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332 Commits
Author SHA1 Message Date
William Falcon 2357815640 release v0.3 2019-07-21 08:08:21 -04:00
William Falcon ab87244884 release v0.2.6 2019-07-20 09:39:00 -04:00
William Falcon 2aa0b3be5c removed logging 2019-07-20 09:31:10 -04:00
William Falcon 0fdf290201 removed logging 2019-07-20 09:22:47 -04:00
William Falcon 1a39f703ad removed logging 2019-07-20 09:22:04 -04:00
William Falcon 955e9ea6d5 removed logging 2019-07-20 09:18:45 -04:00
William Falcon 10e031a843 removed logging 2019-07-20 09:17:20 -04:00
William Falcon 229d168c20 removed logging 2019-07-20 09:15:09 -04:00
William Falcon 468bd141f4 added slurm managed flag catch for non-slurm peeps 2019-07-20 09:08:24 -04:00
William Falcon 00678c6053 added slurm managed flag catch for non-slurm peeps 2019-07-20 08:53:36 -04:00
William Falcon bbb5001aac added slurm managed flag catch for non-slurm peeps 2019-07-20 08:53:24 -04:00
William Falcon a514674358 added slurm managed flag catch for non-slurm peeps 2019-07-20 08:38:17 -04:00
William Falcon 9757841e67 release v0.2.5.2 2019-07-18 17:59:39 -04:00
William Falcon 0ac7a8590b added slurm managed flag catch for non-slurm peeps 2019-07-18 17:59:16 -04:00
William Falcon 6e12431e6b added slurm managed flag catch for non-slurm peeps 2019-07-18 17:58:38 -04:00
William Falcon c2e2298586 release v0.2.5.1 2019-07-18 17:14:34 -04:00
William Falcon 319feb7da5 removed printing. added auto process gen if slurm tasks do not match 2019-07-18 17:13:57 -04:00
William Falcon 5195124d4e added slurm no process warning 2019-07-18 17:06:56 -04:00
William Falcon 4e67983f23 added slurm no process warning 2019-07-18 17:05:09 -04:00
William Falcon c02b6c4c88 added slurm no process warning 2019-07-18 17:03:27 -04:00
William Falcon ad44d9168b added slurm no process warning 2019-07-18 16:47:46 -04:00
William Falcon 53a1a6d462 removed print lines 2019-07-18 16:37:48 -04:00
William Falcon 59d60eaf18 testing single process ddp 2019-07-18 15:06:20 -04:00
William Falcon 112be99b19 testing single process ddp 2019-07-18 14:57:56 -04:00
William Falcon 0e67773d2e testing single process ddp 2019-07-18 14:53:01 -04:00
William Falcon 394cdeeb8b added epoch flag back 2019-07-18 13:32:36 -04:00
William Falcon d0a8292e02 release v0.2.5 2019-07-18 12:13:00 -04:00
William Falcon d7409afed9 added arg docs 2019-07-18 12:11:59 -04:00
William Falcon f01cb63234 added arg docs 2019-07-18 12:10:07 -04:00
William Falcon 8be7480f31 added arg docs 2019-07-18 12:09:25 -04:00
William Falcon 751bc7c695 added arg docs 2019-07-18 12:08:47 -04:00
William Falcon 3be26dbb95 added arg docs 2019-07-18 12:08:17 -04:00
William Falcon 2ca0864ce8 added arg docs 2019-07-18 12:07:11 -04:00
William Falcon b1041220ac added arg docs 2019-07-18 12:05:52 -04:00
William Falcon da842c0cd6 added arg docs 2019-07-18 12:04:45 -04:00
William Falcon c4971e8432 added arg docs 2019-07-18 12:04:19 -04:00
William Falcon e81dbce38c set dp as default backend 2019-07-18 11:59:14 -04:00
William Falcon 0d992689d5 set dp as default backend 2019-07-18 11:58:27 -04:00
William Falcon 4085b3fa69 set dp as default backend 2019-07-18 11:57:39 -04:00
William Falcon b684bb55c5 set dp as default backend 2019-07-18 11:56:48 -04:00
William Falcon f98f88ff08 set dp as default backend 2019-07-18 11:51:43 -04:00
William Falcon f0955df4f0 set dp as default backend 2019-07-18 11:50:23 -04:00
William Falcon 7744c7117d set dp as default backend 2019-07-18 11:49:42 -04:00
William Falcon 22f4d6e26e set dp as default backend 2019-07-18 11:49:28 -04:00
William Falcon d49a83dec0 set dp as default backend 2019-07-18 11:48:16 -04:00
William Falcon 6d1d5ef68e set dp as default backend 2019-07-18 11:45:55 -04:00
William Falcon 3a1525222d set dp as default backend 2019-07-18 11:42:47 -04:00
William Falcon f650253cae set dp as default backend 2019-07-18 11:40:10 -04:00
William Falcon c67c84b443 set dp as default backend 2019-07-18 11:40:00 -04:00
William Falcon 4db32984c6 set dp as default backend 2019-07-18 11:39:13 -04:00
William Falcon 81d39786d9 set dp as default backend 2019-07-18 11:39:06 -04:00
William Falcon 63de076765 set dp as default backend 2019-07-18 11:36:48 -04:00
William Falcon 256ca62a3c set dp as default backend 2019-07-18 11:36:31 -04:00
William Falcon 39d04eb795 set dp as default backend 2019-07-18 11:35:59 -04:00
William Falcon e02857fcce set dp as default backend 2019-07-18 11:33:51 -04:00
William Falcon c163caf8cb set dp as default backend 2019-07-18 11:31:45 -04:00
William Falcon 2096a0aa84 set dp as default backend 2019-07-18 11:29:38 -04:00
William Falcon c253f96c53 set dp as default backend 2019-07-18 11:29:21 -04:00
William Falcon 551daca047 set dp as default backend 2019-07-18 11:25:02 -04:00
William Falcon ded0abead7 set dp as default backend 2019-07-18 11:21:35 -04:00
William Falcon e86b191691 set dp as default backend 2019-07-18 11:20:11 -04:00
William Falcon 3321e8c541 set dp as default backend 2019-07-18 11:18:19 -04:00
William Falcon bc3a805202 set dp as default backend 2019-07-18 11:16:16 -04:00
William Falcon 162b9f4f27 set dp as default backend 2019-07-18 11:15:21 -04:00
William Falcon e5bc3ea5b4 added training router 2019-07-18 11:09:37 -04:00
William Falcon baa139f97a added training router 2019-07-18 11:09:00 -04:00
William Falcon 470f3e6d29 added training router 2019-07-18 11:08:48 -04:00
William Falcon c12a0b57da added dp and ddp flag 2019-07-18 11:03:16 -04:00
William Falcon e7ecfa15f8 added option and flag 2019-07-18 10:56:45 -04:00
William Falcon 9051eb0039 updated docs 2019-07-17 15:56:55 -04:00
William Falcon bb8dbfca09 release v0.2.4.1 2019-07-17 10:04:14 -04:00
William Falcon 0240c70780 updated required deps 2019-07-17 10:03:58 -04:00
William Falcon a41abad5b2 Update trainer.py 2019-07-16 17:02:21 -04:00
William Falcon a83588b14e Update trainer.py 2019-07-16 13:12:56 -04:00
William Falcon 80192752b7 Merge pull request #13 from cinjon/on_tng_metrics
add a hook for on_tng_metrics so that users get access to the grad_no…
2019-07-16 12:59:16 -04:00
Cinjon Resnick fbd3873a0f add a hook for on_tng_metrics so that users get access to the grad_norm and mem_map dicts. 2019-07-16 12:51:48 -04:00
William Falcon 28cfddbe65 accept dist sampler classes 2019-07-16 12:44:58 -04:00
William Falcon b4bdb283ce release v0.2.4 2019-07-16 10:05:14 -04:00
William Falcon 967e57f071 early stop starts counting once min epochs met 2019-07-16 10:00:03 -04:00
William Falcon d12f6b7dd8 added summary flag 2019-07-15 21:11:29 -04:00
William Falcon 182c025c88 removed validation call 2019-07-15 20:48:46 -04:00
William Falcon 58e6199ce8 removed validation call 2019-07-15 14:56:56 -04:00
William Falcon 6a33f0d483 made early stop checkpoint optional 2019-07-15 14:54:38 -04:00
William Falcon dd230a93e8 made early stop checkpoint optional 2019-07-15 14:53:37 -04:00
William Falcon 3aa9cfc18e made checkpoint callback optional 2019-07-15 13:18:56 -04:00
William Falcon e57f461323 made checkpoint callback optional 2019-07-15 13:17:38 -04:00
William Falcon ab00514ef6 fixed metrics request not forced anymore 2019-07-15 13:03:08 -04:00
William Falcon 1dd58b4687 Merge branch 'master' of https://github.com/williamFalcon/pytorch-lightning 2019-07-15 13:01:17 -04:00
William Falcon b4b8a3dfde fixed none bug 2019-07-15 13:01:08 -04:00
William Falcon d8782c7b90 Update README.md 2019-07-15 09:21:30 -04:00
William Falcon d5878e9a72 release v0.2.3 2019-07-14 18:15:15 -04:00
William Falcon ad24bef1c9 removed print statements 2019-07-14 18:12:41 -04:00
William Falcon 50246a5066 working on single gpu init speed 2019-07-14 17:33:48 -04:00
William Falcon 21914cb1c1 working on single gpu init speed 2019-07-14 17:15:20 -04:00
William Falcon 904935cf98 working on single gpu init speed 2019-07-14 17:11:52 -04:00
William Falcon 468e75c180 working on single gpu init speed 2019-07-14 17:10:13 -04:00
William Falcon 849f52b7a6 modified single gpu init 2019-07-14 17:01:18 -04:00
William Falcon e520297781 modified single gpu init 2019-07-14 16:57:15 -04:00
William Falcon cefc27112d ddp flag change 2019-07-13 22:28:08 -04:00
William Falcon 6876f60098 merge 2019-07-13 22:21:17 -04:00
William Falcon fc1653e337 Merge branch 'nccl' of https://github.com/williamFalcon/pytorch-lightning into nccl 2019-07-13 22:19:41 -04:00
William Falcon e9f5913dac enabling gpu size = 1 to run without data parallel 2019-07-13 22:16:10 -04:00
William Falcon 7da82c2560 added fallback local init 2019-07-13 22:16:10 -04:00
William Falcon a2639c6894 added fallback local init 2019-07-13 22:16:10 -04:00
William Falcon eb05fa316f added fallback local init 2019-07-13 22:16:10 -04:00
William Falcon 6d55adb0d8 fixed nccl init 2019-07-13 22:16:10 -04:00
William Falcon cff0500a63 fixed nccl init 2019-07-13 22:16:10 -04:00
William Falcon f3ca184fb6 fixed nccl init 2019-07-13 22:16:10 -04:00
William Falcon 3239c9fdf8 fixed nccl init 2019-07-13 22:16:10 -04:00
William Falcon 7e37f68a5b fixed nccl init 2019-07-13 22:16:10 -04:00
William Falcon 960937ebe9 fixed nccl init 2019-07-13 22:16:10 -04:00
William Falcon a87784b4c5 fixed nccl init 2019-07-13 22:16:10 -04:00
William Falcon 5812efcf24 fixed nccl init 2019-07-13 22:16:10 -04:00
William Falcon e82014ec6c fixed nccl init 2019-07-13 22:16:10 -04:00
William Falcon dc87a4fc91 fixed nccl init 2019-07-13 22:16:10 -04:00
William Falcon 4f5eef2e78 fixed nccl init 2019-07-13 22:16:10 -04:00
William Falcon 6c02afefca fixed nccl init 2019-07-13 22:16:10 -04:00
William Falcon 4696e12641 fixed nccl init 2019-07-13 22:16:10 -04:00
William Falcon 7c688fbf2e enabling gpu size = 1 to run without data parallel 2019-07-13 22:09:17 -04:00
William Falcon 9ccfc7bd33 added fallback local init 2019-07-13 22:03:36 -04:00
William Falcon 52a98d76d8 added fallback local init 2019-07-13 10:16:50 -04:00
William Falcon 8b0cda84e7 added fallback local init 2019-07-13 10:13:52 -04:00
William Falcon 9f41a9e8b7 fixed nccl init 2019-07-12 16:35:20 -04:00
William Falcon b7baa96186 fixed nccl init 2019-07-12 16:29:44 -04:00
William Falcon faa2d4fa8b fixed nccl init 2019-07-12 16:23:20 -04:00
William Falcon 4f5da45fae fixed nccl init 2019-07-12 16:17:50 -04:00
William Falcon 7e54ad3f7c fixed nccl init 2019-07-12 16:16:46 -04:00
William Falcon 3bf366bcd8 fixed nccl init 2019-07-12 16:08:23 -04:00
William Falcon 6219f24a03 fixed nccl init 2019-07-12 16:07:57 -04:00
William Falcon 0bd81db538 fixed nccl init 2019-07-12 16:05:46 -04:00
William Falcon c84700814d fixed nccl init 2019-07-12 16:03:17 -04:00
William Falcon c244599ae8 fixed nccl init 2019-07-12 15:59:33 -04:00
William Falcon d99b121379 fixed nccl init 2019-07-12 15:59:12 -04:00
William Falcon 91b869d043 fixed nccl init 2019-07-12 15:55:28 -04:00
William Falcon 08e1ab64b5 fixed nccl init 2019-07-12 15:53:45 -04:00
William Falcon c1b21fb1e4 Merge pull request #11 from cinjon/modulefix
trainer: module fix.
2019-07-12 15:28:48 -04:00
William Falcon 8451bb7745 fixed nccl init 2019-07-12 15:25:34 -04:00
William Falcon 1a1771cfd8 fixed nccl init 2019-07-12 15:24:42 -04:00
William Falcon 1952e9be49 fixed nccl init 2019-07-12 15:11:32 -04:00
William Falcon 19391b1df1 fixed nccl init 2019-07-12 15:04:20 -04:00
William Falcon 369174c4d3 fixed nccl init 2019-07-12 14:36:00 -04:00
William Falcon 5ba0a2ed48 fixed nccl init 2019-07-12 14:28:49 -04:00
William Falcon 88061b2284 Merge branch 'master' of https://github.com/williamFalcon/pytorch-lightning 2019-07-12 13:42:53 -04:00
William Falcon ba38037917 fixed nccl init 2019-07-12 13:39:58 -04:00
William Falcon a7bb731a1d testing env init 2019-07-12 13:19:10 -04:00
William Falcon 58531888e0 testing env init 2019-07-12 13:17:33 -04:00
William Falcon 56ac885f03 Merge pull request #12 from cinjon/commafix
root_module: fix comma splits.
2019-07-12 13:13:57 -04:00
William Falcon 5e033fd97a testing env init 2019-07-12 13:11:08 -04:00
William Falcon 5d14b97aa6 testing file init 2019-07-12 12:57:54 -04:00
William Falcon 0b0addbcbe testing file init 2019-07-12 12:56:44 -04:00
Cinjon Resnick 098d518398 trainer: module fix. 2019-07-12 12:54:35 -04:00
William Falcon ba111e681e testing file init 2019-07-12 12:41:54 -04:00
Cinjon Resnick 3de053c903 root_module: fix comma splits. 2019-07-12 12:38:39 -04:00
William Falcon ac1bd57b8b testing file init 2019-07-12 12:33:54 -04:00
William Falcon 3f0fab9160 reset master 2019-07-12 12:32:36 -04:00
William Falcon 24c13aadc0 testing file init 2019-07-12 12:06:19 -04:00
William Falcon 885bad3555 testing master_Addr flag 2019-07-12 11:55:14 -04:00
William Falcon 6dde1d7ae3 testing master_Addr flag 2019-07-12 11:43:05 -04:00
William Falcon c223960edb testing master_Addr flag 2019-07-12 11:30:57 -04:00
William Falcon 32646cf2ee release v0.2.2 2019-07-11 16:19:11 -04:00
William Falcon 415ee4903b simplify trainer output 2019-07-11 15:23:33 -04:00
William Falcon a21dc5a187 simplify trainer output 2019-07-11 15:15:22 -04:00
William Falcon 0929908229 simplify trainer output 2019-07-11 15:08:45 -04:00
William Falcon cc12a1c8fa added clarifying comments 2019-07-11 14:58:47 -04:00
William Falcon 91b3a0aac6 added clarifying comments 2019-07-11 14:57:26 -04:00
William Falcon ed35f4e076 updated amp use 2019-07-11 14:35:41 -04:00
William Falcon c4781cb415 Merge branch 'master' of https://github.com/williamFalcon/pytorch-lightning 2019-07-11 14:18:07 -04:00
William Falcon 730a06640b updated amp use 2019-07-11 14:17:43 -04:00
William Falcon 6eb25edb31 release v0.21 2019-07-09 19:56:11 -04:00
William Falcon da24d87ece release v0.2 2019-07-08 20:19:11 -04:00
William Falcon cc3905cdc5 removed from_lightning flag 2019-07-08 20:17:55 -04:00
William Falcon 611fbdea3e removed from_lightning flag 2019-07-08 20:14:56 -04:00
William Falcon f38f3827fd docs 2019-07-08 20:13:40 -04:00
William Falcon 12ee3c60dd docs 2019-07-08 20:12:27 -04:00
William Falcon 65f6cd4321 removed dead code 2019-07-08 20:11:43 -04:00
William Falcon 7ab1a837a9 adjusted imports 2019-07-08 20:11:20 -04:00
William Falcon 7123dfeaf5 scaled batch size 2019-07-08 20:06:45 -04:00
William Falcon 9ee8f93483 scaled batch size 2019-07-08 20:05:45 -04:00
William Falcon 4f3c9d019b scaled batch size 2019-07-08 20:04:44 -04:00
William Falcon 9bb7a30f39 scaled batch size 2019-07-08 20:03:31 -04:00
William Falcon a8f3b1b21f scaled batch size 2019-07-08 20:03:08 -04:00
William Falcon 51c55c938a scaled batch size 2019-07-08 20:02:06 -04:00
William Falcon 49ad7d6c28 scaled batch size 2019-07-08 20:00:43 -04:00
William Falcon 7285598e11 scaled batch size 2019-07-08 19:57:51 -04:00
William Falcon 9d35b5b4f7 scaled batch size 2019-07-08 19:57:06 -04:00
William Falcon 2b16c75499 scaled batch size 2019-07-08 19:56:52 -04:00
William Falcon 0bd9152e0a scaled batch size 2019-07-08 19:55:26 -04:00
William Falcon a87073bffd scaled batch size 2019-07-08 19:54:00 -04:00
William Falcon f95fad864d scaled batch size 2019-07-08 19:53:24 -04:00
William Falcon b644234d08 scaled batch size 2019-07-08 19:49:37 -04:00
William Falcon f2c1f0221e scaled batch size 2019-07-08 19:48:22 -04:00
William Falcon 25dbd7a936 scaled batch size 2019-07-08 19:45:52 -04:00
William Falcon 971a6c4184 scaled batch size 2019-07-08 19:44:23 -04:00
William Falcon f95cc6144c scaled batch size 2019-07-08 19:42:53 -04:00
William Falcon 3e2dde1680 added dist sampler exception 2019-07-08 19:39:59 -04:00
William Falcon 96314cbf46 updated dist sampler 2019-07-08 19:26:51 -04:00
William Falcon d596ff2039 moved sampler 2019-07-08 19:15:28 -04:00
William Falcon cc3fbff704 moved sampler 2019-07-08 19:11:53 -04:00
William Falcon 0bcc858cef moved sampler 2019-07-08 19:11:16 -04:00
William Falcon cf4b25e455 moved sampler 2019-07-08 18:59:16 -04:00
William Falcon 31d9062b3a moved sampler 2019-07-08 18:55:05 -04:00
William Falcon 3873850ad4 moved sampler 2019-07-08 18:33:29 -04:00
William Falcon 85dd78f3a4 moved sampler 2019-07-08 18:32:28 -04:00
William Falcon 493a98d591 moved sampler 2019-07-08 18:28:30 -04:00
William Falcon bd2d1ddc07 moved sampler 2019-07-08 18:02:41 -04:00
William Falcon 14d1329655 auto distribute datasets across nodes 2019-07-08 17:51:07 -04:00
William Falcon c494e6d305 added cpu example 2019-07-08 17:45:09 -04:00
William Falcon a311a62b48 added cpu example 2019-07-08 17:44:06 -04:00
William Falcon 7a354668ff added cpu example 2019-07-08 17:42:33 -04:00
William Falcon abd8b2ea4e moved dataloaders after amp and optimizers 2019-07-08 17:41:07 -04:00
William Falcon 726dd1f61a moved dataloaders after amp and optimizers 2019-07-08 17:40:23 -04:00
William Falcon 687a133145 amp now supports multiple optimizers 2019-07-08 17:38:57 -04:00
William Falcon 98b779ba42 added single node example 2019-07-08 17:33:20 -04:00
William Falcon c750015c80 added single node example 2019-07-08 17:31:47 -04:00
William Falcon bd43c4417f added single node example 2019-07-08 17:29:46 -04:00
William Falcon e32d355d26 testing new pretrain order 2019-07-08 17:15:26 -04:00
William Falcon 64bdd1c46d cleaning up demo file 2019-07-08 14:31:40 -04:00
William Falcon 5c56295421 updated demo name 2019-07-08 14:29:03 -04:00
William Falcon bba51dde8c updated parser help 2019-07-08 14:27:19 -04:00
William Falcon 7c0e3715dd using slurm flag to fine node nb 2019-07-08 14:22:09 -04:00
William Falcon d2a717d31e using slurm flag to fine node nb 2019-07-08 14:14:36 -04:00
William Falcon 553223334f using slurm flag to fine node nb 2019-07-08 14:11:48 -04:00
William Falcon 8552a911bf using slurm flag to fine node nb 2019-07-08 14:07:04 -04:00
William Falcon 94da5431cd using slurm flag to fine node nb 2019-07-08 14:01:59 -04:00
William Falcon 63c113d55b using slurm flag to fine node nb 2019-07-08 14:00:17 -04:00
William Falcon 2261eaac2e using slurm flag to fine node nb 2019-07-08 13:56:20 -04:00
William Falcon fac98e0846 using slurm flag to fine node nb 2019-07-08 13:51:04 -04:00
William Falcon 52a3c3137a using slurm flag to fine node nb 2019-07-08 13:48:59 -04:00
William Falcon e637e09788 added multi-node locked ip search 2019-07-08 13:41:02 -04:00
William Falcon 5c41838d55 added multi-node locked ip search 2019-07-08 13:37:21 -04:00
William Falcon 8faf15073d added multi-node locked ip search 2019-07-08 13:27:04 -04:00
William Falcon 4589f49820 added multi-node locked ip search 2019-07-08 13:26:00 -04:00
William Falcon bc63bfe34b added multi-node locked ip search 2019-07-08 13:25:02 -04:00
William Falcon e2c36e8714 added multi-node locked ip search 2019-07-08 13:17:15 -04:00
William Falcon 660b966a8f added multi-node locked ip search 2019-07-08 13:04:52 -04:00
William Falcon ae0b85f235 added multi-node locked ip search 2019-07-08 13:01:38 -04:00
William Falcon a83d00456b added multi-node locked ip search 2019-07-08 12:59:10 -04:00
William Falcon c0e3cb784a added multi-node locked ip search 2019-07-08 12:58:47 -04:00
William Falcon 615711131e added multi-node locked ip search 2019-07-08 12:54:20 -04:00
William Falcon c2987d3b40 added multi-node locked ip search 2019-07-08 12:51:07 -04:00
William Falcon f4ab46e1c9 added multi-node locked ip search 2019-07-08 12:45:20 -04:00
William Falcon 6462cab351 added multi-node locked ip search 2019-07-08 12:39:49 -04:00
William Falcon 1d8d1f72a9 added multi-node locked ip search 2019-07-08 12:34:33 -04:00
William Falcon 6a1199b797 added multi-node locked ip search 2019-07-08 12:32:48 -04:00
William Falcon 212eabf626 added multi-node locked ip search 2019-07-08 12:30:38 -04:00
William Falcon fd194ab843 added multi-node locked ip search 2019-07-08 12:27:53 -04:00
William Falcon b563cfe598 testing slurm ddp 2019-07-08 11:48:28 -04:00
William Falcon 5f697cb22e testing slurm ddp 2019-07-08 11:44:11 -04:00
William Falcon dbfcbbc004 testing slurm ddp 2019-07-08 11:36:45 -04:00
William Falcon 770aff5fc7 testing slurm ddp 2019-07-08 11:32:01 -04:00
William Falcon 1f3d011c58 testing slurm ddp 2019-07-08 11:24:17 -04:00
William Falcon a971ca515d testing slurm ddp 2019-07-08 11:21:41 -04:00
William Falcon 3c2b3ccc5d testing slurm ddp 2019-07-08 11:21:28 -04:00
William Falcon f11eda857d testing slurm ddp 2019-07-08 10:59:07 -04:00
William Falcon e325ba5f68 testing slurm ddp 2019-07-08 10:57:34 -04:00
William Falcon f907158c97 testing slurm ddp 2019-07-08 10:55:06 -04:00
William Falcon 06928f721f testing slurm ddp 2019-07-08 10:51:31 -04:00
William Falcon 01b9502847 testing slurm ddp 2019-07-08 10:45:35 -04:00
William Falcon ae0349d449 testing slurm ddp 2019-07-08 10:30:55 -04:00
William Falcon 861047672a testing slurm ddp 2019-07-08 10:24:29 -04:00
William Falcon 65a0c98c5b testing slurm ddp 2019-07-08 10:23:04 -04:00
William Falcon 0fc9550a24 testing slurm ddp 2019-07-08 10:18:57 -04:00
William Falcon 6029d8fb75 testing slurm ddp 2019-07-08 10:16:12 -04:00
William Falcon cdbbf9abe3 moved cuda flags inside trainer 2019-07-08 10:00:04 -04:00
William Falcon 79ca5f6265 moved cuda flags inside trainer 2019-07-08 09:58:43 -04:00
William Falcon 2172280d8d moved cuda flags inside trainer 2019-07-08 09:58:11 -04:00
William Falcon f5a87c5016 moved cuda flags inside trainer 2019-07-08 09:58:01 -04:00
William Falcon 523cc9f2be added multi-node proc 0 ip reading 2019-07-08 09:50:45 -04:00
William Falcon ef530af7b8 added multi-node proc 0 ip reading 2019-07-08 09:45:43 -04:00
William Falcon 77fb4441ab added multi-node proc 0 ip reading 2019-07-08 09:45:00 -04:00
William Falcon e1823e0d1a added multi-node proc 0 ip reading 2019-07-08 09:44:20 -04:00
William Falcon 3422f7610b added multi-node proc 0 ip reading 2019-07-08 09:42:13 -04:00
William Falcon 79d9adf004 added multi-node proc 0 ip reading 2019-07-08 09:36:27 -04:00
William Falcon f705f15c7a added multi-node proc 0 ip reading 2019-07-08 09:36:09 -04:00
William Falcon 5fbe00837e easy import for lightningModule 2019-07-08 09:33:58 -04:00
William Falcon 1e57a75ff9 easy import for lightningModule 2019-07-08 09:32:57 -04:00
William Falcon 7d08e52b5d easy import for lightningModule 2019-07-08 09:30:51 -04:00
William Falcon d540d476a0 easy import for lightningModule 2019-07-08 09:29:02 -04:00
William Falcon 4454b968f0 easy import for lightningModule 2019-07-08 09:27:16 -04:00
William Falcon ae81473464 easy import for lightningModule 2019-07-03 18:43:13 -04:00
William Falcon 153b95c01f checkpoint only on rank=0 now 2019-07-03 18:18:29 -04:00
William Falcon a9acae3ed0 checkpoint only on rank=0 now 2019-07-03 18:17:12 -04:00
William Falcon f101152650 checkpoint only on rank=0 now 2019-07-03 18:14:34 -04:00
William Falcon 75e32daad4 clean up dead code 2019-07-03 17:09:39 -04:00
William Falcon 522af58504 clean up dead code 2019-07-03 17:05:20 -04:00
William Falcon 3ed02e4ed6 clean up dead code 2019-07-03 17:03:10 -04:00
William Falcon 9ef70bffa9 clean up dead code 2019-07-03 17:02:30 -04:00
William Falcon 9340e0a091 clean up dead code 2019-07-03 16:51:32 -04:00
William Falcon 0bfe0a993a clean up dead code 2019-07-03 16:49:53 -04:00
William Falcon 4b31f3d4bf clean up dead code 2019-07-03 16:47:39 -04:00
William Falcon 5bdad8a7b8 clean up dead code 2019-07-03 16:46:14 -04:00
William Falcon cd0d294236 clean up dead code 2019-07-03 16:44:18 -04:00
William Falcon e8abbb1e75 clean up dead code 2019-07-03 16:43:05 -04:00
William Falcon c10121c6ff clean up dead code 2019-07-03 16:39:33 -04:00
William Falcon 8630df5880 clean up dead code 2019-07-03 16:39:25 -04:00
William Falcon 23137ea08a added single node distdataparallel 2019-07-03 16:38:03 -04:00
William Falcon 32eddf492e added single node distdataparallel 2019-07-03 16:34:49 -04:00
William Falcon 7010d16752 added single node distdataparallel 2019-07-03 16:31:43 -04:00
William Falcon 080c308bcc added single node distdataparallel 2019-07-03 16:29:10 -04:00
William Falcon 8ddee926dd added single node distdataparallel 2019-07-03 16:24:10 -04:00
William Falcon 7e874dfb43 added single node distdataparallel 2019-07-03 16:23:12 -04:00
William Falcon 55b69f9fc5 added single node distdataparallel 2019-07-03 16:22:43 -04:00
William Falcon 8d3090c843 added single node distdataparallel 2019-07-03 16:21:56 -04:00
William Falcon 62774ffacb added single node distdataparallel 2019-07-03 16:17:56 -04:00
William Falcon 98a0a23158 added single node distdataparallel 2019-07-03 15:31:37 -04:00
William Falcon d52c92e09d added single node distdataparallel 2019-07-03 15:26:19 -04:00
William Falcon 09ed6904c2 added single node distdataparallel 2019-07-03 15:25:56 -04:00
William Falcon 970d1609e1 added single node distdataparallel 2019-07-03 15:25:33 -04:00
William Falcon 5f57792131 added single node distdataparallel 2019-07-03 15:24:56 -04:00
William Falcon 6eb7674e18 added single node distdataparallel 2019-07-03 15:24:16 -04:00
William Falcon 5ff3a90a6f added single node distdataparallel 2019-07-03 15:23:47 -04:00
William Falcon 22becf3915 added single node distdataparallel 2019-07-03 15:23:39 -04:00
William Falcon 5797f812ad added single node distdataparallel 2019-07-03 15:22:57 -04:00
William Falcon 251c2e964f added single node distdataparallel 2019-07-03 15:22:31 -04:00
William Falcon d67e80bf16 added single node distdataparallel 2019-07-03 15:21:13 -04:00
William Falcon 98db51eb95 added single node distdataparallel 2019-07-03 15:20:33 -04:00
William Falcon 129dce0d18 added single node distdataparallel 2019-07-03 15:18:47 -04:00
William Falcon 7f3c653747 added single node distdataparallel 2019-07-03 15:18:16 -04:00
William Falcon f06c650fc1 added single node distdataparallel 2019-07-03 15:18:10 -04:00
William Falcon b9f581ab87 added single node distdataparallel 2019-07-03 15:17:02 -04:00
William Falcon ac57dac235 added single node distdataparallel 2019-07-03 15:16:09 -04:00
William Falcon 96ab78dc41 added single node distdataparallel 2019-07-03 15:11:35 -04:00
William Falcon 7ef6db49d3 added single node distdataparallel 2019-07-03 15:11:17 -04:00
William Falcon c4aca832ba added single node distdataparallel 2019-07-03 15:09:49 -04:00
William Falcon 30e2fc6c4b added on_hpc_load and on_hpc_save hooks 2019-07-02 09:36:48 -04:00
William Falcon 62e091f48d added on_hpc_load and on_hpc_save hooks 2019-07-02 09:36:33 -04:00
William Falcon f257c080c0 added on_hpc_load and on_hpc_save hooks 2019-07-02 09:35:15 -04:00
William Falcon cd11b7de98 remove default tensor 2019-07-02 09:23:47 -04:00
William Falcon 2eba85d02c release v0.122 2019-07-02 08:59:11 -04:00
William Falcon 49c27770da fix dataparallel 2019-07-01 18:38:07 -04:00
William Falcon 0f5a7c322e fix dataparallel 2019-07-01 18:33:24 -04:00
William Falcon 8fde5e444e release v0.121 2019-06-30 18:56:54 -04:00
20 changed files with 1276 additions and 322 deletions
+2 -2
View File
@@ -116,8 +116,8 @@ def validation_end(self, outputs):
return tqdm_dic return tqdm_dic
``` ```
## TensorboardX ## Tensorboard
Lightning is fully integrated with tensorboardX. Lightning is fully integrated with tensorboard.
<p align="center"> <p align="center">
<a href="https://williamfalcon.github.io/pytorch-lightning/"> <a href="https://williamfalcon.github.io/pytorch-lightning/">
+1 -1
View File
@@ -19,7 +19,7 @@ Cut the learning rate by 10 at every epoch listed in this list.
trainer = Trainer(lr_scheduler_milestones=None) trainer = Trainer(lr_scheduler_milestones=None)
# cut LR by 10 at 100, 200, and 300 epochs # cut LR by 10 at 100, 200, and 300 epochs
trainer = Trainer(lr_scheduler_milestones=[100, 200, 300]) trainer = Trainer(lr_scheduler_milestones='100, 200, 300')
``` ```
--- ---
@@ -7,6 +7,8 @@ import torch
import torch.nn.functional as F import torch.nn.functional as F
from test_tube import HyperOptArgumentParser from test_tube import HyperOptArgumentParser
from torch import optim from torch import optim
from torch.utils.data import DataLoader
from torch.utils.data.distributed import DistributedSampler
from pytorch_lightning.root_module.root_module import LightningModule from pytorch_lightning.root_module.root_module import LightningModule
@@ -82,9 +84,10 @@ class LightningTemplateModel(LightningModule):
loss_val = self.loss(y, y_hat) loss_val = self.loss(y, y_hat)
output = OrderedDict({ output = OrderedDict({
'loss': loss_val, 'loss': loss_val
'tqdm_metrics': {}
}) })
# can also return just a scalar instead of a dict (return loss_val)
return output return output
def validation_step(self, data_batch, batch_i): def validation_step(self, data_batch, batch_i):
@@ -105,8 +108,10 @@ class LightningTemplateModel(LightningModule):
output = OrderedDict({ output = OrderedDict({
'val_loss': loss_val, 'val_loss': loss_val,
'val_acc': torch.tensor(val_acc), 'val_acc': torch.tensor(val_acc).cuda(loss_val.device.index),
}) })
# can also return just a scalar instead of a dict (return loss_val)
return output return output
def validation_end(self, outputs): def validation_end(self, outputs):
@@ -115,6 +120,10 @@ class LightningTemplateModel(LightningModule):
:param outputs: list of individual outputs of each validation step :param outputs: list of individual outputs of each validation step
:return: :return:
""" """
# if returned a scalar from validation_step, outputs is a list of tensor scalars
# we return just the average in this case (if we want)
# return torch.stack(outputs).mean()
val_loss_mean = 0 val_loss_mean = 0
val_acc_mean = 0 val_acc_mean = 0
for output in outputs: for output in outputs:
@@ -154,13 +163,25 @@ class LightningTemplateModel(LightningModule):
def __dataloader(self, train): def __dataloader(self, train):
# init data generators # init data generators
transform = transforms.Compose([transforms.ToTensor(), transforms.Normalize((0.5,), (1.0,))]) transform = transforms.Compose([transforms.ToTensor(), transforms.Normalize((0.5,), (1.0,))])
dataset = MNIST(root=self.hparams.data_root, train=train, transform=transform, download=True) dataset = MNIST(root=self.hparams.data_root, train=train, transform=transform, download=True)
loader = torch.utils.data.DataLoader( # when using multi-node we need to add the datasampler
train_sampler = None
batch_size = self.hparams.batch_size
try:
if self.on_gpu:
train_sampler = DistributedSampler(dataset, rank=self.trainer.proc_rank)
batch_size = batch_size // self.trainer.world_size # scale batch size
except Exception as e:
pass
should_shuffle = train_sampler is None
loader = DataLoader(
dataset=dataset, dataset=dataset,
batch_size=self.hparams.batch_size, batch_size=batch_size,
shuffle=True shuffle=should_shuffle,
sampler=train_sampler
) )
return loader return loader
@@ -210,16 +231,19 @@ class LightningTemplateModel(LightningModule):
# network params # network params
parser.opt_list('--drop_prob', default=0.2, options=[0.2, 0.5], type=float, tunable=False) parser.opt_list('--drop_prob', default=0.2, options=[0.2, 0.5], type=float, tunable=False)
parser.add_argument('--in_features', default=28*28) parser.add_argument('--in_features', default=28*28, type=int)
parser.add_argument('--out_features', default=10) parser.add_argument('--out_features', default=10, type=int)
parser.add_argument('--hidden_dim', default=50000) # use 500 for CPU, 50000 for GPU to see speed difference parser.add_argument('--hidden_dim', default=50000, type=int) # use 500 for CPU, 50000 for GPU to see speed difference
# data # data
parser.add_argument('--data_root', default=os.path.join(root_dir, 'mnist'), type=str) parser.add_argument('--data_root', default=os.path.join(root_dir, 'mnist'), type=str)
# training params (opt) # training params (opt)
parser.opt_list('--learning_rate', default=0.001, type=float, options=[0.0001, 0.0005, 0.001, 0.005], parser.opt_list('--learning_rate', default=0.001*8, type=float, options=[0.0001, 0.0005, 0.001, 0.005],
tunable=False) tunable=False)
parser.opt_list('--batch_size', default=256, type=int, options=[32, 64, 128, 256], tunable=False)
parser.opt_list('--optimizer_name', default='adam', type=str, options=['adam'], tunable=False) parser.opt_list('--optimizer_name', default='adam', type=str, options=['adam'], tunable=False)
# if using 2 nodes with 4 gpus each the batch size here (256) will be 256 / (2*8) = 16 per gpu
parser.opt_list('--batch_size', default=256*8, type=int, options=[32, 64, 128, 256], tunable=False,
help='batch size will be divided over all the gpus being used across all nodes')
return parser return parser
@@ -0,0 +1,172 @@
import os
import sys
import numpy as np
from time import sleep
import torch
from test_tube import HyperOptArgumentParser, Experiment, SlurmCluster
from pytorch_lightning.models.trainer import Trainer
from pytorch_lightning.utils.arg_parse import add_default_args
from pytorch_lightning.callbacks import EarlyStopping, ModelCheckpoint
SEED = 2334
torch.manual_seed(SEED)
np.random.seed(SEED)
# ---------------------
# DEFINE MODEL HERE
# ---------------------
from lightning_module_template import LightningTemplateModel
# ---------------------
"""
Allows training by using command line arguments
Run by:
# TYPE YOUR RUN COMMAND HERE
"""
def main_local(hparams):
main(hparams, None, None)
def main(hparams, cluster, results_dict):
"""
Main training routine specific for this project
:param hparams:
:return:
"""
# ------------------------
# 1 INIT LIGHTNING MODEL
# ------------------------
print('loading model...')
model = LightningTemplateModel(hparams)
print('model built')
# ------------------------
# 2 INIT TEST TUBE EXP
# ------------------------
# when using grid search, it's possible for all models to start at once
# and use the same test tube experiment version
relative_node_id = int(os.environ['SLURM_NODEID'])
sleep(relative_node_id + 1)
# init experiment
exp = Experiment(
name=hyperparams.experiment_name,
save_dir=hyperparams.test_tube_save_path,
autosave=False,
description='test demo'
)
exp.argparse(hparams)
exp.save()
# ------------------------
# 3 DEFINE CALLBACKS
# ------------------------
model_save_path = '{}/{}/{}'.format(hparams.model_save_path, exp.name, exp.version)
early_stop = EarlyStopping(
monitor='val_acc',
patience=3,
verbose=True,
mode='max'
)
checkpoint = ModelCheckpoint(
filepath=model_save_path,
save_best_only=True,
verbose=True,
monitor='val_loss',
mode='min'
)
# ------------------------
# 4 INIT TRAINER
# ------------------------
trainer = Trainer(
experiment=exp,
cluster=cluster,
checkpoint_callback=checkpoint,
early_stop_callback=early_stop,
gpus=hparams.gpus,
nb_gpu_nodes=hyperparams.nb_gpu_nodes
)
# ------------------------
# 5 START TRAINING
# ------------------------
trainer.fit(model)
def optimize_on_cluster(hyperparams):
# enable cluster training
# log all scripts to the test tube folder
cluster = SlurmCluster(
hyperparam_optimizer=hyperparams,
log_path=hyperparams.slurm_log_path,
)
# email for cluster coms
cluster.notify_job_status(email='add_email_here', on_done=True, on_fail=True)
# configure cluster
cluster.per_experiment_nb_gpus = hyperparams.per_experiment_nb_gpus
cluster.per_experiment_nb_nodes = hyperparams.nb_gpu_nodes
cluster.job_time = '2:00:00'
cluster.gpu_type = 'volta'
cluster.memory_mb_per_node = 0
# any modules for code to run in env
cluster.add_command('source activate lightning')
# run only on 32GB voltas
cluster.add_slurm_cmd(cmd='constraint', value='volta32gb', comment='use 32gb gpus')
cluster.add_slurm_cmd(cmd='partition', value=hyperparams.gpu_partition, comment='use 32gb gpus')
# run hopt
# creates and submits jobs to slurm
cluster.optimize_parallel_cluster_gpu(
main,
nb_trials=hyperparams.nb_hopt_trials,
job_name=hyperparams.experiment_name
)
if __name__ == '__main__':
# use default args
root_dir = os.path.dirname(os.path.realpath(__file__))
demo_log_dir = os.path.join(root_dir, 'pt_lightning_demo_logs')
checkpoint_dir = os.path.join(demo_log_dir, 'model_weights')
test_tube_dir = os.path.join(demo_log_dir, 'test_tube_data')
slurm_out_dir = os.path.join(demo_log_dir, 'slurm_scripts')
parent_parser = HyperOptArgumentParser(strategy='grid_search', add_help=False)
# cluster args not defined inside the model
parent_parser.add_argument('--gpu_partition', type=str, help='consult your cluster manual')
# TODO: make 1 param
parent_parser.add_argument('--per_experiment_nb_gpus', type=int, help='how many gpus to use in a node')
parent_parser.add_argument('--gpus', type=str, default='-1', help='how many gpus to use in the node')
parent_parser.add_argument('--nb_gpu_nodes', type=int, default=1, help='how many nodes to use in a cluster')
parent_parser.add_argument('--test_tube_save_path', type=str, default=test_tube_dir, help='where to save logs')
parent_parser.add_argument('--slurm_log_path', type=str, default=slurm_out_dir, help='where to save slurm meta')
parent_parser.add_argument('--model_save_path', type=str, default=checkpoint_dir, help='where to save model')
parent_parser.add_argument('--experiment_name', type=str, default='pt_lightning_exp_a', help='test tube exp name')
parent_parser.add_argument('--nb_hopt_trials', type=int, default=1, help='how many grid search trials to run')
# allow model to overwrite or extend args
parser = LightningTemplateModel.add_model_specific_args(parent_parser, root_dir)
hyperparams = parser.parse_args()
# ---------------------
# RUN TRAINING
# ---------------------
# run on HPC cluster
print('RUNNING ON SLURM CLUSTER')
optimize_on_cluster(hyperparams)
@@ -0,0 +1,110 @@
"""
Runs a model on a single node across N-gpus.
"""
import os
import sys
import numpy as np
from time import sleep
import torch
from test_tube import HyperOptArgumentParser, Experiment, SlurmCluster
from pytorch_lightning.models.trainer import Trainer
from pytorch_lightning.utils.arg_parse import add_default_args
from pytorch_lightning.callbacks import EarlyStopping, ModelCheckpoint
SEED = 2334
torch.manual_seed(SEED)
np.random.seed(SEED)
from lightning_module_template import LightningTemplateModel
def main(hparams):
"""
Main training routine specific for this project
:param hparams:
:return:
"""
# ------------------------
# 1 INIT LIGHTNING MODEL
# ------------------------
print('loading model...')
model = LightningTemplateModel(hparams)
print('model built')
# ------------------------
# 2 INIT TEST TUBE EXP
# ------------------------
# init experiment
exp = Experiment(
name=hyperparams.experiment_name,
save_dir=hyperparams.test_tube_save_path,
autosave=False,
description='test demo'
)
exp.argparse(hparams)
exp.save()
# ------------------------
# 3 DEFINE CALLBACKS
# ------------------------
model_save_path = '{}/{}/{}'.format(hparams.model_save_path, exp.name, exp.version)
early_stop = EarlyStopping(
monitor='val_acc',
patience=3,
verbose=True,
mode='max'
)
checkpoint = ModelCheckpoint(
filepath=model_save_path,
save_best_only=True,
verbose=True,
monitor='val_loss',
mode='min'
)
# ------------------------
# 4 INIT TRAINER
# ------------------------
trainer = Trainer(
experiment=exp,
checkpoint_callback=checkpoint,
early_stop_callback=early_stop,
)
# ------------------------
# 5 START TRAINING
# ------------------------
trainer.fit(model)
if __name__ == '__main__':
# dirs
root_dir = os.path.dirname(os.path.realpath(__file__))
demo_log_dir = os.path.join(root_dir, 'pt_lightning_demo_logs')
checkpoint_dir = os.path.join(demo_log_dir, 'model_weights')
test_tube_dir = os.path.join(demo_log_dir, 'test_tube_data')
# although we user hyperOptParser, we are using it only as argparse right now
parent_parser = HyperOptArgumentParser(strategy='grid_search', add_help=False)
# gpu args
parent_parser.add_argument('--test_tube_save_path', type=str, default=test_tube_dir, help='where to save logs')
parent_parser.add_argument('--model_save_path', type=str, default=checkpoint_dir, help='where to save model')
parent_parser.add_argument('--experiment_name', type=str, default='pt_lightning_exp_a', help='test tube exp name')
# allow model to overwrite or extend args
parser = LightningTemplateModel.add_model_specific_args(parent_parser, root_dir)
hyperparams = parser.parse_args()
# ---------------------
# RUN TRAINING
# ---------------------
# run on HPC cluster
print(f'RUNNING ON CPU')
main(hyperparams)
@@ -0,0 +1,113 @@
"""
Runs a model on a single node across N-gpus.
"""
import os
import sys
import numpy as np
from time import sleep
import torch
from test_tube import HyperOptArgumentParser, Experiment, SlurmCluster
from pytorch_lightning.models.trainer import Trainer
from pytorch_lightning.utils.arg_parse import add_default_args
from pytorch_lightning.callbacks import EarlyStopping, ModelCheckpoint
SEED = 2334
torch.manual_seed(SEED)
np.random.seed(SEED)
from lightning_module_template import LightningTemplateModel
def main(hparams):
"""
Main training routine specific for this project
:param hparams:
:return:
"""
# ------------------------
# 1 INIT LIGHTNING MODEL
# ------------------------
print('loading model...')
model = LightningTemplateModel(hparams)
print('model built')
# ------------------------
# 2 INIT TEST TUBE EXP
# ------------------------
# init experiment
exp = Experiment(
name=hyperparams.experiment_name,
save_dir=hyperparams.test_tube_save_path,
autosave=False,
description='test demo'
)
exp.argparse(hparams)
exp.save()
# ------------------------
# 3 DEFINE CALLBACKS
# ------------------------
model_save_path = '{}/{}/{}'.format(hparams.model_save_path, exp.name, exp.version)
early_stop = EarlyStopping(
monitor='val_acc',
patience=3,
verbose=True,
mode='max'
)
checkpoint = ModelCheckpoint(
filepath=model_save_path,
save_best_only=True,
verbose=True,
monitor='val_loss',
mode='min'
)
# ------------------------
# 4 INIT TRAINER
# ------------------------
trainer = Trainer(
experiment=exp,
checkpoint_callback=checkpoint,
early_stop_callback=early_stop,
gpus=hparams.gpus,
use_amp=True
)
# ------------------------
# 5 START TRAINING
# ------------------------
trainer.fit(model)
if __name__ == '__main__':
# dirs
root_dir = os.path.dirname(os.path.realpath(__file__))
demo_log_dir = os.path.join(root_dir, 'pt_lightning_demo_logs')
checkpoint_dir = os.path.join(demo_log_dir, 'model_weights')
test_tube_dir = os.path.join(demo_log_dir, 'test_tube_data')
# although we user hyperOptParser, we are using it only as argparse right now
parent_parser = HyperOptArgumentParser(strategy='grid_search', add_help=False)
# gpu args
parent_parser.add_argument('--gpus', type=str, default='-1', help='how many gpus to use in the node. -1 uses all the gpus on the node')
parent_parser.add_argument('--test_tube_save_path', type=str, default=test_tube_dir, help='where to save logs')
parent_parser.add_argument('--model_save_path', type=str, default=checkpoint_dir, help='where to save model')
parent_parser.add_argument('--experiment_name', type=str, default='pt_lightning_exp_a', help='test tube exp name')
# allow model to overwrite or extend args
parser = LightningTemplateModel.add_model_specific_args(parent_parser, root_dir)
hyperparams = parser.parse_args()
# ---------------------
# RUN TRAINING
# ---------------------
# run on HPC cluster
print(f'RUNNING INTERACTIVE MODE ON GPUS. gpu ids: {hyperparams.gpus}')
main(hyperparams)
@@ -0,0 +1,112 @@
"""
Runs a model on a single node across N-gpus.
"""
import os
import sys
import numpy as np
from time import sleep
import torch
from test_tube import HyperOptArgumentParser, Experiment, SlurmCluster
from pytorch_lightning.models.trainer import Trainer
from pytorch_lightning.utils.arg_parse import add_default_args
from pytorch_lightning.callbacks import EarlyStopping, ModelCheckpoint
SEED = 2334
torch.manual_seed(SEED)
np.random.seed(SEED)
from lightning_module_template import LightningTemplateModel
def main(hparams):
"""
Main training routine specific for this project
:param hparams:
:return:
"""
# ------------------------
# 1 INIT LIGHTNING MODEL
# ------------------------
print('loading model...')
model = LightningTemplateModel(hparams)
print('model built')
# ------------------------
# 2 INIT TEST TUBE EXP
# ------------------------
# init experiment
exp = Experiment(
name=hyperparams.experiment_name,
save_dir=hyperparams.test_tube_save_path,
autosave=False,
description='test demo'
)
exp.argparse(hparams)
exp.save()
# ------------------------
# 3 DEFINE CALLBACKS
# ------------------------
model_save_path = '{}/{}/{}'.format(hparams.model_save_path, exp.name, exp.version)
early_stop = EarlyStopping(
monitor='val_acc',
patience=3,
verbose=True,
mode='max'
)
checkpoint = ModelCheckpoint(
filepath=model_save_path,
save_best_only=True,
verbose=True,
monitor='val_loss',
mode='min'
)
# ------------------------
# 4 INIT TRAINER
# ------------------------
trainer = Trainer(
experiment=exp,
checkpoint_callback=checkpoint,
early_stop_callback=early_stop,
gpus=hparams.gpus,
)
# ------------------------
# 5 START TRAINING
# ------------------------
trainer.fit(model)
if __name__ == '__main__':
# dirs
root_dir = os.path.dirname(os.path.realpath(__file__))
demo_log_dir = os.path.join(root_dir, 'pt_lightning_demo_logs')
checkpoint_dir = os.path.join(demo_log_dir, 'model_weights')
test_tube_dir = os.path.join(demo_log_dir, 'test_tube_data')
# although we user hyperOptParser, we are using it only as argparse right now
parent_parser = HyperOptArgumentParser(strategy='grid_search', add_help=False)
# gpu args
parent_parser.add_argument('--gpus', type=str, default='-1', help='how many gpus to use in the node. -1 uses all the gpus on the node')
parent_parser.add_argument('--test_tube_save_path', type=str, default=test_tube_dir, help='where to save logs')
parent_parser.add_argument('--model_save_path', type=str, default=checkpoint_dir, help='where to save model')
parent_parser.add_argument('--experiment_name', type=str, default='pt_lightning_exp_a', help='test tube exp name')
# allow model to overwrite or extend args
parser = LightningTemplateModel.add_model_specific_args(parent_parser, root_dir)
hyperparams = parser.parse_args()
# ---------------------
# RUN TRAINING
# ---------------------
# run on HPC cluster
print(f'RUNNING INTERACTIVE MODE ON GPUS. gpu ids: {hyperparams.gpus}')
main(hyperparams)
@@ -0,0 +1,112 @@
"""
Runs a model on a single node across N-gpus.
"""
import os
import sys
import numpy as np
from time import sleep
import torch
from test_tube import HyperOptArgumentParser, Experiment, SlurmCluster
from pytorch_lightning.models.trainer import Trainer
from pytorch_lightning.utils.arg_parse import add_default_args
from pytorch_lightning.callbacks import EarlyStopping, ModelCheckpoint
SEED = 2334
torch.manual_seed(SEED)
np.random.seed(SEED)
from lightning_module_template import LightningTemplateModel
def main(hparams):
"""
Main training routine specific for this project
:param hparams:
:return:
"""
# ------------------------
# 1 INIT LIGHTNING MODEL
# ------------------------
print('loading model...')
model = LightningTemplateModel(hparams)
print('model built')
# ------------------------
# 2 INIT TEST TUBE EXP
# ------------------------
# init experiment
exp = Experiment(
name=hyperparams.experiment_name,
save_dir=hyperparams.test_tube_save_path,
autosave=False,
description='test demo'
)
exp.argparse(hparams)
exp.save()
# ------------------------
# 3 DEFINE CALLBACKS
# ------------------------
model_save_path = '{}/{}/{}'.format(hparams.model_save_path, exp.name, exp.version)
early_stop = EarlyStopping(
monitor='val_acc',
patience=3,
verbose=True,
mode='max'
)
checkpoint = ModelCheckpoint(
filepath=model_save_path,
save_best_only=True,
verbose=True,
monitor='val_loss',
mode='min'
)
# ------------------------
# 4 INIT TRAINER
# ------------------------
trainer = Trainer(
experiment=exp,
checkpoint_callback=checkpoint,
early_stop_callback=early_stop,
gpus=hparams.gpus,
)
# ------------------------
# 5 START TRAINING
# ------------------------
trainer.fit(model)
if __name__ == '__main__':
# dirs
root_dir = os.path.dirname(os.path.realpath(__file__))
demo_log_dir = os.path.join(root_dir, 'pt_lightning_demo_logs')
checkpoint_dir = os.path.join(demo_log_dir, 'model_weights')
test_tube_dir = os.path.join(demo_log_dir, 'test_tube_data')
# although we user hyperOptParser, we are using it only as argparse right now
parent_parser = HyperOptArgumentParser(strategy='grid_search', add_help=False)
# gpu args
parent_parser.add_argument('--gpus', type=str, default='-1', help='how many gpus to use in the node. -1 uses all the gpus on the node')
parent_parser.add_argument('--test_tube_save_path', type=str, default=test_tube_dir, help='where to save logs')
parent_parser.add_argument('--model_save_path', type=str, default=checkpoint_dir, help='where to save model')
parent_parser.add_argument('--experiment_name', type=str, default='pt_lightning_exp_a', help='test tube exp name')
# allow model to overwrite or extend args
parser = LightningTemplateModel.add_model_specific_args(parent_parser, root_dir)
hyperparams = parser.parse_args()
# ---------------------
# RUN TRAINING
# ---------------------
# run on HPC cluster
print(f'RUNNING INTERACTIVE MODE ON GPUS. gpu ids: {hyperparams.gpus}')
main(hyperparams)
@@ -0,0 +1,112 @@
"""
Runs a model on a single node across N-gpus.
"""
import os
import sys
import numpy as np
from time import sleep
import torch
from test_tube import HyperOptArgumentParser, Experiment, SlurmCluster
from pytorch_lightning.models.trainer import Trainer
from pytorch_lightning.utils.arg_parse import add_default_args
from pytorch_lightning.callbacks import EarlyStopping, ModelCheckpoint
SEED = 2334
torch.manual_seed(SEED)
np.random.seed(SEED)
from lightning_module_template import LightningTemplateModel
def main(hparams):
"""
Main training routine specific for this project
:param hparams:
:return:
"""
# ------------------------
# 1 INIT LIGHTNING MODEL
# ------------------------
print('loading model...')
model = LightningTemplateModel(hparams)
print('model built')
# ------------------------
# 2 INIT TEST TUBE EXP
# ------------------------
# init experiment
exp = Experiment(
name=hyperparams.experiment_name,
save_dir=hyperparams.test_tube_save_path,
autosave=False,
description='test demo'
)
exp.argparse(hparams)
exp.save()
# ------------------------
# 3 DEFINE CALLBACKS
# ------------------------
model_save_path = '{}/{}/{}'.format(hparams.model_save_path, exp.name, exp.version)
early_stop = EarlyStopping(
monitor='val_acc',
patience=3,
verbose=True,
mode='max'
)
checkpoint = ModelCheckpoint(
filepath=model_save_path,
save_best_only=True,
verbose=True,
monitor='val_loss',
mode='min'
)
# ------------------------
# 4 INIT TRAINER
# ------------------------
trainer = Trainer(
experiment=exp,
checkpoint_callback=checkpoint,
early_stop_callback=early_stop,
gpus=hparams.gpus,
)
# ------------------------
# 5 START TRAINING
# ------------------------
trainer.fit(model)
if __name__ == '__main__':
# dirs
root_dir = os.path.dirname(os.path.realpath(__file__))
demo_log_dir = os.path.join(root_dir, 'pt_lightning_demo_logs')
checkpoint_dir = os.path.join(demo_log_dir, 'model_weights')
test_tube_dir = os.path.join(demo_log_dir, 'test_tube_data')
# although we user hyperOptParser, we are using it only as argparse right now
parent_parser = HyperOptArgumentParser(strategy='grid_search', add_help=False)
# gpu args
parent_parser.add_argument('--gpus', type=str, default='0', help='how many gpus to use in the node. -1 uses all the gpus on the node')
parent_parser.add_argument('--test_tube_save_path', type=str, default=test_tube_dir, help='where to save logs')
parent_parser.add_argument('--model_save_path', type=str, default=checkpoint_dir, help='where to save model')
parent_parser.add_argument('--experiment_name', type=str, default='pt_lightning_exp_a', help='test tube exp name')
# allow model to overwrite or extend args
parser = LightningTemplateModel.add_model_specific_args(parent_parser, root_dir)
hyperparams = parser.parse_args()
# ---------------------
# RUN TRAINING
# ---------------------
# run on HPC cluster
print(f'RUNNING INTERACTIVE MODE ON GPUS. gpu ids: {hyperparams.gpus}')
main(hyperparams)
@@ -1,208 +0,0 @@
import os
import sys
import numpy as np
from time import sleep
import torch
from test_tube import HyperOptArgumentParser, Experiment, SlurmCluster
from pytorch_lightning.models.trainer import Trainer
from pytorch_lightning.utils.arg_parse import add_default_args
from pytorch_lightning.callbacks import EarlyStopping, ModelCheckpoint
SEED = 2334
torch.manual_seed(SEED)
np.random.seed(SEED)
# ---------------------
# DEFINE MODEL HERE
# ---------------------
from lightning_module_template import LightningTemplateModel
# ---------------------
AVAILABLE_MODELS = {
'model_template': LightningTemplateModel
}
"""
Allows training by using command line arguments
Run by:
# TYPE YOUR RUN COMMAND HERE
"""
def main_local(hparams):
main(hparams, None, None)
def main(hparams, cluster, results_dict):
"""
Main training routine specific for this project
:param hparams:
:return:
"""
on_gpu = hparams.gpus is not None and torch.cuda.is_available()
device = 'cuda' if on_gpu else 'cpu'
hparams.__setattr__('device', device)
hparams.__setattr__('on_gpu', on_gpu)
hparams.__setattr__('nb_gpus', torch.cuda.device_count())
hparams.__setattr__('inference_mode', hparams.model_load_weights_path is not None)
# delay each training start to not overwrite logs
process_position, current_gpu = TRAINING_MODEL.get_process_position(hparams.gpus)
sleep(process_position + 1)
# init experiment
log_dir = os.path.dirname(os.path.realpath(__file__))
log_dir = os.path.join(log_dir, 'test_tube_demo_logs')
exp = Experiment(
name='test_tube_exp',
save_dir=log_dir,
autosave=False,
description='test demo'
)
exp.argparse(hparams)
exp.save()
# build model
print('loading model...')
model = TRAINING_MODEL(hparams)
print('model built')
# callbacks
early_stop = EarlyStopping(
monitor=hparams.early_stop_metric,
patience=hparams.early_stop_patience,
verbose=True,
mode=hparams.early_stop_mode
)
model_save_path = '{}/{}/{}'.format(hparams.model_save_path, exp.name, exp.version)
checkpoint = ModelCheckpoint(
filepath=model_save_path,
save_best_only=True,
verbose=True,
monitor=hparams.model_save_monitor_value,
mode=hparams.model_save_monitor_mode
)
# gpus are ; separated for inside a node and , within nodes
gpu_list = None
if hparams.gpus is not None:
gpu_list = [int(x) for x in hparams.gpus.split(';')]
# configure trainer
trainer = Trainer(
experiment=exp,
cluster=cluster,
checkpoint_callback=checkpoint,
early_stop_callback=early_stop,
gpus=gpu_list,
)
# train model
trainer.fit(model)
def get_default_parser(strategy, root_dir):
possible_model_names = list(AVAILABLE_MODELS.keys())
parser = HyperOptArgumentParser(strategy=strategy, add_help=False)
add_default_args(parser, root_dir, possible_model_names=possible_model_names, rand_seed=SEED)
return parser
def get_model_name(args):
for i, arg in enumerate(args):
if 'model_name' in arg:
return args[i+1]
def optimize_on_cluster(hyperparams):
# enable cluster training
cluster = SlurmCluster(
hyperparam_optimizer=hyperparams,
log_path=hyperparams.tt_save_path,
test_tube_exp_name=hyperparams.tt_name
)
# email for cluster coms
cluster.notify_job_status(email='add_email_here', on_done=True, on_fail=True)
# configure cluster
cluster.per_experiment_nb_gpus = hyperparams.per_experiment_nb_gpus
cluster.job_time = '48:00:00'
cluster.gpu_type = '1080ti'
cluster.memory_mb_per_node = 48000
# any modules for code to run in env
cluster.add_command('source activate pytorch_lightning')
# name of exp
job_display_name = hyperparams.tt_name.split('_')[0]
job_display_name = job_display_name[0:3]
# run hopt
print('submitting jobs...')
cluster.optimize_parallel_cluster_gpu(
main,
nb_trials=hyperparams.nb_hopt_trials,
job_name=job_display_name
)
if __name__ == '__main__':
model_name = get_model_name(sys.argv)
if model_name is None:
model_name = 'model_template'
# use default args
root_dir = os.path.dirname(os.path.realpath(__file__))
parent_parser = get_default_parser(strategy='random_search', root_dir=root_dir)
# allow model to overwrite or extend args
TRAINING_MODEL = AVAILABLE_MODELS[model_name]
parser = TRAINING_MODEL.add_model_specific_args(parent_parser, root_dir)
hyperparams = parser.parse_args()
# format GPU layout
os.environ["CUDA_DEVICE_ORDER"] = "PCI_BUS_ID"
# ---------------------
# RUN TRAINING
# ---------------------
# cluster and CPU
if hyperparams.on_cluster:
# run on HPC cluster
print('RUNNING ON SLURM CLUSTER')
gpu_ids = hyperparams.gpus.split(';')
os.environ["CUDA_VISIBLE_DEVICES"] = ','.join(gpu_ids)
optimize_on_cluster(hyperparams)
elif hyperparams.gpus is None:
# run on cpu
print('RUNNING ON CPU')
main(hyperparams, None, None)
# single or multiple GPUs on same machine
gpu_ids = hyperparams.gpus.split(';')
if hyperparams.interactive:
# run on 1 gpu
print(f'RUNNING INTERACTIVE MODE ON GPUS. gpu ids: {gpu_ids}')
os.environ["CUDA_VISIBLE_DEVICES"] = ','.join(gpu_ids)
main(hyperparams, None, None)
else:
# multiple GPUs on same machine
print(f'RUNNING MULTI GPU. GPU ids: {gpu_ids}')
hyperparams.optimize_parallel_gpu(
main_local,
gpu_ids=gpu_ids,
nb_trials=hyperparams.nb_hopt_trials,
nb_workers=len(gpu_ids)
)
+1
View File
@@ -1 +1,2 @@
from .models import Trainer from .models import Trainer
from .root_module.root_module import LightningModule
+2 -2
View File
@@ -1,6 +1,6 @@
import numpy as np import numpy as np
import os, shutil import os, shutil
from pytorch_lightning.pt_overrides.override_data_parallel import LightningDataParallel from pytorch_lightning.pt_overrides.override_data_parallel import LightningDistributedDataParallel
class Callback(object): class Callback(object):
@@ -34,7 +34,7 @@ class Callback(object):
self.params = params self.params = params
def set_model(self, model): def set_model(self, model):
if type(model) is LightningDataParallel: if type(model) is LightningDistributedDataParallel:
model = model.module model = model.module
self.model = model self.model = model
+372 -59
View File
@@ -1,12 +1,25 @@
import torch """
import tqdm The trainer handles all the logic for running a val loop, training loop, distributing, etc...
import numpy as np """
from pytorch_lightning.root_module.memory import get_gpu_memory_map import subprocess
import traceback import traceback
from pytorch_lightning.root_module.model_saving import TrainerIO import warnings
from torch.optim.lr_scheduler import MultiStepLR import os
from pytorch_lightning.pt_overrides.override_data_parallel import LightningDataParallel
import pdb import pdb
import re
import torch
from torch.utils.data.distributed import DistributedSampler
from torch.optim.lr_scheduler import MultiStepLR
import torch.multiprocessing as mp
import torch.distributed as dist
import numpy as np
import tqdm
from pytorch_lightning.root_module.memory import get_gpu_memory_map
from pytorch_lightning.root_module.model_saving import TrainerIO
from pytorch_lightning.pt_overrides.override_data_parallel import LightningDistributedDataParallel, LightningDataParallel
try: try:
from apex import amp from apex import amp
@@ -16,6 +29,14 @@ except ModuleNotFoundError:
def reduce_distributed_output(output, nb_gpus): def reduce_distributed_output(output, nb_gpus):
if nb_gpus <= 1:
return output
# when using DP, we get one output per gpu
# average outputs and return
if type(output) is torch.Tensor:
return output.mean()
for k, v in output.items(): for k, v in output.items():
# recurse on nested dics # recurse on nested dics
if isinstance(output[k], dict): if isinstance(output[k], dict):
@@ -32,11 +53,13 @@ class Trainer(TrainerIO):
def __init__(self, def __init__(self,
experiment, experiment,
checkpoint_callback, early_stop_callback, early_stop_callback=None,
checkpoint_callback=None,
gradient_clip=0, gradient_clip=0,
cluster=None, cluster=None,
process_position=0, process_position=0,
current_gpu_name=0, current_gpu_name=0,
nb_gpu_nodes=1,
gpus=None, gpus=None,
progress_bar=True, progress_bar=True,
overfit_pct=0.0, overfit_pct=0.0,
@@ -44,19 +67,57 @@ class Trainer(TrainerIO):
check_val_every_n_epoch=1, check_val_every_n_epoch=1,
fast_dev_run=False, fast_dev_run=False,
accumulate_grad_batches=1, accumulate_grad_batches=1,
enable_early_stop=True, max_nb_epochs=1000, min_nb_epochs=1, max_nb_epochs=1000, min_nb_epochs=1,
train_percent_check=1.0, val_percent_check=1.0, test_percent_check=1.0, val_check_interval=0.95, train_percent_check=1.0, val_percent_check=1.0, test_percent_check=1.0,
val_check_interval=0.95,
log_save_interval=100, add_log_row_interval=10, log_save_interval=100, add_log_row_interval=10,
lr_scheduler_milestones=None, lr_scheduler_milestones=None,
distributed_backend='dp',
use_amp=False, use_amp=False,
print_nan_grads=False, print_nan_grads=False,
print_weights_summary=True,
amp_level='O2', amp_level='O2',
nb_sanity_val_steps=5): nb_sanity_val_steps=5):
"""
:param experiment: Test-tube experiment
:param early_stop_callback: from pytorch_lightning import EarlyStopping
:param checkpoint_callback: from pytorch_lightning import Checkpoint
:param gradient_clip:
:param cluster:
:param process_position:
:param current_gpu_name:
:param nb_gpu_nodes:
:param gpus:
:param progress_bar:
:param overfit_pct:
:param track_grad_norm:
:param check_val_every_n_epoch:
:param fast_dev_run:
:param accumulate_grad_batches:
:param max_nb_epochs:
:param min_nb_epochs:
:param train_percent_check:
:param val_percent_check:
:param test_percent_check:
:param val_check_interval:
:param log_save_interval:
:param add_log_row_interval:
:param lr_scheduler_milestones:
:param distributed_backend: 'np' to use DistributedParallel, 'ddp' to use DistributedDataParallel
:param use_amp:
:param print_nan_grads:
:param print_weights_summary:
:param amp_level:
:param nb_sanity_val_steps:
"""
# Transfer params # Transfer params
self.nb_gpu_nodes = nb_gpu_nodes
self.gradient_clip = gradient_clip self.gradient_clip = gradient_clip
self.check_val_every_n_epoch = check_val_every_n_epoch self.check_val_every_n_epoch = check_val_every_n_epoch
self.enable_early_stop = enable_early_stop self.enable_early_stop = early_stop_callback is not None
self.track_grad_norm = track_grad_norm self.track_grad_norm = track_grad_norm
self.fast_dev_run = fast_dev_run self.fast_dev_run = fast_dev_run
self.on_gpu = gpus is not None and torch.cuda.is_available() self.on_gpu = gpus is not None and torch.cuda.is_available()
@@ -66,8 +127,12 @@ class Trainer(TrainerIO):
self.cluster = cluster self.cluster = cluster
self.process_position = process_position self.process_position = process_position
self.current_gpu_name = current_gpu_name self.current_gpu_name = current_gpu_name
self.print_weights_summary = print_weights_summary
self.checkpoint_callback = checkpoint_callback self.checkpoint_callback = checkpoint_callback
if self.checkpoint_callback is not None:
self.checkpoint_callback.save_function = self.save_checkpoint self.checkpoint_callback.save_function = self.save_checkpoint
self.early_stop = early_stop_callback self.early_stop = early_stop_callback
self.model = None self.model = None
self.max_nb_epochs = max_nb_epochs self.max_nb_epochs = max_nb_epochs
@@ -79,8 +144,40 @@ class Trainer(TrainerIO):
self.lr_schedulers = [] self.lr_schedulers = []
self.amp_level = amp_level self.amp_level = amp_level
self.print_nan_grads = print_nan_grads self.print_nan_grads = print_nan_grads
self.data_parallel_device_ids = None
self.world_size = 1
self.node_rank = 0
self.use_ddp = False
self.use_dp = False
# gpus come in as a string.
# if gpus = -1 then use all available devices
# otherwise, split the string using commas
if gpus is not None:
if type(gpus) is list:
self.data_parallel_device_ids = gpus self.data_parallel_device_ids = gpus
self.data_parallel = gpus is not None and len(gpus) > 0 elif type(gpus) is str:
if gpus == '-1':
self.data_parallel_device_ids = list(range(0, torch.cuda.device_count()))
else:
self.data_parallel_device_ids = [int(x.strip()) for x in gpus.split(',')]
else:
raise Exception('gpus has to be a string or list of ids')
# set the correct cuda visible devices (using pci order)
os.environ["CUDA_DEVICE_ORDER"] = "PCI_BUS_ID"
os.environ["CUDA_VISIBLE_DEVICES"] = ','.join([str(x) for x in self.data_parallel_device_ids])
print(f'VISIBLE GPUS: {os.environ["CUDA_VISIBLE_DEVICES"]}')
# make DP and DDP mutually exclusive
# single GPU will also use DP with devices=[0]
have_gpus = self.data_parallel_device_ids is not None and len(self.data_parallel_device_ids) > 0
if have_gpus:
self.use_dp = distributed_backend == 'dp'
self.use_ddp = distributed_backend == 'ddp'
# process info
self.proc_rank = 0
# training state # training state
self.optimizers = None self.optimizers = None
@@ -103,11 +200,25 @@ class Trainer(TrainerIO):
self.__determine_data_use_amount(train_percent_check, val_percent_check, test_percent_check, overfit_pct) self.__determine_data_use_amount(train_percent_check, val_percent_check, test_percent_check, overfit_pct)
print('gpu available: {}, used: {}'.format(torch.cuda.is_available(), self.on_gpu)) print('gpu available: {}, used: {}'.format(torch.cuda.is_available(), self.on_gpu))
# apex test # 16 bit mixed precision training using apex
self.use_amp = use_amp and APEX_AVAILABLE self.use_amp = use_amp and APEX_AVAILABLE
if self.use_amp: if self.use_amp:
print('using 16bit precision') print('using 16bit precision')
if use_amp and not APEX_AVAILABLE:
msg = '''
You set use_amp=True but do not have apex installed.
Install apex first using this guide and rerun with use_amp=True:
https://github.com/NVIDIA/apex#linux
this run will NOT use 16 bit precision
'''
warnings.warn(msg)
@property
def data_parallel(self):
return self.use_dp or self.use_ddp
def __determine_data_use_amount(self, train_percent_check, val_percent_check, test_percent_check, overfit_pct): def __determine_data_use_amount(self, train_percent_check, val_percent_check, test_percent_check, overfit_pct):
""" """
Use less data for debugging purposes Use less data for debugging purposes
@@ -120,8 +231,12 @@ class Trainer(TrainerIO):
self.val_percent_check = overfit_pct self.val_percent_check = overfit_pct
self.test_percent_check = overfit_pct self.test_percent_check = overfit_pct
def __get_model(self):
return self.model.module if self.data_parallel else self.model
def __is_function_implemented(self, f_name): def __is_function_implemented(self, f_name):
f_op = getattr(self.model, f_name, None) model = self.__get_model()
f_op = getattr(model, f_name, None)
return callable(f_op) return callable(f_op)
@property @property
@@ -139,7 +254,7 @@ class Trainer(TrainerIO):
return tqdm_dic return tqdm_dic
def __layout_bookeeping(self, model): def __layout_bookeeping(self):
# training bookeeping # training bookeeping
self.total_batch_nb = 0 self.total_batch_nb = 0
self.running_loss = [] self.running_loss = []
@@ -148,17 +263,17 @@ class Trainer(TrainerIO):
self.tqdm_metrics = {} self.tqdm_metrics = {}
# determine number of training batches # determine number of training batches
self.nb_tng_batches = model.nb_batches(self.tng_dataloader) self.nb_tng_batches = len(self.tng_dataloader)
self.nb_tng_batches = int(self.nb_tng_batches * self.train_percent_check) self.nb_tng_batches = int(self.nb_tng_batches * self.train_percent_check)
# determine number of validation batches # determine number of validation batches
self.nb_val_batches = model.nb_batches(self.val_dataloader) self.nb_val_batches = len(self.val_dataloader)
self.nb_val_batches = int(self.nb_val_batches * self.val_percent_check) self.nb_val_batches = int(self.nb_val_batches * self.val_percent_check)
self.nb_val_batches = max(1, self.nb_val_batches) self.nb_val_batches = max(1, self.nb_val_batches)
self.nb_val_batches = self.nb_val_batches self.nb_val_batches = self.nb_val_batches
# determine number of test batches # determine number of test batches
self.nb_test_batches = model.nb_batches(self.test_dataloader) self.nb_test_batches = len(self.test_dataloader)
self.nb_test_batches = int(self.nb_test_batches * self.test_percent_check) self.nb_test_batches = int(self.nb_test_batches * self.test_percent_check)
# determine when to check validation # determine when to check validation
@@ -179,12 +294,9 @@ class Trainer(TrainerIO):
:param max_batches: Scalar :param max_batches: Scalar
:return: :return:
""" """
print('validating...')
# enable eval mode # enable eval mode
model.zero_grad() model.zero_grad()
model.eval() model.eval()
model.from_lightning = True
# disable gradients to save memory # disable gradients to save memory
torch.set_grad_enabled(False) torch.set_grad_enabled(False)
@@ -205,9 +317,12 @@ class Trainer(TrainerIO):
# ----------------- # -----------------
# RUN VALIDATION STEP # RUN VALIDATION STEP
# ----------------- # -----------------
if self.data_parallel: if self.use_ddp:
output = model(data_batch, batch_i)
elif self.use_dp:
output = model(data_batch, batch_i) output = model(data_batch, batch_i)
output = reduce_distributed_output(output, len(self.data_parallel_device_ids)) output = reduce_distributed_output(output, len(self.data_parallel_device_ids))
else: else:
output = model.validation_step(data_batch, batch_i) output = model.validation_step(data_batch, batch_i)
@@ -241,32 +356,208 @@ class Trainer(TrainerIO):
self.test_dataloader = model.test_dataloader self.test_dataloader = model.test_dataloader
self.val_dataloader = model.val_dataloader self.val_dataloader = model.val_dataloader
if self.use_ddp and not isinstance(self.tng_dataloader.sampler, DistributedSampler):
msg = '''
when using multiple gpus and multiple nodes you must pass a DistributedSampler to DataLoader(sampler).
ie: this:
dataset = myDataset()
dataloader = Dataloader(dataset)
becomes:
dataset = myDataset()
dist_sampler = torch.utils.data.distributed.DistributedSampler(dataset)
dataloader = Dataloader(dataset, sampler=dist_sampler)
'''
raise Exception(msg)
# ----------------------------- # -----------------------------
# MODEL TRAINING # MODEL TRAINING
# ----------------------------- # -----------------------------
def fit(self, model): def fit(self, model):
# give model convenience properties # when using multi-node or DDP within a node start each module in a separate process
model.trainer = self if self.use_ddp:
model.experiment = self.experiment # must copy only the meta of the exp so it survives pickle/unpickle when going to new process
self.experiment = self.experiment.get_meta_copy()
# transfer data loaders from model # whenever we have the correct number of tasks, we let slurm manage processes
self.__get_dataloaders(model) # otherwise we launch the required number of processes
try:
nb_slurm_tasks = int(os.environ['SLURM_NTASKS'])
nb_requested_gpus = len(self.data_parallel_device_ids) * self.nb_gpu_nodes
is_slurm_managing_tasks = nb_slurm_tasks == nb_requested_gpus
except Exception as e:
# likely not on slurm, so set the slurm managed flag to false
is_slurm_managing_tasks = False
# init training constants if is_slurm_managing_tasks:
self.__layout_bookeeping(model) task = int(os.environ['SLURM_LOCALID'])
self.ddp_train(task, model)
else:
msg = f"""
You requested {nb_requested_gpus} GPUs but launched {nb_slurm_tasks} slurm tasks.
We will launch {nb_requested_gpus} processes for you.
We recommend you let slurm manage the processes by setting: --ntasks-per-node={nb_requested_gpus}
If you're not using SLURM, ignore this message!
"""
warnings.warn(msg)
mp.spawn(self.ddp_train, nprocs=len(self.data_parallel_device_ids), args=(model, ))
# 1 gpu or dp option triggers training using DP module
# easier to avoid NCCL issues
elif self.use_dp:
self.dp_train(model)
# ON CPU
else:
# CHOOSE OPTIMIZER
# filter out the weights that were done on gpu so we can load on good old cpus
self.optimizers = model.configure_optimizers()
# run through amp wrapper
if self.use_amp:
# An example
model, optimizers = amp.initialize(
model, self.optimizers, opt_level=self.amp_level,
)
self.optimizers = optimizers
self.__run_pretrain_routine(model)
def dp_train(self, model):
# CHOOSE OPTIMIZER # CHOOSE OPTIMIZER
# filter out the weights that were done on gpu so we can load on good old cpus # filter out the weights that were done on gpu so we can load on good old cpus
self.optimizers = model.configure_optimizers() self.optimizers = model.configure_optimizers()
model.cuda(self.data_parallel_device_ids[0])
model = LightningDataParallel(model, device_ids=self.data_parallel_device_ids)
# run through amp wrapper
if self.use_amp: if self.use_amp:
# An example # An example
model, optimizer = amp.initialize( model, optimizers = amp.initialize(
model, self.optimizers[0], opt_level=self.amp_level, model, self.optimizers, opt_level=self.amp_level,
) )
self.optimizers[0] = optimizer self.optimizers = optimizers
model.trainer = self
self.__run_pretrain_routine(model)
def ddp_train(self, gpu_nb, model):
"""
Entry point into a DP thread
:param gpu_nb:
:param model:
:param cluster_obj:
:return:
"""
# node rank using relative slurm id
# otherwise default to node rank 0
try:
node_id = os.environ['SLURM_NODEID']
self.node_rank = int(node_id)
except Exception as e:
self.node_rank = 0
# recover original exp before went into process
# init in write mode only on proc 0
self.experiment.debug = self.proc_rank > 0
self.experiment = self.experiment.get_non_ddp_exp()
# show progbar only on prog_rank 0
self.prog_bar = self.prog_bar and self.node_rank == 0 and gpu_nb == 0
# determine which process we are and world size
self.proc_rank = self.node_rank * len(self.data_parallel_device_ids) + gpu_nb
self.world_size = self.nb_gpu_nodes * len(self.data_parallel_device_ids)
# set up server using proc 0's ip address
# try to init for 20 times at max in case ports are taken
# where to store ip_table
self.__init_tcp_connection()
# CHOOSE OPTIMIZER
# filter out the weights that were done on gpu so we can load on good old cpus
self.optimizers = model.configure_optimizers()
# MODEL
# copy model to each gpu
torch.cuda.set_device(gpu_nb)
model.cuda(gpu_nb)
# AMP
# run through amp wrapper before going to distributed DP
if self.use_amp:
# An example
model, optimizers = amp.initialize(
model, self.optimizers, opt_level=self.amp_level,
)
self.optimizers = optimizers
model = LightningDistributedDataParallel(model, device_ids=[gpu_nb])
# continue training routine
self.__run_pretrain_routine(model)
def __init_tcp_connection(self):
"""
Connect all procs in the world using the env:// init
Use the first node as the root address
:param port:
:param tries:
:return:
"""
try:
port = os.environ['MASTER_PORT']
except Exception as e:
port = 12910
os.environ['MASTER_PORT'] = f'{port}'
root_node = self.__resolve_root_node_address()
os.environ['MASTER_ADDR'] = root_node
dist.init_process_group("nccl", rank=self.proc_rank, world_size=self.world_size)
def __resolve_root_node_address(self):
try:
root_node = os.environ['SLURM_NODELIST'].split(' ')[0]
if '[' in root_node:
name = root_node.split('[')[0]
number = root_node.split(',')[0]
if '-' in number:
number = number.split('-')[0]
number = re.sub('[^0-9]', '', number)
root_node = name + number
except Exception as e:
root_node = '127.0.0.2'
return root_node
def __run_pretrain_routine(self, model):
"""
Sanity check a few things before starting actual training
:param model:
:return:
"""
ref_model = model
if self.data_parallel:
ref_model = model.module
ref_model.trainer = self
# set local properties on the model
ref_model.on_gpu = self.on_gpu
# transfer data loaders from model
self.__get_dataloaders(ref_model)
# init training constants
self.__layout_bookeeping()
# add lr schedulers # add lr schedulers
if self.lr_scheduler_milestones is not None: if self.lr_scheduler_milestones is not None:
@@ -275,16 +566,18 @@ class Trainer(TrainerIO):
self.lr_schedulers.append(scheduler) self.lr_schedulers.append(scheduler)
# print model summary # print model summary
model.summarize() if self.proc_rank == 0 and self.print_weights_summary:
ref_model.summarize()
# put on gpu if needed # give model convenience properties
if self.on_gpu: ref_model.trainer = self
model = LightningDataParallel(model, device_ids=self.data_parallel_device_ids) ref_model.experiment = self.experiment
# run tiny validation to make sure program won't crash during val # run tiny validation to make sure program won't crash during val
_ = self.validate(model, self.val_dataloader, max_batches=self.nb_sanity_val_steps) _ = self.validate(model, self.val_dataloader, max_batches=self.nb_sanity_val_steps)
# save exp to get started # save exp to get started
if self.proc_rank == 0:
self.experiment.save() self.experiment.save()
# enable cluster checkpointing # enable cluster checkpointing
@@ -304,12 +597,12 @@ class Trainer(TrainerIO):
for lr_scheduler in self.lr_schedulers: for lr_scheduler in self.lr_schedulers:
lr_scheduler.step() lr_scheduler.step()
model = self.model.module if self.data_parallel else self.model model = self.__get_model()
model.current_epoch = epoch_nb model.current_epoch = epoch_nb
# hook # hook
if self.__is_function_implemented('on_epoch_start'): if self.__is_function_implemented('on_epoch_start'):
model = self.model.module if self.data_parallel else self.model model = self.__get_model()
model.on_epoch_start() model.on_epoch_start()
self.current_epoch = epoch_nb self.current_epoch = epoch_nb
@@ -324,7 +617,7 @@ class Trainer(TrainerIO):
self.batch_nb = batch_nb self.batch_nb = batch_nb
self.global_step += 1 self.global_step += 1
model = self.model.module if self.data_parallel else self.model model = self.__get_model()
model.global_step = self.global_step model.global_step = self.global_step
# stop when the flag is changed or we've gone past the amount requested in the batches # stop when the flag is changed or we've gone past the amount requested in the batches
@@ -348,6 +641,7 @@ class Trainer(TrainerIO):
# when batch should be saved # when batch should be saved
if (batch_nb + 1) % self.log_save_interval == 0 or early_stop_epoch: if (batch_nb + 1) % self.log_save_interval == 0 or early_stop_epoch:
if self.proc_rank == 0:
self.experiment.save() self.experiment.save()
# when metrics should be logged # when metrics should be logged
@@ -355,10 +649,8 @@ class Trainer(TrainerIO):
# count items in memory # count items in memory
# nb_params, nb_tensors = count_mem_items() # nb_params, nb_tensors = count_mem_items()
if self.data_parallel: model = self.__get_model()
metrics = self.model.module.update_tng_log_metrics(self.__tng_tqdm_dic) metrics = model.update_tng_log_metrics(self.__tng_tqdm_dic)
else:
metrics = self.model.update_tng_log_metrics(self.__tng_tqdm_dic)
# add gpu memory # add gpu memory
if self.on_gpu: if self.on_gpu:
@@ -367,19 +659,22 @@ class Trainer(TrainerIO):
# add norms # add norms
if self.track_grad_norm > 0: if self.track_grad_norm > 0:
model = self.model.module if self.data_parallel else self.model model = self.__get_model()
grad_norm_dic = model.grad_norm(self.track_grad_norm) grad_norm_dic = model.grad_norm(self.track_grad_norm)
metrics.update(grad_norm_dic) metrics.update(grad_norm_dic)
if self.__is_function_implemented('on_tng_metrics'):
model.on_tng_metrics(metrics)
# log metrics # log metrics
scalar_metrics = self.__metrics_to_scalars(metrics, blacklist=self.__log_vals_blacklist()) scalar_metrics = self.__metrics_to_scalars(metrics, blacklist=self.__log_vals_blacklist())
if self.proc_rank == 0:
self.experiment.log(scalar_metrics, global_step=self.global_step) self.experiment.log(scalar_metrics, global_step=self.global_step)
self.experiment.save() self.experiment.save()
# hook # hook
if self.__is_function_implemented('on_batch_end'): if self.__is_function_implemented('on_batch_end'):
model = self.model.module if self.data_parallel else self.model model = self.__get_model()
model.on_batch_end() model.on_batch_end()
# end epoch early # end epoch early
@@ -388,13 +683,13 @@ class Trainer(TrainerIO):
# hook # hook
if self.__is_function_implemented('on_epoch_end'): if self.__is_function_implemented('on_epoch_end'):
model = self.model.module if self.data_parallel else self.model model = self.__get_model()
model.on_epoch_end() model.on_epoch_end()
# early stopping # early stopping
if self.enable_early_stop:
should_stop = self.early_stop_callback.on_epoch_end(epoch=epoch_nb, logs=self.__tng_tqdm_dic)
met_min_epochs = epoch_nb > self.min_nb_epochs met_min_epochs = epoch_nb > self.min_nb_epochs
if self.enable_early_stop and met_min_epochs:
should_stop = self.early_stop_callback.on_epoch_end(epoch=epoch_nb, logs=self.__tng_tqdm_dic)
# stop training # stop training
stop = should_stop and met_min_epochs stop = should_stop and met_min_epochs
@@ -417,7 +712,7 @@ class Trainer(TrainerIO):
def __log_vals_blacklist(self): def __log_vals_blacklist(self):
"""avoid logging some vals lightning uses to maintain state""" """avoid logging some vals lightning uses to maintain state"""
blacklist = {'batch_nb', 'v_nb', 'epoch', 'gpu'} blacklist = {'batch_nb', 'v_nb', 'gpu'}
return blacklist return blacklist
def __run_tng_batch(self, data_batch, batch_nb): def __run_tng_batch(self, data_batch, batch_nb):
@@ -426,8 +721,8 @@ class Trainer(TrainerIO):
# hook # hook
if self.__is_function_implemented('on_batch_start'): if self.__is_function_implemented('on_batch_start'):
model = self.model.module if self.data_parallel else self.model model_ref = self.__get_model()
response = model.on_batch_start(data_batch) response = model_ref.on_batch_start(data_batch)
if response == -1: if response == -1:
return -1 return -1
@@ -437,19 +732,32 @@ class Trainer(TrainerIO):
# forward pass # forward pass
# return a scalar value and a dic with tqdm metrics # return a scalar value and a dic with tqdm metrics
if self.data_parallel: if self.use_ddp:
output = self.model(data_batch, batch_nb)
elif self.use_dp:
output = self.model(data_batch, batch_nb) output = self.model(data_batch, batch_nb)
output = reduce_distributed_output(output, len(self.data_parallel_device_ids)) output = reduce_distributed_output(output, len(self.data_parallel_device_ids))
else: else:
output = self.model.training_step(data_batch, batch_nb) output = self.model.training_step(data_batch, batch_nb)
try:
model_specific_tqdm_metrics_dic = output['tqdm_metrics'] model_specific_tqdm_metrics_dic = output['tqdm_metrics']
except Exception as e:
model_specific_tqdm_metrics_dic = {}
# if output dict doesn't have the keyword loss
# then assume the output=loss if scalar
try:
loss = output['loss'] loss = output['loss']
except Exception as e:
if type(output) is torch.Tensor:
loss = output
self.__add_tqdm_metrics(model_specific_tqdm_metrics_dic) self.__add_tqdm_metrics(model_specific_tqdm_metrics_dic)
# backward pass # backward pass
if self.use_amp: if self.use_amp:
# scale loss when using amp
for optimizer in self.optimizers: for optimizer in self.optimizers:
with amp.scale_loss(loss, optimizer) as scaled_loss: with amp.scale_loss(loss, optimizer) as scaled_loss:
scaled_loss.backward() scaled_loss.backward()
@@ -457,10 +765,11 @@ class Trainer(TrainerIO):
loss.backward() loss.backward()
if self.print_nan_grads: if self.print_nan_grads:
model = self.model.module if self.data_parallel else self.model model = self.__get_model()
for param in model.parameters(): for param in model.parameters():
print(param.grad.float().sum()) print(param.grad.float().sum())
# avoid memory leaks
self.batch_loss_value += loss.item() self.batch_loss_value += loss.item()
# gradient update with accumulated gradients # gradient update with accumulated gradients
@@ -468,7 +777,7 @@ class Trainer(TrainerIO):
# clip gradients # clip gradients
if self.gradient_clip > 0: if self.gradient_clip > 0:
model = self.model.module if self.data_parallel else self.model model = self.__get_model()
torch.nn.utils.clip_grad_norm(model.parameters(), self.gradient_clip) torch.nn.utils.clip_grad_norm(model.parameters(), self.gradient_clip)
# update gradients across all optimizers # update gradients across all optimizers
@@ -494,7 +803,8 @@ class Trainer(TrainerIO):
# activate batch end hook # activate batch end hook
if self.__is_function_implemented('on_batch_end'): if self.__is_function_implemented('on_batch_end'):
self.model.on_batch_end() model = self.__get_model()
model.on_batch_end()
return 0 return 0
@@ -509,7 +819,8 @@ class Trainer(TrainerIO):
try: try:
# hook # hook
if self.__is_function_implemented('on_pre_performance_check'): if self.__is_function_implemented('on_pre_performance_check'):
self.model.on_pre_performance_check() model = self.__get_model()
model.on_pre_performance_check()
# use full val set on end of epoch # use full val set on end of epoch
# use a small portion otherwise # use a small portion otherwise
@@ -523,7 +834,8 @@ class Trainer(TrainerIO):
# hook # hook
if self.__is_function_implemented('on_post_performance_check'): if self.__is_function_implemented('on_post_performance_check'):
self.model.on_post_performance_check() model = self.__get_model()
model.on_post_performance_check()
except Exception as e: except Exception as e:
print(e) print(e)
@@ -535,5 +847,6 @@ class Trainer(TrainerIO):
self.prog_bar.set_postfix(**tqdm_metrics) self.prog_bar.set_postfix(**tqdm_metrics)
# model checkpointing # model checkpointing
if self.proc_rank == 0 and self.checkpoint_callback:
print('save callback...') print('save callback...')
self.checkpoint_callback.on_epoch_end(epoch=self.current_epoch, logs=self.__tng_tqdm_dic) self.checkpoint_callback.on_epoch_end(epoch=self.current_epoch, logs=self.__tng_tqdm_dic)
@@ -1,4 +1,7 @@
from torch.nn import DataParallel from torch.nn import DataParallel
from torch.nn.parallel import DistributedDataParallel
import itertools
from itertools import chain
import threading import threading
import torch import torch
@@ -6,6 +9,20 @@ from torch.cuda._utils import _get_device_index
import pdb import pdb
def _find_tensors(obj):
r"""
Recursively find all tensors contained in the specified object.
"""
if isinstance(obj, torch.Tensor):
return [obj]
if isinstance(obj, (list, tuple)):
return itertools.chain(*map(_find_tensors, obj))
if isinstance(obj, dict):
return itertools.chain(*map(_find_tensors, obj.values()))
return []
def get_a_var(obj): def get_a_var(obj):
if isinstance(obj, torch.Tensor): if isinstance(obj, torch.Tensor):
return obj return obj
@@ -26,10 +43,76 @@ class LightningDataParallel(DataParallel):
Override the forward call in lightning so it goes to training and validation step respectively Override the forward call in lightning so it goes to training and validation step respectively
""" """
def forward(self, *inputs, **kwargs):
if not self.device_ids:
return self.module(*inputs, **kwargs)
for t in chain(self.module.parameters(), self.module.buffers()):
if t.device != self.src_device_obj:
raise RuntimeError("module must have its parameters and buffers "
"on device {} (device_ids[0]) but found one of "
"them on device: {}".format(self.src_device_obj, t.device))
inputs, kwargs = self.scatter(inputs, kwargs, self.device_ids)
if len(self.device_ids) == 1:
# lightning
if self.module.training:
return self.module.training_step(*inputs[0], **kwargs[0])
else:
return self.module.validation_step(*inputs[0], **kwargs[0])
replicas = self.replicate(self.module, self.device_ids[:len(inputs)])
outputs = self.parallel_apply(replicas, inputs, kwargs)
return self.gather(outputs, self.output_device)
def parallel_apply(self, replicas, inputs, kwargs): def parallel_apply(self, replicas, inputs, kwargs):
return parallel_apply(replicas, inputs, kwargs, self.device_ids[:len(replicas)]) return parallel_apply(replicas, inputs, kwargs, self.device_ids[:len(replicas)])
class LightningDistributedDataParallel(DistributedDataParallel):
"""
Override the forward call in lightning so it goes to training and validation step respectively
"""
def parallel_apply(self, replicas, inputs, kwargs):
return parallel_apply(replicas, inputs, kwargs, self.device_ids[:len(replicas)])
def forward(self, *inputs, **kwargs):
self._sync_params()
if self.device_ids:
inputs, kwargs = self.scatter(inputs, kwargs, self.device_ids)
if len(self.device_ids) == 1:
# --------------
# LIGHTNING MOD
# --------------
# normal
# output = self.module(*inputs[0], **kwargs[0])
# lightning
if self.module.training:
output = self.module.training_step(*inputs[0], **kwargs[0])
else:
output = self.module.validation_step(*inputs[0], **kwargs[0])
else:
outputs = self.parallel_apply(self._module_copies[:len(inputs)], inputs, kwargs)
output = self.gather(outputs, self.output_device)
else:
output = self.module(*inputs, **kwargs)
if torch.is_grad_enabled():
# We'll return the output object verbatim since it is a freeform
# object. We need to find any tensors in this object, though,
# because we need to figure out which parameters were used during
# this forward pass, to ensure we short circuit reduction for any
# unused parameters. Only if `find_unused_parameters` is set.
if self.find_unused_parameters:
self.reducer.prepare_for_backward(list(_find_tensors(output)))
else:
self.reducer.prepare_for_backward([])
return output
def parallel_apply(modules, inputs, kwargs_tup=None, devices=None): def parallel_apply(modules, inputs, kwargs_tup=None, devices=None):
r"""Applies each `module` in :attr:`modules` in parallel on arguments r"""Applies each `module` in :attr:`modules` in parallel on arguments
contained in :attr:`inputs` (positional) and :attr:`kwargs_tup` (keyword) contained in :attr:`inputs` (positional) and :attr:`kwargs_tup` (keyword)
+3
View File
@@ -19,3 +19,6 @@ class ModelHooks(torch.nn.Module):
def on_post_performance_check(self): def on_post_performance_check(self):
pass pass
def on_tng_metrics(self, metrics):
pass
+26 -2
View File
@@ -2,7 +2,7 @@ import torch
import os import os
import re import re
import pdb import pdb
from pytorch_lightning.pt_overrides.override_data_parallel import LightningDataParallel from pytorch_lightning.pt_overrides.override_data_parallel import LightningDistributedDataParallel, LightningDataParallel
class ModelIO(object): class ModelIO(object):
@@ -21,6 +21,23 @@ class ModelIO(object):
""" """
raise NotImplementedError raise NotImplementedError
# -------------------------
# OPTIONAL HOOKS
# -------------------------
def on_hpc_save(self):
"""
Hook to do whatever you need right before Slurm manager saves the model
:return:
"""
pass
def on_hpc_load(self):
"""
Hook to do whatever you need right before Slurm manager loads the model
:return:
"""
pass
class TrainerIO(object): class TrainerIO(object):
@@ -49,7 +66,8 @@ class TrainerIO(object):
checkpoint['optimizer_states'] = optimizer_states checkpoint['optimizer_states'] = optimizer_states
# request what to save from the model # request what to save from the model
model = self.model.module if type(self.model) is LightningDataParallel else self.model is_dp_module = type(self.model) is LightningDistributedDataParallel or type(self.model) is LightningDataParallel
model = self.model.module if is_dp_module else self.model
checkpoint_dict = model.get_save_dict() checkpoint_dict = model.get_save_dict()
# merge trainer and model saving items # merge trainer and model saving items
@@ -116,6 +134,9 @@ class TrainerIO(object):
os.makedirs(folderpath, exist_ok=True) os.makedirs(folderpath, exist_ok=True)
filepath = '{}/hpc_ckpt_{}.ckpt'.format(folderpath, ckpt_number) filepath = '{}/hpc_ckpt_{}.ckpt'.format(folderpath, ckpt_number)
# give model a chance to do something on hpc_save
self.on_hpc_save()
# request what to save from the model # request what to save from the model
checkpoint_dict = self.dump_checkpoint() checkpoint_dict = self.dump_checkpoint()
@@ -137,6 +158,9 @@ class TrainerIO(object):
model = self.model.module if type(self.model) is LightningDataParallel else self.model model = self.model.module if type(self.model) is LightningDataParallel else self.model
model.load_model_specific(checkpoint) model.load_model_specific(checkpoint)
# call model hook
self.on_hpc_load()
def max_ckpt_in_folder(self, path): def max_ckpt_in_folder(self, path):
files = os.listdir(path) files = os.listdir(path)
files = [x for x in files if 'ckpt_' in x] files = [x for x in files if 'ckpt_' in x]
+2 -18
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@@ -9,7 +9,6 @@ from pytorch_lightning.root_module.optimization import OptimizerConfig
from pytorch_lightning.root_module.hooks import ModelHooks from pytorch_lightning.root_module.hooks import ModelHooks
class LightningModule(GradInformation, ModelIO, OptimizerConfig, ModelHooks): class LightningModule(GradInformation, ModelIO, OptimizerConfig, ModelHooks):
def __init__(self, hparams): def __init__(self, hparams):
@@ -21,29 +20,17 @@ class LightningModule(GradInformation, ModelIO, OptimizerConfig, ModelHooks):
self.current_epoch = 0 self.current_epoch = 0
self.global_step = 0 self.global_step = 0
self.loaded_optimizer_states_dict = {} self.loaded_optimizer_states_dict = {}
self.fast_dev_run = hparams.fast_dev_run
self.overfit = hparams.overfit
self.gradient_clip = hparams.gradient_clip
self.trainer = None self.trainer = None
self.from_lightning = True
self.experiment = None self.experiment = None
# track if gpu was requested for checkpointing # track if gpu was requested for checkpointing
self.on_gpu = False self.on_gpu = False
try:
self.on_gpu = hparams.on_gpu
except Exception as e:
pass
# computed vars for the dataloaders # computed vars for the dataloaders
self._tng_dataloader = None self._tng_dataloader = None
self._val_dataloader = None self._val_dataloader = None
self._test_dataloader = None self._test_dataloader = None
if self.on_gpu:
print('running on gpu...')
torch.set_default_tensor_type(hparams.default_tensor_type)
def forward(self, *args, **kwargs): def forward(self, *args, **kwargs):
""" """
Expand model in into whatever you need. Expand model in into whatever you need.
@@ -91,7 +78,7 @@ class LightningModule(GradInformation, ModelIO, OptimizerConfig, ModelHooks):
:param logs: :param logs:
:return: :return:
""" """
raise NotImplementedError return logs
def loss(self, *args, **kwargs): def loss(self, *args, **kwargs):
""" """
@@ -105,9 +92,6 @@ class LightningModule(GradInformation, ModelIO, OptimizerConfig, ModelHooks):
model_summary = ModelSummary(self) model_summary = ModelSummary(self)
print(model_summary) print(model_summary)
def nb_batches(self, dataloader):
a = math.ceil(float(len(dataloader.dataset) / self.batch_size))
return int(a)
def freeze(self): def freeze(self):
for param in self.parameters(): for param in self.parameters():
@@ -145,7 +129,7 @@ class LightningModule(GradInformation, ModelIO, OptimizerConfig, ModelHooks):
def get_process_position(gpus): def get_process_position(gpus):
try: try:
current_gpu = os.environ["CUDA_VISIBLE_DEVICES"] current_gpu = os.environ["CUDA_VISIBLE_DEVICES"]
gpu_ids = gpus.split(';') gpu_ids = gpus.split(',')
process_position = gpu_ids.index(current_gpu) process_position = gpu_ids.index(current_gpu)
return process_position, current_gpu return process_position, current_gpu
except Exception as e: except Exception as e:
+2 -2
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@@ -39,8 +39,8 @@ def add_default_args(parser, root_dir, rand_seed=None, possible_model_names=None
parser.add_argument('--model_name', default='', help=','.join(possible_model_names)) parser.add_argument('--model_name', default='', help=','.join(possible_model_names))
# test_tube settings # test_tube settings
parser.add_argument('-en', '--tt_name', default='r_lib_') parser.add_argument('-en', '--tt_name', default='pt_test')
parser.add_argument('-td', '--tt_description', default='test research lib') parser.add_argument('-td', '--tt_description', default='pytorch lightning test')
parser.add_argument('--tt_save_path', default=root_dir + '/test_tube_logs', help='logging dir') parser.add_argument('--tt_save_path', default=root_dir + '/test_tube_logs', help='logging dir')
parser.add_argument('--enable_single_run', dest='single_run', action='store_true') parser.add_argument('--enable_single_run', dest='single_run', action='store_true')
parser.add_argument('--nb_hopt_trials', default=1, type=int) parser.add_argument('--nb_hopt_trials', default=1, type=int)
+1 -1
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@@ -1,4 +1,3 @@
from matplotlib import pyplot as plt
import numpy as np import numpy as np
np.seterr(divide='ignore', invalid='ignore') np.seterr(divide='ignore', invalid='ignore')
@@ -13,6 +12,7 @@ def plot_confusion_matrix(cm,
This function prints and plots the confusion matrix. This function prints and plots the confusion matrix.
Normalization can be applied by setting `normalize=True`. Normalization can be applied by setting `normalize=True`.
""" """
from matplotlib import pyplot as plt
if normalize: if normalize:
cm = cm.astype('float') / cm.sum(axis=1)[:, np.newaxis] cm = cm.astype('float') / cm.sum(axis=1)[:, np.newaxis]
print("Normalized confusion matrix") print("Normalized confusion matrix")
+2 -3
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@@ -7,7 +7,7 @@ from setuptools import setup, find_packages
# http://blog.ionelmc.ro/2014/05/25/python-packaging/ # http://blog.ionelmc.ro/2014/05/25/python-packaging/
setup( setup(
name="pytorch-lightning", name="pytorch-lightning",
version='0.12', version='0.3',
description="The Keras for ML researchers using PyTorch", description="The Keras for ML researchers using PyTorch",
author="William Falcon", author="William Falcon",
author_email="waf2107@columbia.edu", author_email="waf2107@columbia.edu",
@@ -19,8 +19,7 @@ setup(
install_requires=[ install_requires=[
"torch>=1.1.0", "torch>=1.1.0",
"tqdm", "tqdm",
"test-tube>=0.65", "test-tube>=0.6.7.1",
"tensorflow>=1.14.0"
], ],
packages=find_packages(), packages=find_packages(),
long_description=open("README.md", encoding="utf-8").read(), long_description=open("README.md", encoding="utf-8").read(),