Fixed up the namespace in the documentation and finished off all sections other than Game Objects and Physics (yuck).

src/utils/Utils.js

@@ -2,27 +2,25 @@
 * @author       Richard Davey <rich@photonstorm.com>
 * @copyright    2013 Photon Storm Ltd.
 * @license      {@link https://github.com/photonstorm/phaser/blob/master/license.txt|MIT License}
-* @module       Phaser.Utils
 */
 
 /**
-* 
-* @class Utils
+* @class Phaser.Utils
 * @static
 */
 Phaser.Utils = {
 	
 	/**
-	*  Javascript string pad ({@link http://www.webtoolkit.info/})
+	* Javascript string pad http://www.webtoolkit.info/.
 	* pad = the string to pad it out with (defaults to a space)<br>
 	* dir = 1 (left), 2 (right), 3 (both)
-	* @method pad
+	* @method Phaser.Utils.pad
 	* @param {string} str - The target string. 
 	* @param {number} len - Description.
 	* @param {number} pad - the string to pad it out with (defaults to a space).
 	* @param {number} [dir=3] the direction dir = 1 (left), 2 (right), 3 (both).
 	* @return {string}
-	**/
+	*/
 	pad: function (str, len, pad, dir) {
 
 	    if (typeof(len) == "undefined") { var len = 0; }
@@ -54,10 +52,10 @@ Phaser.Utils = {
 	},
 
     /**
-    * This is a slightly modified version of jQuery.isPlainObject.
-    * @method isPlainObject
-    * @param {object} obj - Description.
-    * @return {boolean} - Description.
+    * This is a slightly modified version of jQuery.isPlainObject. A plain object is an object whose internal class property is [object Object].
+    * @method Phaser.Utils.isPlainObject
+    * @param {object} obj - The object to inspect.
+    * @return {boolean} - true if the object is plain, otherwise false.
     */
 	isPlainObject: function (obj) {
 
@@ -96,9 +94,9 @@ Phaser.Utils = {
 	//	objects ... (objects to recurse and copy from)
 
     /**
-    * This is a slightly modified version of {@link http://api.jquery.com/jQuery.extend/|jQuery.extend}
-    * @method extend
-    * @return {Description} Description.
+    * This is a slightly modified version of http://api.jquery.com/jQuery.extend/
+    * @method Phaser.Utils.extend
+    * @return {object} The extended object.
     */
 	extend: function () {
 
@@ -178,7 +176,6 @@ Phaser.Utils = {
  /**
  * Converts a hex color number to an [R, G, B] array
  *
- * @method HEXtoRGB
  * @param {number} hex 
  * @return {array}
  */
@@ -188,8 +185,6 @@ function HEXtoRGB(hex) {
 
  /**
  * A polyfill for Function.prototype.bind
- *
- * @method bind
  */
 if (typeof Function.prototype.bind != 'function') {
   Function.prototype.bind = (function () {