgets, + Note, + PlotlyGraphObject, + PreferenceFeedbackMode, + PreferenceHistory, + SearchSpaceItem, + TrialResponse, + PreferenceHistoryResponse, + StudyDetailResponse, + StudySummariesResponse, + CreateNewStudyResponse, + RenameStudyResponse, + UploadArtifactAPIResponse, + ParamImportancesResponse, + APIMeta, + StudyDetail, + StudySummary, + Trial, + TrialParam, + ParamImportance, + CompareStudiesPlotType, + PlotType, + PlotResponse, +} diff --git a/optuna_dashboard/ts/types/index.d.ts b/optuna_dashboard/ts/types/index.d.ts index 9175a554..81792434 100644 --- a/optuna_dashboard/ts/types/index.d.ts +++ b/optuna_dashboard/ts/types/index.d.ts @@ -2,7 +2,3 @@ declare module "*.css" declare module "*.png" declare module "*.jpg" declare module "*.svg" - -declare const APP_BAR_TITLE: string -declare const API_ENDPOINT: string -declare const URL_PREFIX: string From cdd528294bfd022fe06076d0b67c5bc8749fec46 Mon Sep 17 00:00:00 2001 From: porink0424 Date: Wed, 7 Aug 2024 15:02:22 +0900 Subject: [PATCH 15/22] Use useConstants to get URL_PREFIX --- jupyterlab/yarn.lock | 70 +++++++++---------- optuna_dashboard/ts/components/App.tsx | 5 +- optuna_dashboard/ts/components/AppDrawer.tsx | 3 + .../ts/components/BestTrialsCard.tsx | 3 + .../ts/components/CompareStudies.tsx | 11 ++- .../ts/components/GraphHistory.tsx | 3 + .../ts/components/GraphParetoFront.tsx | 3 + .../ts/components/StudyDetail.tsx | 3 + optuna_dashboard/ts/components/StudyList.tsx | 3 + optuna_dashboard/ts/components/TrialList.tsx | 29 ++++++-- optuna_dashboard/ts/components/TrialTable.tsx | 3 + 11 files changed, 91 insertions(+), 45 deletions(-) diff --git a/jupyterlab/yarn.lock b/jupyterlab/yarn.lock index 97b5a50e..65e6855d 100644 --- a/jupyterlab/yarn.lock +++ b/jupyterlab/yarn.lock @@ -281,21 +281,21 @@ __metadata: linkType: hard "@floating-ui/core@npm:^1.6.0": - version: 1.6.5 - resolution: "@floating-ui/core@npm:1.6.5" + version: 1.6.6 + resolution: "@floating-ui/core@npm:1.6.6" dependencies: - "@floating-ui/utils": ^0.2.5 - checksum: 8e6c62a6e9223fba9afbcaca8afe408788a2bc8ab1b2f5734a26d5b02d4017a2baffc7176a938a610fd243e6a983ada605f259b35c88813e2230dd29906a78fd + "@floating-ui/utils": ^0.2.6 + checksum: 3992e93f40655798bff7a721258cd9f2ad4d98eca9e29ecbf3dc79154a191f47fbab3d86777fecc08e83fdc64a9f390a5256f3cf10543db87f177863770ddeeb languageName: node linkType: hard "@floating-ui/dom@npm:^1.0.0": - version: 1.6.8 - resolution: "@floating-ui/dom@npm:1.6.8" + version: 1.6.9 + resolution: "@floating-ui/dom@npm:1.6.9" dependencies: "@floating-ui/core": ^1.6.0 - "@floating-ui/utils": ^0.2.5 - checksum: bab6954bdde69afeaf8dbbf335818fe710c6eae1c62856ae1e09fa6abdc056bf5995e053638b76fa6661b8384c363ca2af874ab0448c3f6943808f4f8f77f3ea + "@floating-ui/utils": ^0.2.6 + checksum: a440cd5057616835d3e4a0e3143d500486d11021ace699b3154033c09a88c4db721b6cbd25f922c8c77fa3956f22b7c801ae0495f9fd9b54f8d91356f231c9d1 languageName: node linkType: hard @@ -311,10 +311,10 @@ __metadata: languageName: node linkType: hard -"@floating-ui/utils@npm:^0.2.5": - version: 0.2.5 - resolution: "@floating-ui/utils@npm:0.2.5" - checksum: 32834fe0fec5ee89187f8defd0b10813d725dab7dc6ed1545ded6655630bac5d438f0c991d019d675585e118846f12391236fc2886a5c73a57576e7de3eca3f9 +"@floating-ui/utils@npm:^0.2.6": + version: 0.2.6 + resolution: "@floating-ui/utils@npm:0.2.6" + checksum: 4350edad705f69f944f853d95b2832fbf3d6ff2347276526198040ddec03a7e4afae0b5863d50373275dd319ae648c8070fd528405a1a10a1620277534846792 languageName: node linkType: hard @@ -1805,20 +1805,20 @@ __metadata: linkType: hard "@types/node@npm:*": - version: 22.0.2 - resolution: "@types/node@npm:22.0.2" + version: 22.1.0 + resolution: "@types/node@npm:22.1.0" dependencies: - undici-types: ~6.11.1 - checksum: a83d7e9c81ddc5e58050b61413e871e68468f127367172fa4c14ba3182f8548be59e045096619a4742d665c38790d9843b71664ec61c0ec4ba59c771a739eded + undici-types: ~6.13.0 + checksum: 3544c35da06009790a2e07742a7dfa0ac0f0d64ec47d9e6d3edf0ff6dcfc1a7cc2efdc5e524e80f8ed80aa37154513b2c1c724f95146ff89fc5aefb8e33575f2 languageName: node linkType: hard "@types/node@npm:^18.19.42": - version: 18.19.42 - resolution: "@types/node@npm:18.19.42" + version: 18.19.43 + resolution: "@types/node@npm:18.19.43" dependencies: undici-types: ~5.26.4 - checksum: 3f976583d3f4ff6040187f98e838337d59134e53bfe1cf241d8143e87e6f9507a1ad0aa435ea550c21d76c6cabb78f63a410413de476764f45695378cc022377 + checksum: 5eb9045aae6da86e8ad297381f93d29d2e7fcd4ed0c53670d9dff1e7b714920f8bbe5ee456289c19fc69c510ac197bdbacc7a785eaeba0afb9cb5d634a64bcd3 languageName: node linkType: hard @@ -2500,9 +2500,9 @@ __metadata: linkType: hard "caniuse-lite@npm:^1.0.30001646": - version: 1.0.30001646 - resolution: "caniuse-lite@npm:1.0.30001646" - checksum: 53d45b990d21036aaab7547e164174a0ac9a117acdd14a6c33822c4983e2671b1df48686d5383002d0ef158b208b0047a7dc404312a6229bf8ee629de3351b44 + version: 1.0.30001649 + resolution: "caniuse-lite@npm:1.0.30001649" + checksum: 7952512a243f22c942e0e99249def19d781ad1900db101f2d8de9d83de37db000a7dc7f226c9c99134001975e22852becf1677539c24c7ecae53467b681c400f languageName: node linkType: hard @@ -3232,9 +3232,9 @@ __metadata: linkType: hard "electron-to-chromium@npm:^1.5.4": - 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version: 8.4.40 - resolution: "postcss@npm:8.4.40" + version: 8.4.41 + resolution: "postcss@npm:8.4.41" dependencies: nanoid: ^3.3.7 picocolors: ^1.0.1 source-map-js: ^1.2.0 - checksum: afd0cc49d2169dcd96c0f17e155c5d75de048956306a3017f1cfa6a7d66b941592245bed20f7796ceeccb2d8967749b623be2c7b010a74f67ea10fb5bdb8ba28 + checksum: f865894929eb0f7fc2263811cc853c13b1c75103028b3f4f26df777e27b201f1abe21cb4aa4c2e901c80a04f6fb325ee22979688fe55a70e2ea82b0a517d3b6f languageName: node linkType: hard @@ -7847,10 +7847,10 @@ __metadata: languageName: node linkType: hard -"undici-types@npm:~6.11.1": - version: 6.11.1 - resolution: "undici-types@npm:6.11.1" - checksum: d7fc11bded93bc55ef3b88464e856ab061a747cf50ef2eff5df5ba3be18b9fcafe60e1b36a8c99e28aac2eade12891d32a504f2a32422452c44662e598e3b188 +"undici-types@npm:~6.13.0": + version: 6.13.0 + resolution: "undici-types@npm:6.13.0" + checksum: 9d0ef6bf58994bebbea6a4ab75f381c69a89a7ed151bfbae0d4ef95450d56502c9eccb323abf17b7d099c1d9c1cbae62e909e4dfeb8d204612d2f1fdada24707 languageName: node linkType: hard diff --git a/optuna_dashboard/ts/components/App.tsx b/optuna_dashboard/ts/components/App.tsx index c915f7c7..7171b62a 100644 --- a/optuna_dashboard/ts/components/App.tsx +++ b/optuna_dashboard/ts/components/App.tsx @@ -8,11 +8,12 @@ import { import blue from "@mui/material/colors/blue" import pink from "@mui/material/colors/pink" import { SnackbarProvider } from "notistack" -import React, { FC, useMemo, useState, useEffect } from "react" +import React, { useMemo, useState, useEffect, FC } from "react" import { BrowserRouter as Router, Route, Routes } from "react-router-dom" import { RecoilRoot } from "recoil" import { QueryClient, QueryClientProvider } from "@tanstack/react-query" +import { useConstants } from "../constantsProvider" import { CompareStudies } from "./CompareStudies" import { StudyDetail } from "./StudyDetail" import { StudyList } from "./StudyList" @@ -49,6 +50,8 @@ export const App: FC = () => { setColorMode(colorMode === "dark" ? "light" : "dark") } + const { URL_PREFIX } = useConstants() + return ( diff --git a/optuna_dashboard/ts/components/AppDrawer.tsx b/optuna_dashboard/ts/components/AppDrawer.tsx index 59fb48d1..a37896c1 100644 --- a/optuna_dashboard/ts/components/AppDrawer.tsx +++ b/optuna_dashboard/ts/components/AppDrawer.tsx @@ -41,6 +41,7 @@ import QueryStatsIcon from "@mui/icons-material/QueryStats" import ThumbUpAltIcon from "@mui/icons-material/ThumbUpAlt" import { Switch } from "@mui/material" import { actionCreator } from "../action" +import { useConstants } from "../constantsProvider" const drawerWidth = 240 @@ -129,6 +130,8 @@ export const AppDrawer: FC<{ toolbar: React.ReactNode children?: React.ReactNode }> = ({ studyId, toggleColorMode, page, toolbar, children }) => { + const { URL_PREFIX } = useConstants() + const theme = useTheme() const action = actionCreator() const [open, setOpen] = useRecoilState(drawerOpenState) diff --git a/optuna_dashboard/ts/components/BestTrialsCard.tsx b/optuna_dashboard/ts/components/BestTrialsCard.tsx index 650344ac..69291b0e 100644 --- a/optuna_dashboard/ts/components/BestTrialsCard.tsx +++ b/optuna_dashboard/ts/components/BestTrialsCard.tsx @@ -15,6 +15,7 @@ import { import React, { FC, ReactNode, useMemo } from "react" import { Link } from "react-router-dom" import { StudyDetail, Trial } from "ts/types/optuna" +import { useConstants } from "../constantsProvider" const useBestTrials = (studyDetail: StudyDetail | null): Trial[] => { return useMemo(() => studyDetail?.best_trials || [], [studyDetail]) @@ -23,6 +24,8 @@ const useBestTrials = (studyDetail: StudyDetail | null): Trial[] => { export const BestTrialsCard: FC<{ studyDetail: StudyDetail | null }> = ({ studyDetail }) => { + const { URL_PREFIX } = useConstants() + const theme = useTheme() const bestTrials = useBestTrials(studyDetail) diff --git a/optuna_dashboard/ts/components/CompareStudies.tsx b/optuna_dashboard/ts/components/CompareStudies.tsx index 49f62b97..34360a38 100644 --- a/optuna_dashboard/ts/components/CompareStudies.tsx +++ b/optuna_dashboard/ts/components/CompareStudies.tsx @@ -28,6 +28,7 @@ import { useRecoilValue } from "recoil" import { useNavigate } from "react-router-dom" import { StudyDetails, StudySummary } from "ts/types/optuna" import { actionCreator } from "../action" +import { useConstants } from "../constantsProvider" import { studyDetailsState, studySummariesState } from "../state" import { useQuery } from "../urlQuery" import { AppDrawer } from "./AppDrawer" @@ -51,7 +52,7 @@ const useQueriedStudies = ( }, [studies, query]) } -const getStudyListLink = (ids: number[]): string => { +const getStudyListLink = (ids: number[], URL_PREFIX: string): string => { const base = URL_PREFIX + "/compare-studies" if (ids.length > 0) { return base + "?ids=" + ids.map((n) => n.toString()).join(",") @@ -75,6 +76,8 @@ const isEqualDirections = ( export const CompareStudies: FC<{ toggleColorMode: () => void }> = ({ toggleColorMode }) => { + const { URL_PREFIX } = useConstants() + const { enqueueSnackbar } = useSnackbar() const theme = useTheme() const query = useQuery() @@ -186,9 +189,11 @@ export const CompareStudies: FC<{ next = [...selectedIds, study.study_id] } } - navigate(getStudyListLink(next)) + navigate(getStudyListLink(next, URL_PREFIX)) } else { - navigate(getStudyListLink([study.study_id])) + navigate( + getStudyListLink([study.study_id], URL_PREFIX) + ) } }} selected={ diff --git a/optuna_dashboard/ts/components/GraphHistory.tsx b/optuna_dashboard/ts/components/GraphHistory.tsx index 52dd7397..1ec502f2 100644 --- a/optuna_dashboard/ts/components/GraphHistory.tsx +++ b/optuna_dashboard/ts/components/GraphHistory.tsx @@ -23,6 +23,7 @@ import * as plotly from "plotly.js-dist-min" import React, { ChangeEvent, FC, useEffect, useState } from "react" import { useNavigate } from "react-router-dom" import { StudyDetail } from "ts/types/optuna" +import { useConstants } from "../constantsProvider" import { usePlotlyColorTheme } from "../state" const plotDomId = "graph-history" @@ -39,6 +40,8 @@ export const GraphHistory: FC<{ logScale: boolean includePruned: boolean }> = ({ studies, logScale, includePruned }) => { + const { URL_PREFIX } = useConstants() + const theme = useTheme() const colorTheme = usePlotlyColorTheme(theme.palette.mode) const navigate = useNavigate() diff --git a/optuna_dashboard/ts/components/GraphParetoFront.tsx b/optuna_dashboard/ts/components/GraphParetoFront.tsx index b0687895..2e0237da 100644 --- a/optuna_dashboard/ts/components/GraphParetoFront.tsx +++ b/optuna_dashboard/ts/components/GraphParetoFront.tsx @@ -15,6 +15,7 @@ import React, { FC, useEffect, useState } from "react" import { useNavigate } from "react-router-dom" import { StudyDetail, Trial } from "ts/types/optuna" import { PlotType } from "../apiClient" +import { useConstants } from "../constantsProvider" import { makeHovertext } from "../graphUtil" import { usePlot } from "../hooks/usePlot" import { usePlotlyColorTheme } from "../state" @@ -61,6 +62,8 @@ const GraphParetoFrontBackend: FC<{ const GraphParetoFrontFrontend: FC<{ study: StudyDetail | null }> = ({ study = null }) => { + const { URL_PREFIX } = useConstants() + const theme = useTheme() const colorTheme = usePlotlyColorTheme(theme.palette.mode) const navigate = useNavigate() diff --git a/optuna_dashboard/ts/components/StudyDetail.tsx b/optuna_dashboard/ts/components/StudyDetail.tsx index f49f2839..53fc4389 100644 --- a/optuna_dashboard/ts/components/StudyDetail.tsx +++ b/optuna_dashboard/ts/components/StudyDetail.tsx @@ -14,6 +14,7 @@ import { Link, useParams } from "react-router-dom" import { useRecoilValue } from "recoil" import { actionCreator } from "../action" +import { useConstants } from "../constantsProvider" import { reloadIntervalState, useStudyDetailValue, @@ -49,6 +50,8 @@ export const StudyDetail: FC<{ toggleColorMode: () => void page: PageId }> = ({ toggleColorMode, page }) => { + const { URL_PREFIX } = useConstants() + const theme = useTheme() const action = actionCreator() const studyId = useURLVars() diff --git a/optuna_dashboard/ts/components/StudyList.tsx b/optuna_dashboard/ts/components/StudyList.tsx index 30374d0d..ca689c9b 100644 --- a/optuna_dashboard/ts/components/StudyList.tsx +++ b/optuna_dashboard/ts/components/StudyList.tsx @@ -34,6 +34,7 @@ import { useRecoilValue } from "recoil" import { styled } from "@mui/system" import { StudySummary } from "ts/types/optuna" import { actionCreator } from "../action" +import { useConstants } from "../constantsProvider" import { studySummariesLoadingState, studySummariesState } from "../state" import { useQuery } from "../urlQuery" import { AppDrawer } from "./AppDrawer" @@ -44,6 +45,8 @@ import { useRenameStudyDialog } from "./RenameStudyDialog" export const StudyList: FC<{ toggleColorMode: () => void }> = ({ toggleColorMode }) => { + const { URL_PREFIX } = useConstants() + const theme = useTheme() const action = actionCreator() diff --git a/optuna_dashboard/ts/components/TrialList.tsx b/optuna_dashboard/ts/components/TrialList.tsx index 3762dabf..606aa08a 100644 --- a/optuna_dashboard/ts/components/TrialList.tsx +++ b/optuna_dashboard/ts/components/TrialList.tsx @@ -27,6 +27,7 @@ import { useNavigate } from "react-router-dom" import { useRecoilValue } from "recoil" import { FormWidgets, StudyDetail, Trial } from "ts/types/optuna" import { actionCreator } from "../action" +import { useConstants } from "../constantsProvider" import { artifactIsAvailable } from "../state" import { useQuery } from "../urlQuery" import { TrialArtifactCards } from "./Artifact/TrialArtifactCards" @@ -312,7 +313,8 @@ export const TrialListDetail: FC<{ const getTrialListLink = ( studyId: number, exclude: Optuna.TrialState[], - numbers: number[] + numbers: number[], + URL_PREFIX: string ): string => { const base = URL_PREFIX + `/studies/${studyId}/trials` if (exclude.length > 0 && numbers.length > 0) { @@ -333,6 +335,8 @@ const getTrialListLink = ( export const TrialList: FC<{ studyDetail: StudyDetail | null }> = ({ studyDetail, }) => { + const { URL_PREFIX } = useConstants() + const theme = useTheme() const query = useQuery() const navigate = useNavigate() @@ -417,7 +421,12 @@ export const TrialList: FC<{ studyDetail: StudyDetail | null }> = ({ } const numbers = selected.map((t) => t.number) navigate( - getTrialListLink(studyDetail.id, excludedStates, numbers) + getTrialListLink( + studyDetail.id, + excludedStates, + numbers, + URL_PREFIX + ) ) }} disabled={trialCounts[i] === 0} @@ -476,13 +485,21 @@ export const TrialList: FC<{ studyDetail: StudyDetail | null }> = ({ next = [...selectedNumbers, trial.number] } navigate( - getTrialListLink(trial.study_id, excludedStates, next) + getTrialListLink( + trial.study_id, + excludedStates, + next, + URL_PREFIX + ) ) } else { navigate( - getTrialListLink(trial.study_id, excludedStates, [ - trial.number, - ]) + getTrialListLink( + trial.study_id, + excludedStates, + [trial.number], + URL_PREFIX + ) ) } }} diff --git a/optuna_dashboard/ts/components/TrialTable.tsx b/optuna_dashboard/ts/components/TrialTable.tsx index df62cf97..a45d56e3 100644 --- a/optuna_dashboard/ts/components/TrialTable.tsx +++ b/optuna_dashboard/ts/components/TrialTable.tsx @@ -14,6 +14,7 @@ import { Row, createColumnHelper, } from "@tanstack/react-table" +import { useConstants } from "../constantsProvider" const multiValueFilter: FilterFn = ( row: Row, @@ -27,6 +28,8 @@ const multiValueFilter: FilterFn = ( export const TrialTable: FC<{ studyDetail: StudyDetail | null }> = ({ studyDetail }) => { + const { URL_PREFIX } = useConstants() + const theme = useTheme() const trials: Trial[] = studyDetail !== null ? studyDetail.trials : [] const objectiveNames: string[] = studyDetail?.objective_names || [] From 159b6bfa9384c25b2ae73d375100c0b60cca6093 Mon Sep 17 00:00:00 2001 From: porink0424 Date: Wed, 7 Aug 2024 15:43:10 +0900 Subject: [PATCH 16/22] Organize TODOs --- jupyterlab/src/apiClient.ts | 26 +++++++++++++++----------- optuna_dashboard/ts/apiClient.ts | 2 +- 2 files changed, 16 insertions(+), 12 deletions(-) diff --git a/jupyterlab/src/apiClient.ts b/jupyterlab/src/apiClient.ts index 10fe5d39..eeae643e 100644 --- a/jupyterlab/src/apiClient.ts +++ b/jupyterlab/src/apiClient.ts @@ -64,8 +64,8 @@ export class JupyterlabAPIClient extends APIClient { preference_history: res.preference_history?.map( this.convertPreferenceHistory ), - plotly_graph_objects: res.plotly_graph_objects, // TODO: Support this - artifacts: res.artifacts, // TODO: Support this + plotly_graph_objects: res.plotly_graph_objects, + artifacts: res.artifacts, skipped_trial_numbers: res.skipped_trial_numbers ?? [], } }) @@ -127,7 +127,7 @@ export class JupyterlabAPIClient extends APIClient { study_name: res.study_name, directions: res.directions, user_attrs: res.user_attrs, - is_preferential: res.is_prefential, // TODO: Fix typo + is_preferential: res.is_prefential, datetime_start: res.datetime_start ? new Date(res.datetime_start) : undefined, @@ -161,7 +161,7 @@ export class JupyterlabAPIClient extends APIClient { dataUrl: string ): Promise => requestAPI( - `/api/artifacts/${studyId}/${trialId}`, // TODO: Make API + `/api/artifacts/${studyId}/${trialId}`, { body: JSON.stringify({ file: dataUrl, @@ -178,7 +178,7 @@ export class JupyterlabAPIClient extends APIClient { dataUrl: string ): Promise => requestAPI( - `/api/artifacts/${studyId}`, // TODO: Make API + `/api/artifacts/${studyId}`, { body: JSON.stringify({ file: dataUrl, @@ -195,7 +195,7 @@ export class JupyterlabAPIClient extends APIClient { artifactId: string ): Promise => requestAPI( - `/api/artifacts/${studyId}/${trialId}/${artifactId}`, // TODO: Make API + `/api/artifacts/${studyId}/${trialId}/${artifactId}`, { method: "DELETE", } @@ -204,7 +204,7 @@ export class JupyterlabAPIClient extends APIClient { }) deleteStudyArtifact = (studyId: number, artifactId: string): Promise => requestAPI( - `/api/artifacts/${studyId}/${artifactId}`, // TODO: Make API + `/api/artifacts/${studyId}/${artifactId}`, { method: "DELETE", } @@ -293,13 +293,17 @@ export class JupyterlabAPIClient extends APIClient { }).then(() => { return }) - getPlot = (studyId: number, plotType: PlotType): Promise => { - throw new Error("Method not implemented.") // TODO: Implement - } + getPlot = (studyId: number, plotType: PlotType): Promise => + requestAPI(`/api/studies/${studyId}/plot/${plotType}`) + .then((res) => (res)) getCompareStudiesPlot = ( studyIds: number[], plotType: CompareStudiesPlotType ): Promise => { - throw new Error("Method not implemented.") // TODO: Implement + return requestAPI( + `/api/compare-studies/plot/${plotType}`, { + body: JSON.stringify({ study_ids: studyIds }), + } + ).then((res) => (res)) } } diff --git a/optuna_dashboard/ts/apiClient.ts b/optuna_dashboard/ts/apiClient.ts index 023dd1ff..90f6b22c 100644 --- a/optuna_dashboard/ts/apiClient.ts +++ b/optuna_dashboard/ts/apiClient.ts @@ -103,7 +103,7 @@ export type RenameStudyResponse = { study_name: string directions: Optuna.StudyDirection[] user_attrs: Optuna.Attribute[] - is_prefential: boolean // TODO: Fix typo + is_prefential: boolean // TODO(porink0424): Fix typo datetime_start?: string } From 899be970ada5518b027b7d04acddba384769e660 Mon Sep 17 00:00:00 2001 From: porink0424 Date: Wed, 7 Aug 2024 16:14:05 +0900 Subject: [PATCH 17/22] Make the code pass lint checking --- .eslintignore | 4 +- jupyterlab/jupyterlab_optuna/__init__.py | 3 +- jupyterlab/jupyterlab_optuna/handlers.py | 4 +- jupyterlab/src/apiClient.ts | 53 ++++++++----------- .../src/components/JupyterLabEntrypoint.tsx | 2 +- 5 files changed, 32 insertions(+), 34 deletions(-) diff --git a/.eslintignore b/.eslintignore index dc0d7b3e..9227e18b 100644 --- a/.eslintignore +++ b/.eslintignore @@ -2,4 +2,6 @@ venv .venv standalone_app vscode -tslib \ No newline at end of file +tslib +jupyterlab +pkg \ No newline at end of file diff --git a/jupyterlab/jupyterlab_optuna/__init__.py b/jupyterlab/jupyterlab_optuna/__init__.py index 5d693c0e..6ee653e6 100644 --- a/jupyterlab/jupyterlab_optuna/__init__.py +++ b/jupyterlab/jupyterlab_optuna/__init__.py @@ -3,7 +3,8 @@ try: except ImportError: # Fallback when using the package in dev mode without installing # in editable mode with pip. It is highly recommended to install - # the package from a stable release or in editable mode: https://pip.pypa.io/en/stable/topics/local-project-installs/#editable-installs + # the package from a stable release or in editable mode: + # https://pip.pypa.io/en/stable/topics/local-project-installs/#editable-installs import warnings warnings.warn("Importing 'jupyterlab_optuna' outside a proper installation.") __version__ = "dev" diff --git a/jupyterlab/jupyterlab_optuna/handlers.py b/jupyterlab/jupyterlab_optuna/handlers.py index 65e409d8..f8713372 100644 --- a/jupyterlab/jupyterlab_optuna/handlers.py +++ b/jupyterlab/jupyterlab_optuna/handlers.py @@ -4,10 +4,11 @@ import json import threading from typing import TYPE_CHECKING -import tornado from jupyter_server.base.handlers import APIHandler from jupyter_server.utils import url_path_join from optuna_dashboard.artifact._backend_to_store import to_artifact_store +import tornado + try: from optuna.artifacts import FileSystemArtifactStore @@ -19,6 +20,7 @@ from optuna_dashboard import wsgi from tornado.web import FallbackHandler from tornado.wsgi import WSGIContainer + if TYPE_CHECKING: from _typeshed.wsgi import WSGIApplication diff --git a/jupyterlab/src/apiClient.ts b/jupyterlab/src/apiClient.ts index eeae643e..7f004c42 100644 --- a/jupyterlab/src/apiClient.ts +++ b/jupyterlab/src/apiClient.ts @@ -114,6 +114,9 @@ export class JupyterlabAPIClient extends APIClient { ): Promise => requestAPI(`/api/studies/${studyId}`, { method: "DELETE", + body: JSON.stringify({ + remove_associated_artifacts: removeAssociatedArtifacts, + }), }).then(() => { return }) @@ -177,16 +180,13 @@ export class JupyterlabAPIClient extends APIClient { fileName: string, dataUrl: string ): Promise => - requestAPI( - `/api/artifacts/${studyId}`, - { - body: JSON.stringify({ - file: dataUrl, - filename: fileName, - }), - method: "POST", - } - ).then((res) => { + requestAPI(`/api/artifacts/${studyId}`, { + body: JSON.stringify({ + file: dataUrl, + filename: fileName, + }), + method: "POST", + }).then((res) => { return res }) deleteTrialArtifact = ( @@ -194,21 +194,15 @@ export class JupyterlabAPIClient extends APIClient { trialId: number, artifactId: string ): Promise => - requestAPI( - `/api/artifacts/${studyId}/${trialId}/${artifactId}`, - { - method: "DELETE", - } - ).then(() => { + requestAPI(`/api/artifacts/${studyId}/${trialId}/${artifactId}`, { + method: "DELETE", + }).then(() => { return }) deleteStudyArtifact = (studyId: number, artifactId: string): Promise => - requestAPI( - `/api/artifacts/${studyId}/${artifactId}`, - { - method: "DELETE", - } - ).then(() => { + requestAPI(`/api/artifacts/${studyId}/${artifactId}`, { + method: "DELETE", + }).then(() => { return }) tellTrial = async ( @@ -293,17 +287,16 @@ export class JupyterlabAPIClient extends APIClient { }).then(() => { return }) - getPlot = (studyId: number, plotType: PlotType): Promise => - requestAPI(`/api/studies/${studyId}/plot/${plotType}`) - .then((res) => (res)) + getPlot = (studyId: number, plotType: PlotType): Promise => + requestAPI( + `/api/studies/${studyId}/plot/${plotType}` + ).then((res) => res) getCompareStudiesPlot = ( studyIds: number[], plotType: CompareStudiesPlotType ): Promise => { - return requestAPI( - `/api/compare-studies/plot/${plotType}`, { - body: JSON.stringify({ study_ids: studyIds }), - } - ).then((res) => (res)) + return requestAPI(`/api/compare-studies/plot/${plotType}`, { + body: JSON.stringify({ study_ids: studyIds }), + }).then((res) => res) } } diff --git a/jupyterlab/src/components/JupyterLabEntrypoint.tsx b/jupyterlab/src/components/JupyterLabEntrypoint.tsx index 91498949..46dee6c4 100644 --- a/jupyterlab/src/components/JupyterLabEntrypoint.tsx +++ b/jupyterlab/src/components/JupyterLabEntrypoint.tsx @@ -182,7 +182,7 @@ const StartDashboardForm: FC<{ artifact_path: artifactPath, }), }) - .then((res) => { + .then((_res) => { setLoading(false) showOptunaDashboard() }) From ddc68706634a308b5cf639ef61bffbcbf53d518c Mon Sep 17 00:00:00 2001 From: porink0424 Date: Wed, 7 Aug 2024 16:30:54 +0900 Subject: [PATCH 18/22] Apply formatter --- Makefile | 2 +- jupyterlab/jupyterlab_optuna/__init__.py | 12 ++++-------- jupyterlab/jupyterlab_optuna/handlers.py | 3 +-- 3 files changed, 6 insertions(+), 11 deletions(-) diff --git a/Makefile b/Makefile index f44ce36a..f0fe5624 100644 --- a/Makefile +++ b/Makefile @@ -52,7 +52,7 @@ docs: docs/conf.py $(RST_FILES) .PHONY: fmt fmt: npm run fmt - black ./optuna_dashboard/ ./python_tests/ ./e2e_tests/ + black ./optuna_dashboard/ ./python_tests/ ./e2e_tests/ ./jupyterlab/ isort . .PHONY: clean diff --git a/jupyterlab/jupyterlab_optuna/__init__.py b/jupyterlab/jupyterlab_optuna/__init__.py index 6ee653e6..735c3493 100644 --- a/jupyterlab/jupyterlab_optuna/__init__.py +++ b/jupyterlab/jupyterlab_optuna/__init__.py @@ -3,25 +3,21 @@ try: except ImportError: # Fallback when using the package in dev mode without installing # in editable mode with pip. It is highly recommended to install - # the package from a stable release or in editable mode: + # the package from a stable release or in editable mode: # https://pip.pypa.io/en/stable/topics/local-project-installs/#editable-installs import warnings + warnings.warn("Importing 'jupyterlab_optuna' outside a proper installation.") __version__ = "dev" from .handlers import setup_handlers def _jupyter_labextension_paths(): - return [{ - "src": "labextension", - "dest": "jupyterlab-optuna" - }] + return [{"src": "labextension", "dest": "jupyterlab-optuna"}] def _jupyter_server_extension_points(): - return [{ - "module": "jupyterlab_optuna" - }] + return [{"module": "jupyterlab_optuna"}] def _load_jupyter_server_extension(server_app): diff --git a/jupyterlab/jupyterlab_optuna/handlers.py b/jupyterlab/jupyterlab_optuna/handlers.py index f8713372..d5cd463f 100644 --- a/jupyterlab/jupyterlab_optuna/handlers.py +++ b/jupyterlab/jupyterlab_optuna/handlers.py @@ -13,8 +13,7 @@ import tornado try: from optuna.artifacts import FileSystemArtifactStore except ImportError: - from optuna_dashboard.artifact.file_system import \ - FileSystemBackend as FileSystemArtifactStore + from optuna_dashboard.artifact.file_system import FileSystemBackend as FileSystemArtifactStore from optuna_dashboard import wsgi from tornado.web import FallbackHandler From a7f715cb0035393c848c41d57d7946c15f9c93e9 Mon Sep 17 00:00:00 2001 From: c-bata Date: Wed, 7 Aug 2024 23:00:06 +0900 Subject: [PATCH 19/22] Fix jupyterlab extension build --- jupyterlab/.gitignore | 3 +++ jupyterlab/src/apiClient.ts | 3 +-- jupyterlab/yarn.lock | 36 +++++++++++++++---------------- optuna_dashboard/ts/pkg_index.tsx | 2 -- 4 files changed, 22 insertions(+), 22 deletions(-) diff --git a/jupyterlab/.gitignore b/jupyterlab/.gitignore index a41ad11e..40446a06 100644 --- a/jupyterlab/.gitignore +++ b/jupyterlab/.gitignore @@ -4,3 +4,6 @@ jupyterlab_optuna/_version.py lib/ tsconfig.tsbuildinfo .yarnrc.yml +.pnp.cjs +.pnp.loader.mjs + diff --git a/jupyterlab/src/apiClient.ts b/jupyterlab/src/apiClient.ts index 7f004c42..2bf4faf7 100644 --- a/jupyterlab/src/apiClient.ts +++ b/jupyterlab/src/apiClient.ts @@ -4,7 +4,6 @@ import { CompareStudiesPlotType, CreateNewStudyResponse, FeedbackComponentType, - ParamImportance, ParamImportancesResponse, PlotResponse, PlotType, @@ -232,7 +231,7 @@ export class JupyterlabAPIClient extends APIClient { }) return } - getParamImportances = (studyId: number): Promise => + getParamImportances = (studyId: number): Promise => requestAPI( `/api/studies/${studyId}/param_importances` ).then((res) => { diff --git a/jupyterlab/yarn.lock b/jupyterlab/yarn.lock index 65e6855d..e4b5988c 100644 --- a/jupyterlab/yarn.lock +++ b/jupyterlab/yarn.lock @@ -281,21 +281,21 @@ __metadata: linkType: hard "@floating-ui/core@npm:^1.6.0": - version: 1.6.6 - resolution: "@floating-ui/core@npm:1.6.6" + version: 1.6.7 + resolution: "@floating-ui/core@npm:1.6.7" dependencies: - "@floating-ui/utils": ^0.2.6 - checksum: 3992e93f40655798bff7a721258cd9f2ad4d98eca9e29ecbf3dc79154a191f47fbab3d86777fecc08e83fdc64a9f390a5256f3cf10543db87f177863770ddeeb + "@floating-ui/utils": ^0.2.7 + checksum: ff940c228f7c4f95138c4979ba1c1122d804cac55e514c889cbdb9f76d5bebbd0f7a02ae1d468b66a9e728343d5a79430845781230e012560b4719fdde458461 languageName: node linkType: hard "@floating-ui/dom@npm:^1.0.0": - version: 1.6.9 - resolution: "@floating-ui/dom@npm:1.6.9" + version: 1.6.10 + resolution: "@floating-ui/dom@npm:1.6.10" dependencies: "@floating-ui/core": ^1.6.0 - "@floating-ui/utils": ^0.2.6 - checksum: a440cd5057616835d3e4a0e3143d500486d11021ace699b3154033c09a88c4db721b6cbd25f922c8c77fa3956f22b7c801ae0495f9fd9b54f8d91356f231c9d1 + "@floating-ui/utils": ^0.2.7 + checksum: dc86989f1b7dc00f2786e2aa369e7c26c7c63c8c5bad0ba9bede0e45df4b9699c6908b0405c92701bcde69e21a4a582d29dc5d1c924ed8d5fe072dfc777558c7 languageName: node linkType: hard @@ -311,10 +311,10 @@ __metadata: languageName: node linkType: hard -"@floating-ui/utils@npm:^0.2.6": - version: 0.2.6 - resolution: "@floating-ui/utils@npm:0.2.6" - checksum: 4350edad705f69f944f853d95b2832fbf3d6ff2347276526198040ddec03a7e4afae0b5863d50373275dd319ae648c8070fd528405a1a10a1620277534846792 +"@floating-ui/utils@npm:^0.2.7": + version: 0.2.7 + resolution: "@floating-ui/utils@npm:0.2.7" + checksum: 7e6707c4c6d496f86377a97aac0232926953a2da9c2058ed79d8b44031038ef8fcf9743dac7b38c1da7148460194da987814d78af801ec5c278abf9b303adb22 languageName: node linkType: hard @@ -2500,9 +2500,9 @@ __metadata: linkType: hard "caniuse-lite@npm:^1.0.30001646": - version: 1.0.30001649 - resolution: "caniuse-lite@npm:1.0.30001649" - checksum: 7952512a243f22c942e0e99249def19d781ad1900db101f2d8de9d83de37db000a7dc7f226c9c99134001975e22852becf1677539c24c7ecae53467b681c400f + version: 1.0.30001650 + resolution: "caniuse-lite@npm:1.0.30001650" + checksum: 4892c25200aef4dca83feba232bb0d4c1dbbdffb3376394c1be7e75a6be686010e88bc2172cb5cf8dafa5e5de08dc8e7870c4fe97dae3d615979a7be5a091db7 languageName: node linkType: hard @@ -7637,8 +7637,8 @@ __metadata: linkType: hard "terser@npm:^5.26.0": - version: 5.31.3 - resolution: "terser@npm:5.31.3" + version: 5.31.4 + resolution: "terser@npm:5.31.4" dependencies: "@jridgewell/source-map": ^0.3.3 acorn: ^8.8.2 @@ -7646,7 +7646,7 @@ __metadata: source-map-support: ~0.5.20 bin: terser: bin/terser - checksum: cb4ccd5cb42c719272959dcae63d41e4696fb304123392943282caa6dfcdc49f94e7c48353af8bcd4fbc34457b240b7f843db7fec21bb2bdc18e01d4f45b035e + checksum: c134d2e964af3ff1b7c93d10756ffbc1f754b800ca115fb33cec72db16e5338f74c2fc6f8b5ac7f7770b187f3958e82a3e746110a2d9a8b1d91abaf3c91639a7 languageName: node linkType: hard diff --git a/optuna_dashboard/ts/pkg_index.tsx b/optuna_dashboard/ts/pkg_index.tsx index 97667189..303a0efa 100644 --- a/optuna_dashboard/ts/pkg_index.tsx +++ b/optuna_dashboard/ts/pkg_index.tsx @@ -22,7 +22,6 @@ import { FeedbackComponentType, FormWidgets, Note, - ParamImportance, PlotlyGraphObject, PreferenceFeedbackMode, PreferenceHistory, @@ -60,7 +59,6 @@ export { StudySummary, Trial, TrialParam, - ParamImportance, CompareStudiesPlotType, PlotType, PlotResponse, From 963e58a11652bf4ede4807511aec34409c4626e5 Mon Sep 17 00:00:00 2001 From: c-bata Date: Thu, 8 Aug 2024 00:59:02 +0900 Subject: [PATCH 20/22] Fix scrolling issue of jupyter lab --- Makefile | 5 +++ jupyterlab/src/apiClient.ts | 4 +- .../src/components/JupyterLabEntrypoint.tsx | 12 +++--- optuna_dashboard/ts/components/App.tsx | 20 +++++----- optuna_dashboard/ts/components/AppDrawer.tsx | 29 +++++++++----- .../ts/components/BestTrialsCard.tsx | 6 +-- .../ts/components/CompareStudies.tsx | 8 ++-- .../ts/components/GraphHistory.tsx | 4 +- .../ts/components/GraphParetoFront.tsx | 4 +- .../ts/components/StudyDetail.tsx | 4 +- optuna_dashboard/ts/components/StudyList.tsx | 6 +-- optuna_dashboard/ts/components/TrialList.tsx | 8 ++-- optuna_dashboard/ts/components/TrialTable.tsx | 4 +- optuna_dashboard/ts/constantsProvider.tsx | 38 ++++--------------- optuna_dashboard/ts/index.tsx | 22 +++++++---- optuna_dashboard/ts/pkg_index.tsx | 4 +- optuna_dashboard/webpack.config.js | 3 -- 17 files changed, 89 insertions(+), 92 deletions(-) diff --git a/Makefile b/Makefile index f0fe5624..5ec4ef58 100644 --- a/Makefile +++ b/Makefile @@ -37,6 +37,11 @@ serve-browser-app: tslib $(RUSTLIB_OUT) vscode-extension: vscode/assets/bundle.js cd vscode && npm install && npm run vscode:prepublish && vsce package +.PHONY: jupyterlab-extension +jupyterlab-extension: tslib + cd optuna_dashboard && npm install && npm run build:pkg + cd jupyterlab && python -m build --sdist + .PHONY: sdist sdist: pyproject.toml $(DASHBOARD_TS_OUT) python -m build --sdist diff --git a/jupyterlab/src/apiClient.ts b/jupyterlab/src/apiClient.ts index 2bf4faf7..c8c0a7c7 100644 --- a/jupyterlab/src/apiClient.ts +++ b/jupyterlab/src/apiClient.ts @@ -231,7 +231,9 @@ export class JupyterlabAPIClient extends APIClient { }) return } - getParamImportances = (studyId: number): Promise => + getParamImportances = ( + studyId: number + ): Promise => requestAPI( `/api/studies/${studyId}/param_importances` ).then((res) => { diff --git a/jupyterlab/src/components/JupyterLabEntrypoint.tsx b/jupyterlab/src/components/JupyterLabEntrypoint.tsx index 46dee6c4..fdd5fb84 100644 --- a/jupyterlab/src/components/JupyterLabEntrypoint.tsx +++ b/jupyterlab/src/components/JupyterLabEntrypoint.tsx @@ -11,7 +11,7 @@ import CircularProgress from "@mui/material/CircularProgress" import { APIClientProvider, App, - ConstantsProvider, + ConstantsContext, } from "@optuna/optuna-dashboard" import { SnackbarProvider, enqueueSnackbar } from "notistack" import React, { Dispatch, FC, SetStateAction, useEffect, useState } from "react" @@ -54,14 +54,16 @@ export const JupyterLabEntrypoint: FC = () => { ) } return ( - - + ) } diff --git a/optuna_dashboard/ts/components/App.tsx b/optuna_dashboard/ts/components/App.tsx index 7171b62a..2b84e182 100644 --- a/optuna_dashboard/ts/components/App.tsx +++ b/optuna_dashboard/ts/components/App.tsx @@ -50,7 +50,7 @@ export const App: FC = () => { setColorMode(colorMode === "dark" ? "light" : "dark") } - const { URL_PREFIX } = useConstants() + const { url_prefix } = useConstants() return ( @@ -69,7 +69,7 @@ export const App: FC = () => { { } /> { } /> { } /> { } /> { } /> { } /> { } /> } /> } /> diff --git a/optuna_dashboard/ts/components/AppDrawer.tsx b/optuna_dashboard/ts/components/AppDrawer.tsx index a37896c1..8b81f93b 100644 --- a/optuna_dashboard/ts/components/AppDrawer.tsx +++ b/optuna_dashboard/ts/components/AppDrawer.tsx @@ -21,7 +21,7 @@ import ListItemIcon from "@mui/material/ListItemIcon" import ListItemText from "@mui/material/ListItemText" import Modal from "@mui/material/Modal" import Toolbar from "@mui/material/Toolbar" -import { CSSObject, Theme, styled, useTheme } from "@mui/material/styles" +import { CSSObject, SxProps, Theme, styled, useTheme } from "@mui/material/styles" import React, { FC } from "react" import { Link } from "react-router-dom" import { useRecoilState, useRecoilValue } from "recoil" @@ -130,9 +130,10 @@ export const AppDrawer: FC<{ toolbar: React.ReactNode children?: React.ReactNode }> = ({ studyId, toggleColorMode, page, toolbar, children }) => { - const { URL_PREFIX } = useConstants() + const { url_prefix } = useConstants() const theme = useTheme() + const constants = useConstants() const action = actionCreator() const [open, setOpen] = useRecoilState(drawerOpenState) const reloadInterval = useRecoilValue(reloadIntervalState) @@ -158,6 +159,14 @@ export const AppDrawer: FC<{ const styleSwitch = { display: open ? "inherit" : "none", } + const mainSx: SxProps = { + flexGrow: 1, + } + if (constants.environment === "jupyterlab") { + // 100vh - (the height of Optuna Dashboard toolbar) - (the height of JupyterLab toolbar) + mainSx.height = `calc(100vh - ${theme.mixins.toolbar.minHeight}px - 29px)` + mainSx.overflow = "auto" + } const handleDrawerOpen = () => { setOpen(true) @@ -212,7 +221,7 @@ export const AppDrawer: FC<{ @@ -233,7 +242,7 @@ export const AppDrawer: FC<{ > @@ -250,7 +259,7 @@ export const AppDrawer: FC<{ @@ -264,7 +273,7 @@ export const AppDrawer: FC<{ @@ -281,7 +290,7 @@ export const AppDrawer: FC<{ @@ -294,7 +303,7 @@ export const AppDrawer: FC<{ @@ -307,7 +316,7 @@ export const AppDrawer: FC<{ @@ -419,7 +428,7 @@ export const AppDrawer: FC<{ - + {children || null} diff --git a/optuna_dashboard/ts/components/BestTrialsCard.tsx b/optuna_dashboard/ts/components/BestTrialsCard.tsx index 69291b0e..3547e133 100644 --- a/optuna_dashboard/ts/components/BestTrialsCard.tsx +++ b/optuna_dashboard/ts/components/BestTrialsCard.tsx @@ -24,7 +24,7 @@ const useBestTrials = (studyDetail: StudyDetail | null): Trial[] => { export const BestTrialsCard: FC<{ studyDetail: StudyDetail | null }> = ({ studyDetail }) => { - const { URL_PREFIX } = useConstants() + const { url_prefix } = useConstants() const theme = useTheme() const bestTrials = useBestTrials(studyDetail) @@ -64,7 +64,7 @@ export const BestTrialsCard: FC<{ variant="outlined" startIcon={} component={Link} - to={`${URL_PREFIX}/studies/${bestTrial.study_id}/trials?numbers=${bestTrial.number}`} + to={`${url_prefix}/studies/${bestTrial.study_id}/trials?numbers=${bestTrial.number}`} sx={{ margin: theme.spacing(1) }} > Details @@ -92,7 +92,7 @@ export const BestTrialsCard: FC<{ void }> = ({ toggleColorMode }) => { - const { URL_PREFIX } = useConstants() + const { url_prefix } = useConstants() const { enqueueSnackbar } = useSnackbar() const theme = useTheme() @@ -101,7 +101,7 @@ export const CompareStudies: FC<{ <> = ({ studies, logScale, includePruned }) => { - const { URL_PREFIX } = useConstants() + const { url_prefix } = useConstants() const theme = useTheme() const colorTheme = usePlotlyColorTheme(theme.palette.mode) @@ -103,7 +103,7 @@ export const GraphHistory: FC<{ studyId = studies[Math.floor(data.points[0].curveNumber / 2)].id } navigate( - URL_PREFIX + + url_prefix + `/studies/${studyId}/trials?numbers=${data.points[0].x}` ) } diff --git a/optuna_dashboard/ts/components/GraphParetoFront.tsx b/optuna_dashboard/ts/components/GraphParetoFront.tsx index 2e0237da..41444ed5 100644 --- a/optuna_dashboard/ts/components/GraphParetoFront.tsx +++ b/optuna_dashboard/ts/components/GraphParetoFront.tsx @@ -62,7 +62,7 @@ const GraphParetoFrontBackend: FC<{ const GraphParetoFrontFrontend: FC<{ study: StudyDetail | null }> = ({ study = null }) => { - const { URL_PREFIX } = useConstants() + const { url_prefix } = useConstants() const theme = useTheme() const colorTheme = usePlotlyColorTheme(theme.palette.mode) @@ -96,7 +96,7 @@ const GraphParetoFrontFrontend: FC<{ data.points[0].text.replace(/
/g, "") ) navigate( - URL_PREFIX + + url_prefix + `/studies/${study.id}/trials?numbers=${plotTextInfo.number}` ) }) diff --git a/optuna_dashboard/ts/components/StudyDetail.tsx b/optuna_dashboard/ts/components/StudyDetail.tsx index 53fc4389..f832ec7f 100644 --- a/optuna_dashboard/ts/components/StudyDetail.tsx +++ b/optuna_dashboard/ts/components/StudyDetail.tsx @@ -50,7 +50,7 @@ export const StudyDetail: FC<{ toggleColorMode: () => void page: PageId }> = ({ toggleColorMode, page }) => { - const { URL_PREFIX } = useConstants() + const { url_prefix } = useConstants() const theme = useTheme() const action = actionCreator() @@ -226,7 +226,7 @@ export const StudyDetail: FC<{ <> void }> = ({ toggleColorMode }) => { - const { URL_PREFIX } = useConstants() + const { url_prefix } = useConstants() const theme = useTheme() const action = actionCreator() @@ -155,7 +155,7 @@ export const StudyList: FC<{ > @@ -260,7 +260,7 @@ export const StudyList: FC<{ variant="outlined" startIcon={} component={Link} - to={`${URL_PREFIX}/compare-studies`} + to={`${url_prefix}/compare-studies`} sx={{ marginRight: theme.spacing(2), minWidth: "120px" }} > Compare diff --git a/optuna_dashboard/ts/components/TrialList.tsx b/optuna_dashboard/ts/components/TrialList.tsx index 606aa08a..46da5d51 100644 --- a/optuna_dashboard/ts/components/TrialList.tsx +++ b/optuna_dashboard/ts/components/TrialList.tsx @@ -335,7 +335,7 @@ const getTrialListLink = ( export const TrialList: FC<{ studyDetail: StudyDetail | null }> = ({ studyDetail, }) => { - const { URL_PREFIX } = useConstants() + const { url_prefix } = useConstants() const theme = useTheme() const query = useQuery() @@ -425,7 +425,7 @@ export const TrialList: FC<{ studyDetail: StudyDetail | null }> = ({ studyDetail.id, excludedStates, numbers, - URL_PREFIX + url_prefix ) ) }} @@ -489,7 +489,7 @@ export const TrialList: FC<{ studyDetail: StudyDetail | null }> = ({ trial.study_id, excludedStates, next, - URL_PREFIX + url_prefix ) ) } else { @@ -498,7 +498,7 @@ export const TrialList: FC<{ studyDetail: StudyDetail | null }> = ({ trial.study_id, excludedStates, [trial.number], - URL_PREFIX + url_prefix ) ) } diff --git a/optuna_dashboard/ts/components/TrialTable.tsx b/optuna_dashboard/ts/components/TrialTable.tsx index a45d56e3..99b5e8b1 100644 --- a/optuna_dashboard/ts/components/TrialTable.tsx +++ b/optuna_dashboard/ts/components/TrialTable.tsx @@ -28,7 +28,7 @@ const multiValueFilter: FilterFn = ( export const TrialTable: FC<{ studyDetail: StudyDetail | null }> = ({ studyDetail }) => { - const { URL_PREFIX } = useConstants() + const { url_prefix } = useConstants() const theme = useTheme() const trials: Trial[] = studyDetail !== null ? studyDetail.trials : [] @@ -127,7 +127,7 @@ export const TrialTable: FC<{ (undefined) +export const ConstantsContext = React.createContext({ + environment: "optuna-dashboard", + url_prefix: "", +}) export const useConstants = (): ConstantsContextType => { - const context = React.useContext(ConstantsContext) - if (context === undefined) { - throw new Error("useConstants must be used within a ConstantsProvider.") - } - return context -} - -export function ConstantsProvider({ - APP_BAR_TITLE, - API_ENDPOINT, - URL_PREFIX, - children, -}: { - APP_BAR_TITLE: string - API_ENDPOINT?: string - URL_PREFIX: string - children: React.ReactNode -}) { - return ( - - {children} - - ) + return React.useContext(ConstantsContext) } diff --git a/optuna_dashboard/ts/index.tsx b/optuna_dashboard/ts/index.tsx index 319be5a7..66d7b1f2 100644 --- a/optuna_dashboard/ts/index.tsx +++ b/optuna_dashboard/ts/index.tsx @@ -1,24 +1,30 @@ -import React from "react" +import React, { FC, ReactNode } from "react" import ReactDOM from "react-dom/client" import { APIClientProvider } from "./apiClientProvider" import { AxiosClient } from "./axiosClient" import { App } from "./components/App" -import { ConstantsProvider } from "./constantsProvider" +import { ConstantsContext } from "./constantsProvider" -declare const APP_BAR_TITLE: string declare const API_ENDPOINT: string declare const URL_PREFIX: string const axiosAPIClient = new AxiosClient(API_ENDPOINT) +const ConstantsProvider: FC<{ children: ReactNode }> = ({ children }) => ( + + {children} + +) + ReactDOM.createRoot(document.getElementById("dashboard") as HTMLElement).render( - + diff --git a/optuna_dashboard/ts/pkg_index.tsx b/optuna_dashboard/ts/pkg_index.tsx index 303a0efa..92c220f2 100644 --- a/optuna_dashboard/ts/pkg_index.tsx +++ b/optuna_dashboard/ts/pkg_index.tsx @@ -16,7 +16,7 @@ import { import { APIClientProvider } from "./apiClientProvider" import { AxiosClient } from "./axiosClient" import { App } from "./components/App" -import { ConstantsProvider } from "./constantsProvider" +import { ConstantsContext } from "./constantsProvider" import { Artifact, FeedbackComponentType, @@ -37,7 +37,7 @@ export { APIClientProvider, App, APIClient, - ConstantsProvider, + ConstantsContext, Artifact, FeedbackComponentType, FormWidgets, diff --git a/optuna_dashboard/webpack.config.js b/optuna_dashboard/webpack.config.js index 58beed84..fe8dfbdd 100644 --- a/optuna_dashboard/webpack.config.js +++ b/optuna_dashboard/webpack.config.js @@ -54,9 +54,6 @@ var config = { }, plugins: [ new webpack.DefinePlugin({ - APP_BAR_TITLE: JSON.stringify( - process.env.APP_BAR_TITLE || "Optuna Dashboard" - ), API_ENDPOINT: JSON.stringify(process.env.API_ENDPOINT), URL_PREFIX: JSON.stringify(process.env.URL_PREFIX || "/dashboard"), }), From 0e802786a4c15b877a1d5f9a11b0d404b80a49ed Mon Sep 17 00:00:00 2001 From: c-bata Date: Thu, 8 Aug 2024 10:26:56 +0900 Subject: [PATCH 21/22] Move process to devDependencies --- optuna_dashboard/package-lock.json | 3 ++- optuna_dashboard/package.json | 2 +- 2 files changed, 3 insertions(+), 2 deletions(-) diff --git a/optuna_dashboard/package-lock.json b/optuna_dashboard/package-lock.json index 67a6b4e8..95bb2e82 100644 --- a/optuna_dashboard/package-lock.json +++ b/optuna_dashboard/package-lock.json @@ -28,7 +28,6 @@ "notistack": "^3.0.1", "papaparse": "^5.4.1", "plotly.js-dist-min": "^2.28.0", - "process": "^0.11.10", "react": "file:../tslib/react/node_modules/react", "react-dom": "^18.2.0", "react-markdown": "^9.0.1", @@ -55,6 +54,7 @@ "compression-webpack-plugin": "^11.0.0", "css-loader": "^6.9.1", "esbuild-loader": "^4.0.3", + "process": "^0.11.10", "style-loader": "^3.3.4", "ts-loader": "^9.5.1", "typescript": "^5.3.3", @@ -17781,6 +17781,7 @@ "version": "0.11.10", "resolved": "https://registry.npmjs.org/process/-/process-0.11.10.tgz", "integrity": "sha512-cdGef/drWFoydD1JsMzuFf8100nZl+GT+yacc2bEced5f9Rjk4z+WtFUTBu9PhOi9j/jfmBPu0mMEY4wIdAF8A==", + "dev": true, "engines": { "node": ">= 0.6.0" } diff --git a/optuna_dashboard/package.json b/optuna_dashboard/package.json index 71944664..b4097d55 100644 --- a/optuna_dashboard/package.json +++ b/optuna_dashboard/package.json @@ -35,7 +35,6 @@ "notistack": "^3.0.1", "papaparse": "^5.4.1", "plotly.js-dist-min": "^2.28.0", - "process": "^0.11.10", "react": "file:../tslib/react/node_modules/react", "react-dom": "^18.2.0", "react-markdown": "^9.0.1", @@ -62,6 +61,7 @@ "compression-webpack-plugin": "^11.0.0", "css-loader": "^6.9.1", "esbuild-loader": "^4.0.3", + "process": "^0.11.10", "style-loader": "^3.3.4", "ts-loader": "^9.5.1", "typescript": "^5.3.3", From cdca440ae37d297bbb63ac17ce51834d75603c85 Mon Sep 17 00:00:00 2001 From: c-bata Date: Thu, 8 Aug 2024 11:07:35 +0900 Subject: [PATCH 22/22] Fix lint errors --- optuna_dashboard/ts/components/AppDrawer.tsx | 10 ++++++++-- optuna_dashboard/ts/components/CompareStudies.tsx | 4 ++-- 2 files changed, 10 insertions(+), 4 deletions(-) diff --git a/optuna_dashboard/ts/components/AppDrawer.tsx b/optuna_dashboard/ts/components/AppDrawer.tsx index 8b81f93b..99ee0b43 100644 --- a/optuna_dashboard/ts/components/AppDrawer.tsx +++ b/optuna_dashboard/ts/components/AppDrawer.tsx @@ -21,7 +21,13 @@ import ListItemIcon from "@mui/material/ListItemIcon" import ListItemText from "@mui/material/ListItemText" import Modal from "@mui/material/Modal" import Toolbar from "@mui/material/Toolbar" -import { CSSObject, SxProps, Theme, styled, useTheme } from "@mui/material/styles" +import { + CSSObject, + SxProps, + Theme, + styled, + useTheme, +} from "@mui/material/styles" import React, { FC } from "react" import { Link } from "react-router-dom" import { useRecoilState, useRecoilValue } from "recoil" @@ -428,7 +434,7 @@ export const AppDrawer: FC<{ - + {children || null} diff --git a/optuna_dashboard/ts/components/CompareStudies.tsx b/optuna_dashboard/ts/components/CompareStudies.tsx index 2f7fbab6..0756d28a 100644 --- a/optuna_dashboard/ts/components/CompareStudies.tsx +++ b/optuna_dashboard/ts/components/CompareStudies.tsx @@ -52,8 +52,8 @@ const useQueriedStudies = ( }, [studies, query]) } -const getStudyListLink = (ids: number[], URL_PREFIX: string): string => { - const base = URL_PREFIX + "/compare-studies" +const getStudyListLink = (ids: number[], url_prefix: string): string => { + const base = url_prefix + "/compare-studies" if (ids.length > 0) { return base + "?ids=" + ids.map((n) => n.toString()).join(",") }