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https://github.com/wassname/pytorch-lightning.git
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Enable any ML experiment tracking framework (#223)
* Implement generic loggers for experiment tracking * Add tests for loggers * Get model tests passing * Test and fix logger pickling * Expand pickle test and fix bug * Missed exp -> logger conversion * Remove commented code * Add docstrings * Update logging docs * Add mlflow to test requirements * Make linter happy * Fix mlflow timestamp * Update Logging.md * Update test_models.py * Update test_models.py * Update test_models.py * Update properties.md * Fix tests * Line length
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committed by
William Falcon
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commit
480eed5cb6
@@ -9,12 +9,20 @@ The current epoch
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Current dtype
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---
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#### experiment
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An instance of test-tube Experiment which you can use to log anything for tensorboard (subclass of [PyTorch SummaryWriter](https://pytorch.org/docs/stable/tensorboard.html)).
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#### logger
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A reference to the logger you passed into trainer.
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```python
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Trainer(logger=your_logger)
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```
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Call it from anywhere in your LightningModule to add metrics, images, etc... whatever your logger supports.
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Here is an example using the Test-tube logger (which is a wrapper on [PyTorch SummaryWriter](https://pytorch.org/docs/stable/tensorboard.html) with versioned folder structure).
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```{.python}
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self.experiment.add_embedding(...)
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self.experiment.log({'val_loss': 0.9})
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self.experiment.add_scalars(...)
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# if logger is a tensorboard logger or test-tube experiment
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self.logger.add_embedding(...)
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self.logger.log({'val_loss': 0.9})
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self.logger.add_scalars(...)
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```
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---
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+87
-55
@@ -1,7 +1,88 @@
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Lighting offers a few options for logging information about model, gpu usage, etc (via test-tube). It also offers printing options for training monitoring.
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Lighting offers options for logging information about model, gpu usage, etc, via several different logging frameworks. It also offers printing options for training monitoring.
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---
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### Setting up logging
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Initialize your logger, which should inherit from `LightningBaseLogger`, and pass
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it to `Trainer`.
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```{.python}
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my_logger = MyLightningLogger(...)
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trainer = Trainer(logger=my_logger)
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```
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Lightning supports several common experiment tracking frameworks out of the box
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---
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#### Test tube
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Log using [test tube](https://williamfalcon.github.io/test-tube/).
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```{.python}
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from pytorch_lightning.logging import TestTubeLogger
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tt_logger = TestTubeLogger(
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save_dir=".",
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name="default",
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debug=False,
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create_git_tag=False
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)
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trainer = Trainer(logger=tt_logger)
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```
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---
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#### MLFlow
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Log using [mlflow](https://mlflow.org)
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```{.python}
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from pytorch_lightning.logging import MLFlowLogger
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mlf_logger = MLFlowLogger(
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experiment_name="default",
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tracking_uri="file:/."
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)
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trainer = Trainer(logger=mlf_logger)
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```
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---
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#### Custom logger
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You can implement your own logger by writing a class that inherits from
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`LightningLoggerBase`. Use the `rank_zero_only` decorator to make sure that
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only the first process in DDP training logs data.
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```{.python}
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from pytorch_lightning.logging import LightningLoggerBase, rank_zero_only
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class MyLogger(LightningLoggerBase):
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@rank_zero_only
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def log_hyperparams(self, params):
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# params is an argparse.Namespace
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# your code to record hyperparameters goes here
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pass
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@rank_zero_only
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def log_metrics(self, metrics, step_num):
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# metrics is a dictionary of metric names and values
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# your code to record metrics goes here
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pass
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def save(self):
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# Optional. Any code necessary to save logger data goes here
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pass
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@rank_zero_only
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def finalize(self, status):
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# Optional. Any code that needs to be run after training
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# finishes goes here
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```
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If you write a logger than may be useful to others, please send
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a pull request to add it to Lighting!
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---
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### Using loggers
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#### Display metrics in progress bar
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``` {.python}
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# DEFAULT
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@@ -17,7 +98,7 @@ trainer = Trainer(row_log_interval=10)
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```
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---
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#### Log metric row every k batches
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#### Log GPU memory
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Logs GPU memory when metrics are logged.
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``` {.python}
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# DEFAULT
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@@ -38,61 +119,12 @@ trainer = Trainer(process_position=1)
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---
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#### Save a snapshot of all hyperparameters
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Whenever you call .save() on the test-tube experiment it logs all the hyperparameters in current use.
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Give lightning a test-tube Experiment object to automate this for you.
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Log hyperparameters using the logger
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``` {.python}
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from test_tube import Experiment
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logger = TestTubeLogger(...)
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logger.log_hyperparams(args)
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exp = Experiment(...)
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Trainer(experiment=exp)
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```
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---
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#### Snapshot code for a training run
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Whenever you call .save() on the test-tube experiment it snapshows all code and pushes to a git tag.
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Give lightning a test-tube Experiment object to automate this for you.
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``` {.python}
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from test_tube import Experiment
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exp = Experiment(create_git_tag=True)
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Trainer(experiment=exp)
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```
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---
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### Tensorboard support
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In the LightningModule you can access the experiment logger by doing:
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```python
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self.experiment
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# add image
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# Look at PyTorch SummaryWriter docs for what you can do.
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self.experiment.add_image(...)
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```
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The experiment object is a strict subclass of PyTorch SummaryWriter. However, this class
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also snapshots every detail about the experiment (data folder paths, code, hyperparams),
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and allows you to visualize it using tensorboard.
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``` {.python}
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from test_tube import Experiment, HyperOptArgumentParser
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# exp hyperparams
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args = HyperOptArgumentParser()
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hparams = args.parse_args()
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# this is a summaryWriter with nicer logging structure
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exp = Experiment(save_dir='/some/path', create_git_tag=True)
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# track experiment details (must be ArgumentParser or HyperOptArgumentParser).
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# each option in the parser is tracked
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exp.argparse(hparams)
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exp.tag({'description': 'running demo'})
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# trainer uses the exp object to log exp data
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trainer = Trainer(experiment=exp)
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trainer.fit(model)
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# view logs at:
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# tensorboard --logdir /some/path
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Trainer(logger=logger)
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```
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---
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