diff --git a/.github/workflows/e2e-dashboard-tests.yml b/.github/workflows/e2e-dashboard-tests.yml index 45258fb0..0f293273 100644 --- a/.github/workflows/e2e-dashboard-tests.yml +++ b/.github/workflows/e2e-dashboard-tests.yml @@ -23,7 +23,10 @@ jobs: - name: Setup Node uses: actions/setup-node@v2 with: - node-version: '16' + node-version: '20' + + - name: Setup tslib + run: make tslib - name: Build bundle.js working-directory: optuna_dashboard diff --git a/.github/workflows/typescript-tests.yml b/.github/workflows/typescript-tests.yml index 90f76645..01c99470 100644 --- a/.github/workflows/typescript-tests.yml +++ b/.github/workflows/typescript-tests.yml @@ -29,7 +29,7 @@ jobs: - run: npm run lint type-check: - name: Type checking on optuna-dashboard + name: Type checking on optuna-dashboard & standalone_app runs-on: ubuntu-latest steps: @@ -44,12 +44,24 @@ jobs: - name: Setup tslib run: make tslib - - name: Type Check + - name: Type Check optuna_dashboard working-directory: optuna_dashboard run: | npm install npm run type-check + - name: Build rustlib for standalone_app + working-directory: rustlib + run: | + curl https://rustwasm.github.io/wasm-pack/installer/init.sh -sSf | sh + wasm-pack build --target web + + - name: Type Check standalone_app + working-directory: standalone_app + run: | + npm install + npm run type-check + check-package-lock-json: name: Check package-lock.json runs-on: ubuntu-latest @@ -63,14 +75,14 @@ jobs: with: node-version: '20' - - working-directory: optuna_dashboard - run: npm install - working-directory: tslib/types run: npm install - working-directory: tslib/storage run: npm install - working-directory: tslib/react run: npm install + - working-directory: optuna_dashboard + run: npm install - working-directory: standalone_app run: npm install - working-directory: vscode @@ -88,7 +100,11 @@ jobs: - name: Setup Node uses: actions/setup-node@v2 with: - node-version: '16' + node-version: '20' + + - name: Setup tslib + run: make tslib + - name: Build bundle.js working-directory: optuna_dashboard run: | diff --git a/CONTRIBUTING.md b/CONTRIBUTING.md index b7a0b55f..81adb196 100644 --- a/CONTRIBUTING.md +++ b/CONTRIBUTING.md @@ -86,7 +86,13 @@ Note that `OPTUNA_DASHBOARD_DEBUG=1` makes the server will automatically restart ### Running tests, lint checks and formatters -#### Running Python unit tests +#### Running unit tests for `tslib/` + +``` +$ make tslib-test +``` + +#### Running unit tests for `python_tests/` ``` $ pytest python_tests/ @@ -147,7 +153,7 @@ Please install [wasm-pack](https://rustwasm.github.io/wasm-pack/installer/) and $ make serve-browser-app ``` -Open http://127.0.0.1:9000/ +Open http://localhost:5173/ ## VS Code Extension diff --git a/Makefile b/Makefile index 9cfcc4b5..f44ce36a 100644 --- a/Makefile +++ b/Makefile @@ -24,6 +24,11 @@ tslib: cd tslib/storage && npm i && npm run build cd tslib/react && npm i && npm run build +.PHONY: tslib-test +tslib-test: tslib + cd tslib/react/test && python generate_assets.py && npm run test + cd tslib/storage/test && python generate_assets.py && npm run test + .PHONY: serve-browser-app serve-browser-app: tslib $(RUSTLIB_OUT) cd standalone_app && npm run watch diff --git a/optuna_dashboard/_app.py b/optuna_dashboard/_app.py index c2e5099a..bdbfb168 100644 --- a/optuna_dashboard/_app.py +++ b/optuna_dashboard/_app.py @@ -180,7 +180,10 @@ def create_app( @app.delete("/api/studies/") @json_api_view def delete_study(study_id: int) -> dict[str, Any]: - if artifact_store is not None: + data = request.json or {} + remove_associated_artifacts = data.get("remove_associated_artifacts", True) + + if artifact_store is not None and remove_associated_artifacts: delete_all_artifacts(artifact_store, storage, study_id) try: diff --git a/optuna_dashboard/package-lock.json b/optuna_dashboard/package-lock.json index 7baac227..d039bfe3 100644 --- a/optuna_dashboard/package-lock.json +++ b/optuna_dashboard/package-lock.json @@ -9,21 +9,26 @@ "version": 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"plotly.js-dist-min": "^2.28.0", - "react": "^18.2.0", + "react": "file:../tslib/react/node_modules/react", "react-dom": "^18.2.0", "react-markdown": "^9.0.1", "react-router-dom": "^6.21.3", @@ -43,7 +48,7 @@ "@babel/preset-env": "^7.23.9", "@optuna/types": "../tslib/types/", "@types/plotly.js": "^2.12.32", - "@types/react": "^18.2.48", + "@types/react": "file:../tslib/react/node_modules/@types/react", "@types/react-dom": "^18.2.18", "@types/react-syntax-highlighter": "^15.5.11", "compression-webpack-plugin": "^11.0.0", @@ -56,20 +61,55 @@ "webpack-cli": "^5.1.4" } }, - "../tslib/types": { - "name": "@optuna/types", + "../tslib/react": { + "name": "@optuna/react", "version": "0.0.1", - "dev": true, "license": "MIT", + "dependencies": { + "@emotion/react": "^11.11.3", + "@emotion/styled": "^11.11.0", + "@mui/icons-material": "^5.15.10", + "@mui/lab": "^5.0.0-alpha.170", + "@mui/material": "^5.15.10", + "@mui/system": "^5.15.9", + "@optuna/storage": "file:../storage", + 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"engines": { "node": ">=6.9.0" @@ -903,14 +934,13 @@ "@babel/core": "^7.0.0-0" } }, - "node_modules/@babel/plugin-transform-class-static-block": { - "version": "7.24.4", - "resolved": "https://registry.npmjs.org/@babel/plugin-transform-class-static-block/-/plugin-transform-class-static-block-7.24.4.tgz", - "integrity": "sha512-B8q7Pz870Hz/q9UgP8InNpY01CSLDSCyqX7zcRuv3FcPl87A2G17lASroHWaCtbdIcbYzOZ7kWmXFKbijMSmFg==", + "../tslib/react/node_modules/@babel/plugin-transform-class-static-block": { + "version": "7.24.7", "dev": true, + "license": "MIT", "dependencies": { - "@babel/helper-create-class-features-plugin": "^7.24.4", - "@babel/helper-plugin-utils": "^7.24.0", + "@babel/helper-create-class-features-plugin": "^7.24.7", + "@babel/helper-plugin-utils": "^7.24.7", "@babel/plugin-syntax-class-static-block": "^7.14.5" }, "engines": { @@ -920,19 +950,18 @@ "@babel/core": "^7.12.0" } }, - "node_modules/@babel/plugin-transform-classes": { - "version": "7.24.1", - "resolved": 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"dependencies": { - "@babel/helper-plugin-utils": "^7.24.0" + "@babel/helper-plugin-utils": "^7.24.7" }, "engines": { "node": ">=6.9.0" @@ -1485,13 +1495,12 @@ "@babel/core": "^7.0.0-0" } }, - "node_modules/@babel/plugin-transform-template-literals": { - "version": "7.24.1", - "resolved": "https://registry.npmjs.org/@babel/plugin-transform-template-literals/-/plugin-transform-template-literals-7.24.1.tgz", - "integrity": "sha512-WRkhROsNzriarqECASCNu/nojeXCDTE/F2HmRgOzi7NGvyfYGq1NEjKBK3ckLfRgGc6/lPAqP0vDOSw3YtG34g==", + "../tslib/react/node_modules/@babel/plugin-transform-template-literals": { + "version": "7.24.7", "dev": true, + "license": "MIT", "dependencies": { - "@babel/helper-plugin-utils": "^7.24.0" + "@babel/helper-plugin-utils": "^7.24.7" }, "engines": { "node": ">=6.9.0" @@ -1500,13 +1509,12 @@ "@babel/core": "^7.0.0-0" } }, - "node_modules/@babel/plugin-transform-typeof-symbol": { - "version": "7.24.1", - "resolved": 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{ "node": ">=6.9.0" @@ -1546,14 +1554,13 @@ "@babel/core": "^7.0.0-0" } }, - "node_modules/@babel/plugin-transform-unicode-regex": { - "version": "7.24.1", - "resolved": "https://registry.npmjs.org/@babel/plugin-transform-unicode-regex/-/plugin-transform-unicode-regex-7.24.1.tgz", - "integrity": "sha512-2A/94wgZgxfTsiLaQ2E36XAOdcZmGAaEEgVmxQWwZXWkGhvoHbaqXcKnU8zny4ycpu3vNqg0L/PcCiYtHtA13g==", + "../tslib/react/node_modules/@babel/plugin-transform-unicode-property-regex": { + "version": "7.24.7", "dev": true, + "license": "MIT", "dependencies": { - "@babel/helper-create-regexp-features-plugin": "^7.22.15", - "@babel/helper-plugin-utils": "^7.24.0" + "@babel/helper-create-regexp-features-plugin": "^7.24.7", + "@babel/helper-plugin-utils": "^7.24.7" }, "engines": { "node": ">=6.9.0" @@ -1562,14 +1569,28 @@ "@babel/core": "^7.0.0-0" } }, - "node_modules/@babel/plugin-transform-unicode-sets-regex": { - "version": "7.24.1", - "resolved": 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"node_modules/zustand": { "version": "3.7.2", - "resolved": "https://registry.npmjs.org/zustand/-/zustand-3.7.2.tgz", - "integrity": "sha512-PIJDIZKtokhof+9+60cpockVOq05sJzHCriyvaLBmEJixseQ1a5Kdov6fWZfWOu5SK9c+FhH1jU0tntLxRJYMA==", + "license": "MIT", "engines": { "node": ">=12.7.0" }, @@ -9170,8 +19596,7 @@ }, "node_modules/zwitch": { "version": "2.0.4", - "resolved": "https://registry.npmjs.org/zwitch/-/zwitch-2.0.4.tgz", - "integrity": "sha512-bXE4cR/kVZhKZX/RjPEflHaKVhUVl85noU3v6b8apfQEc1x4A+zBxjZ4lN8LqGd6WZ3dl98pY4o717VFmoPp+A==", + "license": "MIT", "funding": { "type": "github", "url": "https://github.com/sponsors/wooorm" diff --git a/optuna_dashboard/package.json b/optuna_dashboard/package.json index 53f254e8..41cf693b 100644 --- a/optuna_dashboard/package.json +++ b/optuna_dashboard/package.json @@ -16,21 +16,26 @@ "author": "Masashi Shibata", "license": "MIT", "dependencies": { - "@emotion/react": "^11.11.3", - "@emotion/styled": "^11.11.0", - "@mui/icons-material": "^5.15.6", - "@mui/lab": "^5.0.0-alpha.162", - "@mui/material": "^5.15.6", + "@emotion/react": "file:../tslib/react/node_modules/@emotion/react", + "@emotion/styled": "file:../tslib/react/node_modules/@emotion/styled", + "@mui/icons-material": "file:../tslib/react/node_modules/@mui/icons-material", + "@mui/lab": "file:../tslib/react/node_modules/@mui/lab", + "@mui/material": "file:../tslib/react/node_modules/@mui/material", + "@mui/system": "file:../tslib/react/node_modules/@mui/system", + "@optuna/react": "../tslib/react", "@react-three/drei": "^9.96.4", "@react-three/fiber": "^8.15.15", "@tanstack/react-query": "^5.18.1", + "@tanstack/react-table": "^8.16.0", "@tanstack/react-virtual": "^3.1.2", + "@types/papaparse": "^5.3.14", "@types/three": "^0.160.0", "axios": "^1.6.7", "elkjs": "^0.9.1", "notistack": "^3.0.1", + "papaparse": "^5.4.1", "plotly.js-dist-min": "^2.28.0", - "react": "^18.2.0", + "react": "file:../tslib/react/node_modules/react", "react-dom": "^18.2.0", "react-markdown": "^9.0.1", "react-router-dom": "^6.21.3", @@ -50,7 +55,7 @@ "@babel/preset-env": "^7.23.9", "@optuna/types": "../tslib/types/", "@types/plotly.js": "^2.12.32", - "@types/react": "^18.2.48", + "@types/react": "file:../tslib/react/node_modules/@types/react", "@types/react-dom": "^18.2.18", "@types/react-syntax-highlighter": "^15.5.11", "compression-webpack-plugin": "^11.0.0", diff --git a/optuna_dashboard/preferential/samplers/gp.py b/optuna_dashboard/preferential/samplers/gp.py index f56fbdeb..f0aa2c12 100644 --- a/optuna_dashboard/preferential/samplers/gp.py +++ b/optuna_dashboard/preferential/samplers/gp.py @@ -317,7 +317,7 @@ class PreferentialGPSampler(optuna.samplers.BaseSampler): self._rng = np.random.RandomState(seed) self.independent_sampler = independent_sampler or optuna.samplers.RandomSampler( - seed=self._rng.randint(2**32, dtype=np.int64) + seed=self._rng.randint(2**32, dtype=np.int64) # type: ignore ) self._search_space = optuna.search_space.IntersectionSearchSpace() diff --git a/optuna_dashboard/ts/action.ts b/optuna_dashboard/ts/action.ts index 091e7339..f3109f0a 100644 --- a/optuna_dashboard/ts/action.ts +++ b/optuna_dashboard/ts/action.ts @@ -284,9 +284,9 @@ export const actionCreator = () => { }) } - const deleteStudy = (studyId: number) => { + const deleteStudy = (studyId: number, removeAssociatedArtifacts: boolean) => { apiClient - .deleteStudy(studyId) + .deleteStudy(studyId, removeAssociatedArtifacts) .then(() => { setStudySummaries(studySummaries.filter((s) => s.study_id !== studyId)) enqueueSnackbar(`Success to delete a study (id=${studyId})`, { diff --git a/optuna_dashboard/ts/apiClient.ts b/optuna_dashboard/ts/apiClient.ts index 038ea9f7..f1a7ad8c 100644 --- a/optuna_dashboard/ts/apiClient.ts +++ b/optuna_dashboard/ts/apiClient.ts @@ -185,7 +185,10 @@ export abstract class APIClient { studyName: string, directions: Optuna.StudyDirection[] ): Promise - abstract deleteStudy(studyId: number): Promise + abstract deleteStudy( + studyId: number, + removeAssociatedArtifacts: boolean + ): Promise abstract renameStudy( studyId: number, studyName: string diff --git a/optuna_dashboard/ts/axiosClient.ts b/optuna_dashboard/ts/axiosClient.ts index 1c52c42f..bb2b811a 100644 --- a/optuna_dashboard/ts/axiosClient.ts +++ b/optuna_dashboard/ts/axiosClient.ts @@ -116,10 +116,19 @@ export class AxiosClient extends APIClient { : undefined, } }) - deleteStudy = (studyId: number): Promise => - this.axiosInstance.delete(`/api/studies/${studyId}`).then(() => { - return - }) + deleteStudy = ( + studyId: number, + removeAssociatedArtifacts: boolean + ): Promise => + this.axiosInstance + .delete(`/api/studies/${studyId}`, { + data: { + remove_associated_artifacts: removeAssociatedArtifacts, + }, + }) + .then(() => { + return + }) renameStudy = (studyId: number, studyName: string): Promise => this.axiosInstance .post(`/api/studies/${studyId}/rename`, { diff --git a/optuna_dashboard/ts/components/Artifact/DeleteArtifactDialog.tsx b/optuna_dashboard/ts/components/Artifact/DeleteArtifactDialog.tsx index 7b5f90b2..d55dd32a 100644 --- a/optuna_dashboard/ts/components/Artifact/DeleteArtifactDialog.tsx +++ b/optuna_dashboard/ts/components/Artifact/DeleteArtifactDialog.tsx @@ -1,10 +1,12 @@ import { + Alert, Button, Dialog, DialogActions, DialogContent, DialogContentText, DialogTitle, + useTheme, } from "@mui/material" import React, { ReactNode, useState, FC } from "react" import { Artifact } from "ts/types/optuna" @@ -111,6 +113,7 @@ const DeleteDialog: FC<{ filename, handleDeleteArtifact, }) => { + const theme = useTheme() return ( - + Are you sure you want to delete an artifact (" {filename}")? + + If this artifact is linked to another study or trial, it will no + longer be accessible from that study or trial as well. +