Compare commits

..
2 Commits
Author SHA1 Message Date
William Falcon 60384eb61e release v0.4.8 2019-08-31 03:05:57 -04:00
William Falcon f51b45933b Expectopatronum implement #89 (#182)
* rename validate -> evaluate; implement test logic; allow multiple test_loaders

* add test_step and test_end to LightningModule

* add in_test_mode to pretraining to implement case 2 (test pretrained model)

* fix code style issues

* LightningTestModel: add optional second test set, implement test_step and test_end

* implemented test for multiple test_dataloaders; fixed typo

* add two test cases for #89

* add documentation for test_step, test_end; fix computation of loss in validation_step example

* Update trainer.py

* Update trainer.py

* Update trainer.py

* Update trainer.py

* Update trainer.py

* Update trainer.py

* Added proper dp ddp routing calls for test mode

* Update trainer.py

* Update test_models.py

* Update trainer.py

* Update trainer.py

* Update override_data_parallel.py

* Update test_models.py

* Update test_models.py

* Update trainer.py

* Update trainer.py

* Update trainer.py

* Update test_models.py

* Update test_models.py

* debug

* debug

* debug

* debug

* debug

* debug

* debug

* debug

* debug

* debug

* debug

* debug

* debug

* debug

* debug

* debug

* debug

* debug

* debug

* debug

* debug

* debug

* debug

* debug

* debug

* debug

* debug

* debug

* debug

* debug

* debug

* debug

* debug

* debug

* debug

* debug

* debug

* debug

* debug

* debug

* debug

* debug

* debug

* debug

* debug

* debug

* debug

* debug

* debug

* debug

* debug

* debug

* debug

* debug

* debug

* debug

* debug

* debug

* debug

* debug

* debug

* debug

* debug

* debug

* debug

* debug

* debug

* debug

* debug

* debug

* debug

* debug

* debug

* debug

* debug

* debug

* debug

* debug

* debug

* debug

* debug

* debug

* debug

* debug

* debug

* debug

* debug

* debug

* debug

* debug

* debug

* Update trainer.py

* Update override_data_parallel.py

* Update debug.py

* Update lm_test_module.py

* Update test_models.py
2019-08-30 18:56:09 -04:00
151 changed files with 7057 additions and 12498 deletions
-116
View File
@@ -1,116 +0,0 @@
# Python CircleCI 2.0 configuration file
#
# Check https://circleci.com/docs/2.0/language-python/ for more details
#
version: 2.0
references:
install_deps: &install_deps
run:
name: Install Dependences
command: |
pip install "$TORCH_VERSION" --user
# this is temporal fix til test-tube is not merged and released
pip install -r requirements.txt --user
sudo pip install pytest pytest-cov pytest-flake8
pip install -r ./tests/requirements.txt --user
tests: &tests
run:
name: Testing
command: |
python --version ; pip --version ; pip list
py.test pytorch_lightning tests pl_examples -v --doctest-modules --junitxml=test-reports/pytest_junit.xml
no_output_timeout: 15m
format: &format
run:
name: Formatting
command: |
python --version ; pip --version ; pip list
flake8
make_docs: &make_docs
run:
name: Make Documentation
command: |
# sudo apt-get install pandoc
pip install -r requirements.txt --user
sudo pip install -r docs/requirements.txt
# sphinx-apidoc -o ./docs/source ./pytorch_lightning **/test_* --force --follow-links
cd docs; make clean ; make html
jobs:
Build-Docs:
docker:
- image: circleci/python:3.7
steps:
- checkout
- *make_docs
Formatting:
docker:
- image: circleci/python:3.7
environment:
- TORCH_VERSION: "torch"
steps:
- checkout
- *install_deps
- *format
PyTorch:
docker:
- image: circleci/python:3.7
environment:
- TORCH_VERSION: "torch"
steps: &steps
- checkout
- *install_deps
- *tests
- store_test_results:
path: test-reports
- store_artifacts:
path: test-reports
PyTorch-v1.1:
docker:
- image: circleci/python:3.6
environment:
- TORCH_VERSION: "torch>=1.1, <1.2"
steps: *steps
PyTorch-v1.2:
docker:
- image: circleci/python:3.6
environment:
- TORCH_VERSION: "torch>=1.2, <1.3"
steps: *steps
PyTorch-v1.3:
docker:
- image: circleci/python:3.6
environment:
- TORCH_VERSION: "torch>=1.3, <1.4"
steps: *steps
PyTorch-v1.4:
docker:
- image: circleci/python:3.6
environment:
- TORCH_VERSION: "torch>=1.4, <1.5"
steps: *steps
workflows:
version: 2
build:
jobs:
- Formatting
- Build-Docs
- PyTorch-v1.1
- PyTorch-v1.2
- PyTorch-v1.3
- PyTorch-v1.4
-59
View File
@@ -1,59 +0,0 @@
# How to become a core contributor
Thanks for your interest in joining the Lightning team! Were a rapidly growing project which is poised to become the go-to framework for DL researchers!
We're currently recruiting for a team of 5 core maintainers.
As a core maintainer you will have a strong say in the direction of the project. Big changes will require a majority of maintainers to agree.
### Code of conduct
First and foremost, you'll be evaluated against [these core values](https://github.com/PyTorchLightning/pytorch-lightning/blob/master/.github/CONTRIBUTING.md). Any code we commit or feature we add needs to align with those core values.
### The bar for joining the team
Lightning is being used to solve really hard problems at the top AI labs in the world. As such, the bar for adding team members is extremely high. Candidates must have solid engineering skills, have a good eye for user experience, and must be a power user of Lightning and PyTorch.
With that said, the Lightning team will be diverse and a reflection of an inclusive AI community. You don't have to be an engineer to conntribute! Scientists with great usability intuition and PyTorch ninja skills are welcomed!
### Responsibilities:
The responsibilities mainly revolve around 3 things.
#### Github issues
- Here we want to help users have an amazing experience. These range from questions from new people getting into DL to questions from researchers about doing something esoteric with Lightning
Often, these issues require some sort of bug fix, document clarification or new functionality to be scoped out.
- To become a core member you must resolve at least 10 Github issues which align with the API design goals for Lightning. By the end of these 10 issues I should feel comfortable in the way you answer user questions
Pleasant/helpful tone.
- Can abstract from that issue or bug into functionality that might solve other related issues or makes the platform more flexible.
- Dont make users feel like they dont know what theyre doing. Were here to help and to make everyones experience delightful.
#### Pull requests
- Here we need to ensure the code that enters Lightning is high quality. For each PR we need to:
- Make sure code coverage does not decrease
- Documents are updated
- Code is elegant and simple
- Code is NOT overly engineered or hard to read
- Ask yourself, could a non-engineer understand whats happening here?
- Make sure new tests are written
- Is this NECESSARY for Lightning? There are some PRs which are just purely about adding engineering complexity which have no place in Lightning.
Guidance
- Some other PRs are for people who are wanting to get involved and add something unnecessary. We do want their help though! So dont approve the PR, but direct them to a Github issue that they might be interested in helping with instead!
- To be considered for core contributor, please review 10 PRs and help the authors land it on master. Once you've finished the review, ping me
for a sanity check. At the end of 10 PRs if your PR reviews are inline with expectations described above, then you can merge PRs on your own going forward,
otherwise we'll do a few more until we're both comfortable :)
#### Project directions
There are some big decisions which the project must make. For these I expect core contributors to have something meaningful to add if its their area of expertise.
#### Diversity
Lightning should reflect the broader community it serves. As such we should have scientists/researchers from
different fields contributing!
The first 5 core contributors will fit this profile. Thus if you overlap strongly with experiences and expertise as someone else on the team, you might have to wait until the next set of contributors are added.
#### Summary: Requirements to apply
- Solve 10 Github issues. The goal is to be inline with expectations for solving issues by the last one so you can do them on your own. If not, I might ask you to solve a few more specific ones.
- Do 10 PR reviews. The goal is to be inline with expectations for solving issues by the last one so you can do them on your own. If not, I might ask you to solve a few more specific ones.
If you want to be considered, ping me on gitter and start [tracking your progress here](https://docs.google.com/spreadsheets/d/15D58gp8DvI0Z6qbbYVRuaWioiwzafcP58-UlbuO_CMU/edit?usp=sharing).
+7 -18
View File
@@ -1,14 +1,15 @@
# Contributing # Contributing
Welcome to the PyTorch Lightning community! We're building the most advanced research platform on the planet to implement the latest, best practices that the amazing PyTorch team rolls out! Welcome to the PyTorch Lightning community! We're building the most advanced research platform on the planet to implement the latest, best practices that the amazing PyTorch team rolls out!
## Main Core Value: One less thing to remember ## One less thing to remember
Simplify the API as much as possible from the user perspective. Any additions or improvements should minimize things the user needs to remember. Simplify the API as much as possible from the user perspective. Any additions or improvements should minimize things the user needs to remember.
For example: One benefit of the validation_step is that the user doesn't have to remember to set the model to .eval(). This avoids all sorts of subtle errors the user could make. For example: One benefit of the validation_step is that the user doesn't have to remember to set the model to .eval(). This avoids all sorts of subtle errors the user could make.
## Lightning Design Principles ## Lightning Design Principles
We encourage all sorts of contributions you're interested in adding! When coding for lightning, please follow these principles. We encourage all sorts of contributions you're interested in adding! When coding for lightning, please follow these principles.
#### No PyTorch Interference
#### No PyTorch interference
We don't want to add any abstractions on top of pure PyTorch. This gives researchers all the control they need without having to learn yet another framework. We don't want to add any abstractions on top of pure PyTorch. This gives researchers all the control they need without having to learn yet another framework.
#### Simple Internal Code #### Simple Internal Code
@@ -20,25 +21,17 @@ There are 1,000 ways to do something. However, something eventually becomes stan
When something becomes a best practice, we add it to the framework. This likely looks like code in utils or in the model file that everyone keeps adding over and over again across projects. When this happens, bring that code inside the trainer and add a flag for it. When something becomes a best practice, we add it to the framework. This likely looks like code in utils or in the model file that everyone keeps adding over and over again across projects. When this happens, bring that code inside the trainer and add a flag for it.
#### Simple External API #### Simple External API
What makes sense to you may not make sense to others. Create an issue with an API change suggestion and validate that it makes sense for others. Treat code changes how you treat a startup: validate that it's a needed feature, then add if it makes sense for many people. What makes sense to you may not make sense to others. Create an issue with an API change suggestion and validate that it makes sense for others. Treat code changes how you treat a startup: validate that it's a needed feature, then add if it makes sense for many people.
#### Backward-compatible API
We all hate updating our deep learning packages because we don't want to refactor a bunch of stuff. In Lightning, we make sure every change we make which could break an API is backwards compatible with good deprecation warnings.
You shouldn't be afraid to upgrade Lightning :)
#### Gain User Trust #### Gain User Trust
As a researcher you can't have any part of your code going wrong. So, make thorough tests that ensure an implementation of a new trick or subbtle change is correct. As a researcher you can't have any part of your code going wrong. So, make thorough tests that ensure an implementation of a new trick or subbtle change is correct.
#### Interoperability ## Contribution types
Have a favorite feature from other libraries like fast.ai or transformers? Those should just work with lightning as well. Grab your favorite model or learning rate scheduler from your favorite library and run it in Lightning.
## Contribution Types
Currently looking for help implementing new features or adding bug fixes. Currently looking for help implementing new features or adding bug fixes.
A lot of good work has already been done in project mechanics (requirements.txt, setup.py, pep8, badges, ci, etc...) we're in a good state there thanks to all the early contributors (even pre-beta release)! A lot of good work has already been done in project mechanics (requirements.txt, setup.py, pep8, badges, ci, etc...) we're in a good state there thanks to all the early contributors (even pre-beta release)!
## Bug Fixes: ## Bug fixes:
1. Submit a github issue. 1. Submit a github issue.
2. Fix it. 2. Fix it.
3. Submit a PR! 3. Submit a PR!
@@ -47,7 +40,3 @@ A lot of good work has already been done in project mechanics (requirements.txt,
1. Submit a github issue. 1. Submit a github issue.
2. We'll agree on the feature scope. 2. We'll agree on the feature scope.
3. Submit a PR! (with updated docs and tests 🙃). 3. Submit a PR! (with updated docs and tests 🙃).
## Coding Styleguide
1. Test the code with flake8.
2. Use f-strings.
+16 -42
View File
@@ -8,55 +8,29 @@ assignees: ''
--- ---
### Common bugs: ### Common bugs:
1. Tensorboard not showing in Jupyter-notebook see [issue 79](https://github.com/PyTorchLightning/pytorch-lightning/issues/79). 1. Tensorboard not showing in Jupyter-notebook see [issue 79](https://github.com/williamFalcon/pytorch-lightning/issues/79).
2. PyTorch 1.1.0 vs 1.2.0 support [see FAQ](https://github.com/PyTorchLightning/pytorch-lightning#faq) 2. PyTorch 1.1.0 vs 1.2.0 support [see FAQ](https://github.com/williamFalcon/pytorch-lightning#faq)
## 🐛 Bug **Describe the bug**
A clear and concise description of what the bug is.
<!-- A clear and concise description of what the bug is. -->
### To Reproduce
**To Reproduce**
Steps to reproduce the behavior: Steps to reproduce the behavior:
1. Go to '...' 1. Go to '...'
2. Run '....' 2. Click on '....'
3. Scroll down to '....' 3. Scroll down to '....'
4. See error 4. See error
<!-- If you have a code sample, error messages, stack traces, please provide it here as well --> **Expected behavior**
A clear and concise description of what you expected to happen.
**Screenshots**
If applicable, add screenshots to help explain your problem.
#### Code sample **Desktop (please complete the following information):**
<!-- Ideally attach a minimal code sample to reproduce the decried issue. - OS: [e.g. iOS]
Minimal means having the shortest code but still preserving the bug. --> - Browser [e.g. chrome, safari]
- Version [e.g. 22]
### Expected behavior **Additional context**
Add any other context about the problem here.
<!-- A clear and concise description of what you expected to happen. -->
### Environment
Please copy and paste the output from our
[environment collection script](https://raw.githubusercontent.com/pytorch/pytorch/master/torch/utils/collect_env.py)
(or fill out the checklist below manually).
You can get the script and run it with:
```
wget https://raw.githubusercontent.com/pytorch/pytorch/master/torch/utils/collect_env.py
# For security purposes, please check the contents of collect_env.py before running it.
python collect_env.py
```
- PyTorch Version (e.g., 1.0):
- OS (e.g., Linux):
- How you installed PyTorch (`conda`, `pip`, source):
- Build command you used (if compiling from source):
- Python version:
- CUDA/cuDNN version:
- GPU models and configuration:
- Any other relevant information:
### Additional context
<!-- Add any other context about the problem here. -->
+8 -15
View File
@@ -7,21 +7,14 @@ assignees: ''
--- ---
## 🚀 Feature **Is your feature request related to a problem? Please describe.**
<!-- A clear and concise description of the feature proposal --> A clear and concise description of what the problem is. Ex. I'm always frustrated when [...]
### Motivation **Describe the solution you'd like**
A clear and concise description of what you want to happen.
<!-- Please outline the motivation for the proposal. Is your feature request related to a problem? e.g., I'm always frustrated when [...]. If this is related to another GitHub issue, please link here too --> **Describe alternatives you've considered**
A clear and concise description of any alternative solutions or features you've considered.
### Pitch **Additional context**
Add any other context or screenshots about the feature request here.
<!-- A clear and concise description of what you want to happen. -->
### Alternatives
<!-- A clear and concise description of any alternative solutions or features you've considered, if any. -->
### Additional context
<!-- Add any other context or screenshots about the feature request here. -->
+10 -14
View File
@@ -7,24 +7,20 @@ assignees: ''
--- ---
## ❓ Questions and Help
### Before asking: ### Before asking:
1. search the issues. 1. search the issues.
2. search the docs. 2. search the docs.
<!-- If you still can't find what you need: --> If you still can't find what you need:
#### What is your question?
#### What is your question? #### Code
Please paste a code snippet if your question requires it!
#### Code #### What have you tried?
<!-- Please paste a code snippet if your question requires it! --> #### What's your environment?
- conda version (no venv)
#### What have you tried? - PyTorch version
- Lightning version
#### What's your environment? - Test-tube version
- OS: [e.g. iOS, Linux, Win]
- Packaging [e.g. pip, conda]
- Version [e.g. 0.5.2.1]
@@ -7,12 +7,11 @@ assignees: ''
--- ---
## 📚 Documentation
For typos and doc fixes, please go ahead and: For typos and doc fixes, please go ahead and:
1. Create an issue. 1. Create an issue.
2. Fix the typo. 2. Fix the typo.
3. Submit a PR. 3. Submit a PR.
Thanks! Thanks!
-16
View File
@@ -1,16 +0,0 @@
# Before submitting
- [ ] Was this discussed/approved via a Github issue? (no need for typos, doc improvements)
- [ ] Did you read the [contributor guideline](https://github.com/PyTorchLightning/pytorch-lightning/blob/master/.github/CONTRIBUTING.md)?
- [ ] Did you make sure to update the docs?
- [ ] Did you write any new necessary tests?
## What does this PR do?
Fixes # (issue).
## PR review
Anyone in the community is free to review the PR once the tests have passed.
If we didn't discuss your PR in Github issues there's a high chance it will not be merged.
## Did you have fun?
Make sure you had fun coding 🙃
+12 -20
View File
@@ -1,29 +1,25 @@
# project # project
.DS_Store .DS_Store
.data/
run_configs/ run_configs/
test_tube_logs/
test_tube_data/
datasets/
model_weights/ model_weights/
app/models/ app/models/
pip-wheel-metadata/ pip-wheel-metadata/
lightning_logs/
# Test-tube
test_tube_logs/
test_tube_data/
test_tube_exp/ test_tube_exp/
tests/tests_tt_dir/
# Documentations tests/save_dir
docs/source/pl_examples*.rst default/
docs/source/pytorch_lightning*.rst
tests/tests/
/docs/source/*.md
# Byte-compiled / optimized / DLL files # Byte-compiled / optimized / DLL files
__pycache__/ __pycache__/
*.py[cod] *.py[cod]
*$py.class *$py.class
example.py
timit_data/ timit_data/
LJSpeech-1.1/
# C extensions # C extensions
*.so *.so
@@ -32,6 +28,7 @@ timit_data/
# Distribution / packaging # Distribution / packaging
.Python .Python
env/
ide_layouts/ ide_layouts/
build/ build/
develop-eggs/ develop-eggs/
@@ -43,6 +40,7 @@ lib/
lib64/ lib64/
parts/ parts/
sdist/ sdist/
var/
wheels/ wheels/
*.egg-info/ *.egg-info/
.installed.cfg .installed.cfg
@@ -68,9 +66,6 @@ nosetests.xml
coverage.xml coverage.xml
*.cover *.cover
.hypothesis/ .hypothesis/
tests/tests_tt_dir/
tests/save_dir
tests/tests/
# Translations # Translations
*.mo *.mo
@@ -88,7 +83,7 @@ instance/
.scrapy .scrapy
# Sphinx documentation # Sphinx documentation
docs/build/ docs/_build/
# PyBuilder # PyBuilder
target/ target/
@@ -110,7 +105,6 @@ celerybeat-schedule
# virtualenv # virtualenv
.venv .venv
env/
venv/ venv/
ENV/ ENV/
@@ -128,6 +122,4 @@ ENV/
.mypy_cache/ .mypy_cache/
# data # data
.data/
datasets/
mnist/ mnist/
+3 -8
View File
@@ -5,13 +5,9 @@
# Required # Required
version: 2 version: 2
# Build documentation in the docs/ directory with Sphinx
sphinx:
configuration: docs/source/conf.py
# Build documentation with MkDocs # Build documentation with MkDocs
#mkdocs: mkdocs:
# configuration: mkdocs.yml configuration: mkdocs.yml
# Optionally build your docs in additional formats such as PDF and ePub # Optionally build your docs in additional formats such as PDF and ePub
formats: all formats: all
@@ -20,5 +16,4 @@ formats: all
python: python:
version: 3.7 version: 3.7
install: install:
- requirements: docs/requirements.txt - requirements: docs/requirements.txt
#- requirements: requirements.txt
-10
View File
@@ -1,10 +0,0 @@
# use this to run tests
rm -rf _ckpt_*
rm -rf tests/save_dir*
rm -rf tests/mlruns_*
rm -rf tests/cometruns*
rm -rf tests/wandb*
rm -rf tests/tests/*
rm -rf lightning_logs
coverage run --source pytorch_lightning -m py.test pytorch_lightning tests pl_examples -v --doctest-modules
coverage report -m
+8 -52
View File
@@ -8,6 +8,8 @@
# this file is *not* meant to cover or endorse the use of travis, but rather to # this file is *not* meant to cover or endorse the use of travis, but rather to
# help confirm pull requests to this project. # help confirm pull requests to this project.
dist: xenial # Ubuntu 16.04
env: env:
global: global:
- DISPLAY="" - DISPLAY=""
@@ -16,69 +18,23 @@ language: python
matrix: matrix:
include: include:
- dist: xenial # Ubuntu 16.04 - python: 3.6
python: 3.6
env:
- TOXENV=py36
- MIN_REQUIREMENTS=1
- dist: xenial # Ubuntu 16.04
python: 3.7
env:
- TOXENV=py37
- MIN_REQUIREMENTS=1
- dist: bionic # Ubuntu 18.04
python: 3.6
env: TOXENV=py36 env: TOXENV=py36
- dist: bionic # Ubuntu 18.04 - python: 3.7
python: 3.7
env: TOXENV=py37 env: TOXENV=py37
- os: osx
# https://blog.travis-ci.com/2019-08-07-extensive-python-testing-on-travis-ci
osx_image: xcode10.3
language: generic
env: TOXENV=py37
#addons:
# homebrew:
# # update: true
# packages: python3.7
before_install:
- pip3 install virtualenv
- virtualenv -p python3 ~/venv
- source ~/venv/bin/activate
# - os: windows
# language: minimal
# before_install:
# - choco install python3
# - export PATH="/c/Python37:/c/Python37/Scripts:$PATH"
# env: TOXENV=py37
# See http://docs.travis-ci.com/user/caching/#pip-cache # See http://docs.travis-ci.com/user/caching/#pip-cache
cache: pip cache: pip
install: install:
- pip install future # needed for `builtins` - pip install -r requirements.txt
- sudo pip install tox - pip install -r ./tests/requirements.txt
- pip --version ; pip list
before_script:
# rewrite all minimal requirements as strict
- if [[ "${MIN_REQUIREMENTS}" == "1" ]]; then
python -c "req = open('requirements.txt').read().replace('>', '=') ; open('requirements-ci.txt', 'w').write(req)" ;
else
cp requirements.txt requirements-ci.txt ;
fi
- pip install -r requirements-ci.txt -U
script: script:
# integration # integration
- tox --sitepackages - tox --sitepackages
- python setup.py install --dry-run
#- python setup.py install --dry-run --user
- virtualenv vEnv ;
source vEnv/bin/activate
- pip install --editable . ;
cd .. & python -c "import pytorch_lightning ; print(pytorch_lightning.__version__)"
- deactivate ;
rm -rf vEnv
after_success: after_success:
- coverage report - coverage report
+2 -7
View File
@@ -1,6 +1,7 @@
# Manifest syntax https://docs.python.org/2/distutils/sourcedist.html # Manifest syntax https://docs.python.org/2/distutils/sourcedist.html
graft wheelhouse graft wheelhouse
recursive-include birl *.py
recursive-exclude __pycache__ *.py[cod] *.orig recursive-exclude __pycache__ *.py[cod] *.orig
# Include the README # Include the README
@@ -12,16 +13,11 @@ include LICENSE
exclude *.sh exclude *.sh
exclude *.toml exclude *.toml
exclude *.svg exclude *.svg
recursive-include examples *.py
recursive-include pytorch_lightning *.py recursive-include pytorch_lightning *.py
# include examples
recursive-include pl_examples *.py
recursive-include pl_examples *.md
recursive-include pl_examples *.sh
# exclude tests from package # exclude tests from package
recursive-exclude tests * recursive-exclude tests *
recursive-exclude site *
exclude tests exclude tests
# Exclude the documentation files # Exclude the documentation files
@@ -36,7 +32,6 @@ exclude *.yml
prune .git prune .git
prune .github prune .github
prune .circleci
prune notebook* prune notebook*
prune temp* prune temp*
prune test* prune test*
+253 -227
View File
@@ -1,24 +1,22 @@
<div align="center"> <div align="center">
![Logo](docs/source/_static/images/lightning_logo_small.png) ![Logo](./docs/source/_static/lightning_logo_small.png)
# PyTorch Lightning # PyTorch Lightning
**The lightweight PyTorch wrapper for ML researchers. Scale your models. Write less boilerplate.** **The PyTorch Keras for ML researchers. More control. Less boilerplate.**
[![PyPI Status](https://badge.fury.io/py/pytorch-lightning.svg)](https://badge.fury.io/py/pytorch-lightning) [![PyPI Status](https://badge.fury.io/py/pytorch-lightning.svg)](https://badge.fury.io/py/pytorch-lightning)
[![PyPI Status](https://pepy.tech/badge/pytorch-lightning)](https://pepy.tech/project/pytorch-lightning) [![PyPI Status](https://pepy.tech/badge/pytorch-lightning)](https://pepy.tech/project/pytorch-lightning)
[![Build Status](https://travis-ci.org/PytorchLightning/pytorch-lightning.svg?branch=master)](https://travis-ci.org/PytorchLightning/pytorch-lightning) [![Build Status](https://travis-ci.org/williamFalcon/pytorch-lightning.svg?branch=master)](https://travis-ci.org/williamFalcon/pytorch-lightning)
[![Build status](https://ci.appveyor.com/api/projects/status/NEW-PROJECT-ID?svg=true)](https://ci.appveyor.com/project/PytorchLightning/pytorch-lightning) [![Build status](https://ci.appveyor.com/api/projects/status/rum89d7hq8l1kfye?svg=true)](https://ci.appveyor.com/project/Borda/pytorch-lightning)
[![Coverage](docs/source/_static/images/coverage.svg)](https://github.com/PytorchLightning/pytorch-lightning/tree/master/tests#running-coverage) [![Coverage](https://github.com/williamFalcon/pytorch-lightning/blob/master/docs/source/_static/coverage.svg)](https://github.com/williamFalcon/pytorch-lightning/tree/master/tests#running-coverage)
[![CodeFactor](https://www.codefactor.io/repository/github/borda/pytorch-lightning/badge)](https://www.codefactor.io/repository/github/borda/pytorch-lightning) [![CodeFactor](https://www.codefactor.io/repository/github/borda/pytorch-lightning/badge)](https://www.codefactor.io/repository/github/borda/pytorch-lightning)
[![ReadTheDocs](https://readthedocs.org/projects/pytorch-lightning/badge/?version=latest)](https://pytorch-lightning.readthedocs.io/en/latest) [![ReadTheDocs](https://readthedocs.org/projects/pytorch-lightning/badge/?version=latest)](https://pytorch-lightning.readthedocs.io/en/latest)
[![Slack](https://img.shields.io/badge/slack-chat-green.svg?logo=slack)](https://join.slack.com/t/pytorch-lightning/shared_invite/enQtODU5ODIyNTUzODQwLTFkMDg5Mzc1MDBmNjEzMDgxOTVmYTdhYjA1MDdmODUyOTg2OGQ1ZWZkYTQzODhhNzdhZDA3YmNhMDhlMDY4YzQ) [![Gitter](https://badges.gitter.im/PyTorch-Lightning/community.svg)](https://gitter.im/PyTorch-Lightning/community?utm_source=badge&utm_medium=badge&utm_campaign=pr-badge)
[![license](https://img.shields.io/badge/License-Apache%202.0-blue.svg)](https://github.com/PytorchLightning/pytorch-lightning/blob/master/LICENSE) [![license](https://img.shields.io/badge/License-Apache%202.0-blue.svg)](https://github.com/williamFalcon/pytorch-lightning/blob/master/LICENSE)
[![Next Release](https://img.shields.io/badge/Next%20Release-Feb%206-<COLOR>.svg)](https://shields.io/)
<!-- <!--
removed until codecov badge isn't empy. likely a config error showing nothing on master. removed until codecov badge isn't empy. likely a config error showing nothing on master.
[![codecov](https://codecov.io/gh/Borda/pytorch-lightning/branch/master/graph/badge.svg)](https://codecov.io/gh/Borda/pytorch-lightning) [![codecov](https://codecov.io/gh/Borda/pytorch-lightning/branch/master/graph/badge.svg)](https://codecov.io/gh/Borda/pytorch-lightning)
@@ -32,189 +30,164 @@ pip install pytorch-lightning
``` ```
## Docs ## Docs
[jan 20, 2020] **[View the docs here](https://williamfalcon.github.io/pytorch-lightning/)**
**[Old docs (some links might be broken)](https://pytorch-lightning.readthedocs.io/en/stable)
###### As a temporary hack, when you get the 404, replace williamfalcon.github.io with pytorchlightning.github.io.
**[New docs, CURRENTLY DEBUGING](https://pytorch-lightning.rtfd.io/en/latest)**
## Demo
[Copy and run this COLAB!](https://colab.research.google.com/drive/1F_RNcHzTfFuQf-LeKvSlud6x7jXYkG31#scrollTo=HOk9c4_35FKg)
## What is it? ## What is it?
Lightning is a very lightweight wrapper on PyTorch that decouples the science code from the engineering code. It's more of a style-guide than a framework. By refactoring your code, we can automate most of the non-research code. Lightning is a very lightweight wrapper on PyTorch. This means you don't have to learn a new library. To use Lightning, simply refactor your research code into the [LightningModule](https://github.com/williamFalcon/pytorch-lightning#how-do-i-do-use-it) format and Lightning will automate the rest. Lightning guarantees tested, correct, modern best practices for the automated parts.
To use Lightning, simply refactor your research code into the [LightningModule](https://github.com/PytorchLightning/pytorch-lightning#how-do-i-do-use-it) format (the science) and Lightning will automate the rest (the engineering). Lightning guarantees tested, correct, modern best practices for the automated parts.
- If you are a researcher, Lightning is infinitely flexible, you can modify everything down to the way .backward is called or distributed is set up.
- If you are a scientist or production team, lightning is very simple to use with best practice defaults.
## What does lightning control for me?
Everything in Blue!
This is how lightning separates the science (red) from the engineering (blue).
![Overview](docs/source/_static/images/pl.gif)
## How much effort is it to convert?
You're probably tired of switching frameworks at this point. But it is a very quick process to refactor into the Lightning format (ie: hours). [Check out this tutorial](https://towardsdatascience.com/how-to-refactor-your-pytorch-code-to-get-these-42-benefits-of-pytorch-lighting-6fdd0dc97538)
## Starting a new project? ## Starting a new project?
[Use our seed-project aimed at reproducibility!](https://github.com/PytorchLightning/pytorch-lightning-conference-seed) [Use our seed-project aimed at reproducibility!](https://github.com/williamFalcon/pytorch-lightning-conference-seed)
## Why do I want to use lightning? ## Why do I want to use lightning?
Every research project starts the same, a model, a training loop, validation loop, etc. As your research advances, you're likely to need distributed training, 16-bit precision, checkpointing, gradient accumulation, etc. Every research project starts the same, a model, a training loop, validation loop, etc. As your research advances, you're likely to need distributed training, 16-bit precision, checkpointing, gradient accumulation, etc.
Lightning sets up all the boilerplate state-of-the-art training for you so you can focus on the research. Lightning sets up all the boilerplate state-of-the-art training for you so you can focus on the research.
--- ---
## README Table of Contents ## README Table of Contents
- [How do I use it](https://github.com/PytorchLightning/pytorch-lightning#how-do-i-do-use-it) - [How do I use it](https://github.com/williamFalcon/pytorch-lightning#how-do-i-do-use-it)
- [What lightning automates](https://github.com/PytorchLightning/pytorch-lightning#what-does-lightning-control-for-me) - [What lightning automates](https://github.com/williamFalcon/pytorch-lightning#what-does-lightning-control-for-me)
- [Tensorboard integration](https://github.com/PytorchLightning/pytorch-lightning#tensorboard) - [Tensorboard integration](https://github.com/williamFalcon/pytorch-lightning#tensorboard)
- [Lightning features](https://github.com/PytorchLightning/pytorch-lightning#lightning-automates-all-of-the-following-each-is-also-configurable) - [Lightning features](https://github.com/williamFalcon/pytorch-lightning#lightning-automates-all-of-the-following-each-is-also-configurable)
- [Examples](https://github.com/PytorchLightning/pytorch-lightning#examples) - [Demos](https://github.com/williamFalcon/pytorch-lightning#demo)
- [Tutorials](https://github.com/PytorchLightning/pytorch-lightning#tutorials) - [Tutorials](https://github.com/williamFalcon/pytorch-lightning#tutorials)
- [Contributing](https://github.com/PytorchLightning/pytorch-lightning/blob/master/.github/CONTRIBUTING.md) - [Contributing](https://github.com/williamFalcon/pytorch-lightning/blob/master/CONTRIBUTING.md)
- [Bleeding edge install](https://github.com/PytorchLightning/pytorch-lightning#bleeding-edge) - [Bleeding edge install](https://github.com/williamFalcon/pytorch-lightning#bleeding-edge)
- [Lightning Design Principles](https://github.com/PytorchLightning/pytorch-lightning#lightning-design-principles) - [Lightning Design Principles](https://github.com/williamFalcon/pytorch-lightning#lightning-design-principles)
- [Asking for help](https://github.com/PytorchLightning/pytorch-lightning#asking-for-help) - [Asking for help](https://github.com/williamFalcon/pytorch-lightning#asking-for-help)
- [FAQ](https://github.com/PytorchLightning/pytorch-lightning#faq) - [FAQ](https://github.com/williamFalcon/pytorch-lightning#faq)
---
---
## How do I do use it? ## How do I do use it?
Think about Lightning as refactoring your research code instead of using a new framework. The research code goes into a [LightningModule](https://pytorch-lightning.rtfd.io/en/latest/LightningModule/RequiredTrainerInterface/) which you fit using a Trainer. Think about Lightning as refactoring your research code instead of using a new framework. The research code goes into a [LightningModule]((https://williamfalcon.github.io/pytorch-lightning/LightningModule/RequiredTrainerInterface/)) which you fit using a Trainer.
The LightningModule defines a *system* such as seq-2-seq, GAN, etc... It can ALSO define a simple classifier such as the example below. The LightningModule defines a *system* such as seq-2-seq, GAN, etc... It can ALSO define a simple classifier such as the example below.
To use lightning do 2 things: To use lightning do 2 things:
1. [Define a LightningModule](https://pytorch-lightning.rtfd.io/en/latest/LightningModule/RequiredTrainerInterface/) 1. [Define a LightningModule](https://williamfalcon.github.io/pytorch-lightning/LightningModule/RequiredTrainerInterface/)
**WARNING:** This syntax is for version 0.5.0+ where abbreviations were removed. ```python
```python import os
import os import torch
from torch.nn import functional as F
import torch from torch.utils.data import DataLoader
from torch.nn import functional as F from torchvision.datasets import MNIST
from torch.utils.data import DataLoader import torchvision.transforms as transforms
from torchvision.datasets import MNIST
from torchvision import transforms
import pytorch_lightning as pl
class CoolSystem(pl.LightningModule):
def __init__(self):
super(CoolSystem, self).__init__()
# not the best model...
self.l1 = torch.nn.Linear(28 * 28, 10)
def forward(self, x):
return torch.relu(self.l1(x.view(x.size(0), -1)))
def training_step(self, batch, batch_idx):
# REQUIRED
x, y = batch
y_hat = self.forward(x)
loss = F.cross_entropy(y_hat, y)
tensorboard_logs = {'train_loss': loss}
return {'loss': loss, 'log': tensorboard_logs}
def validation_step(self, batch, batch_idx):
# OPTIONAL
x, y = batch
y_hat = self.forward(x)
return {'val_loss': F.cross_entropy(y_hat, y)}
def validation_end(self, outputs):
# OPTIONAL
avg_loss = torch.stack([x['val_loss'] for x in outputs]).mean()
tensorboard_logs = {'val_loss': avg_loss}
return {'avg_val_loss': avg_loss, 'log': tensorboard_logs}
def test_step(self, batch, batch_idx):
# OPTIONAL
x, y = batch
y_hat = self.forward(x)
return {'test_loss': F.cross_entropy(y_hat, y)}
def test_end(self, outputs):
# OPTIONAL
avg_loss = torch.stack([x['test_loss'] for x in outputs]).mean()
tensorboard_logs = {'test_loss': avg_loss}
return {'avg_test_loss': avg_loss, 'log': tensorboard_logs}
def configure_optimizers(self):
# REQUIRED
# can return multiple optimizers and learning_rate schedulers
# (LBFGS it is automatically supported, no need for closure function)
return torch.optim.Adam(self.parameters(), lr=0.02)
@pl.data_loader
def train_dataloader(self):
# REQUIRED
return DataLoader(MNIST(os.getcwd(), train=True, download=True, transform=transforms.ToTensor()), batch_size=32)
@pl.data_loader
def val_dataloader(self):
# OPTIONAL
return DataLoader(MNIST(os.getcwd(), train=True, download=True, transform=transforms.ToTensor()), batch_size=32)
@pl.data_loader
def test_dataloader(self):
# OPTIONAL
return DataLoader(MNIST(os.getcwd(), train=False, download=True, transform=transforms.ToTensor()), batch_size=32)
```
2. Fit with a [trainer](https://pytorch-lightning.rtfd.io/en/latest/Trainer/)
```python
from pytorch_lightning import Trainer
model = CoolSystem()
# most basic trainer, uses good defaults
trainer = Trainer()
trainer.fit(model)
```
Trainer sets up a tensorboard logger, early stopping and checkpointing by default (you can modify all of them or import pytorch_lightning as pl
use something other than tensorboard).
Here are more advanced examples class CoolSystem(pl.LightningModule):
def __init__(self):
super(CoolSystem, self).__init__()
# not the best model...
self.l1 = torch.nn.Linear(28 * 28, 10)
def forward(self, x):
return torch.relu(self.l1(x.view(x.size(0), -1)))
def training_step(self, batch, batch_nb):
# REQUIRED
x, y = batch
y_hat = self.forward(x)
return {'loss': F.cross_entropy(y_hat, y)}
def validation_step(self, batch, batch_nb):
# OPTIONAL
x, y = batch
y_hat = self.forward(x)
return {'val_loss': F.cross_entropy(y_hat, y)}
def validation_end(self, outputs):
# OPTIONAL
avg_loss = torch.stack([x['val_loss'] for x in outputs]).mean()
return {'avg_val_loss': avg_loss}
def configure_optimizers(self):
# REQUIRED
# can return multiple optimizers and learning_rate schedulers
return torch.optim.Adam(self.parameters(), lr=0.02)
@pl.data_loader
def tng_dataloader(self):
# REQUIRED
return DataLoader(MNIST(os.getcwd(), train=True, download=True, transform=transforms.ToTensor()), batch_size=32)
@pl.data_loader
def val_dataloader(self):
# OPTIONAL
return DataLoader(MNIST(os.getcwd(), train=True, download=True, transform=transforms.ToTensor()), batch_size=32)
@pl.data_loader
def test_dataloader(self):
# OPTIONAL
return DataLoader(MNIST(os.getcwd(), train=True, download=True, transform=transforms.ToTensor()), batch_size=32)
```
2. Fit with a [trainer](https://williamfalcon.github.io/pytorch-lightning/Trainer/)
```python
from pytorch_lightning import Trainer
model = CoolSystem()
# most basic trainer, uses good defaults
trainer = Trainer()
trainer.fit(model)
```
Or with tensorboard logger and some options turned on such as multi-gpu, etc...
```python ```python
from test_tube import Experiment
# PyTorch summarywriter with a few bells and whistles
exp = Experiment(save_dir=os.getcwd())
# train on cpu using only 10% of the data (for demo purposes) # train on cpu using only 10% of the data (for demo purposes)
trainer = Trainer(max_epochs=1, train_percent_check=0.1) # pass in experiment for automatic tensorboard logging.
trainer = Trainer(experiment=exp, max_nb_epochs=1, train_percent_check=0.1)
# train on 4 gpus (lightning chooses GPUs for you) # train on 4 gpus
# trainer = Trainer(max_epochs=1, gpus=4, distributed_backend='ddp') # trainer = Trainer(experiment=exp, max_nb_epochs=1, gpus=[0, 1, 2, 3])
# train on 4 gpus (you choose GPUs)
# trainer = Trainer(max_epochs=1, gpus=[0, 1, 3, 7], distributed_backend='ddp')
# train on 32 gpus across 4 nodes (make sure to submit appropriate SLURM job) # train on 32 gpus across 4 nodes (make sure to submit appropriate SLURM job)
# trainer = Trainer(max_epochs=1, gpus=8, num_gpu_nodes=4, distributed_backend='ddp') # trainer = Trainer(experiment=exp, max_nb_epochs=1, gpus=[0, 1, 2, 3, 4, 5, 6, 7], nb_gpu_nodes=4)
# train (1 epoch only here for demo) # train (1 epoch only here for demo)
trainer.fit(model) trainer.fit(model)
# view tensorboard logs # view tensorflow logs
logging.info(f'View tensorboard logs by running\ntensorboard --logdir {os.getcwd()}') print('View tensorboard logs by running\ntensorboard --logdir %s' % os.getcwd())
logging.info('and going to http://localhost:6006 on your browser') print('and going to http://localhost:6006 on your browser')
``` ```
## What does lightning control for me?
Everything in gray!
You define the blue parts using the LightningModule interface:
![Ouverview](./docs/source/_static/overview_flat.jpg)
When you're all done you can even run the test set separately.
```python ```python
trainer.test() # what to do in the training loop
def training_step(self, data_batch, batch_nb):
# what to do in the validation loop
def validation_step(self, data_batch, batch_nb):
# how to aggregate validation_step outputs
def validation_end(self, outputs):
# and your dataloaders
def tng_dataloader():
def val_dataloader():
def test_dataloader():
``` ```
**Could be as complex as seq-2-seq + attention** **Could be as complex as seq-2-seq + attention**
```python ```python
# define what happens for training here # define what happens for training here
def training_step(self, batch, batch_idx): def training_step(self, data_batch, batch_nb):
x, y = batch x, y = data_batch
# define your own forward and loss calculation # define your own forward and loss calculation
hidden_states = self.encoder(x) hidden_states = self.encoder(x)
@@ -240,8 +213,8 @@ def training_step(self, batch, batch_idx):
```python ```python
# define what happens for validation here # define what happens for validation here
def validation_step(self, batch, batch_idx): def validation_step(self, data_batch, batch_nb):
x, y = batch x, y = data_batch
# or as basic as a CNN classification # or as basic as a CNN classification
out = self.forward(x) out = self.forward(x)
@@ -266,64 +239,144 @@ def validation_end(self, outputs):
val_loss_mean /= len(outputs) val_loss_mean /= len(outputs)
val_acc_mean /= len(outputs) val_acc_mean /= len(outputs)
logs = {'val_loss': val_loss_mean.item(), 'val_acc': val_acc_mean.item()} tqdm_dic = {'val_loss': val_loss_mean.item(), 'val_acc': val_acc_mean.item()}
result = {'log': logs} return tqdm_dic
return result
``` ```
## Tensorboard ## Tensorboard
Lightning is fully integrated with tensorboard, MLFlow and supports any logging module. Lightning is fully integrated with tensorboard.
![tensorboard-support](docs/source/_static/images/tf_loss.png) ![tensorboard-support](./docs/source/_static/tf_loss.png)
Lightning also adds a text column with all the hyperparameters for this experiment. Lightning also adds a text column with all the hyperparameters for this experiment.
![tensorboard-support](docs/source/_static/images/tf_tags.png) ![tensorboard-support](./docs/source/_static/tf_tags.png)
## Lightning automates all of the following ([each is also configurable](https://pytorch-lightning.rtfd.io/en/latest/pytorch_lightning.trainer.html)): Simply note the path you set for the Experiment
```python
from test_tube import Experiment
from pytorch-lightning import Trainer
exp = Experiment(save_dir='/some/path')
trainer = Trainer(experiment=exp)
...
```
And run tensorboard from that dir
```bash
tensorboard --logdir /some/path
```
## Lightning automates all of the following ([each is also configurable](https://williamfalcon.github.io/pytorch-lightning/Trainer/)):
- [Running grid search on a cluster](https://pytorch-lightning.rtfd.io/en/latest/pytorch_lightning.trainer.distrib_data_parallel.html) ###### Checkpointing
- [Fast dev run](https://pytorch-lightning.rtfd.io/en/latest/pytorch_lightning.utilities.debugging.html)
- [Logging](https://pytorch-lightning.rtfd.io/en/latest/pytorch_lightning.logging.html)
- [Implement Your Own Distributed (DDP) training](https://pytorch-lightning.rtfd.io/en/latest/pytorch_lightning.core.lightning.html#pytorch_lightning.core.lightning.LightningModule.configure_ddp)
- [Multi-GPU & Multi-node](https://pytorch-lightning.rtfd.io/en/latest/pytorch_lightning.trainer.distrib_parts.html)
- [Training loop](https://pytorch-lightning.rtfd.io/en/latest/pytorch_lightning.trainer.training_loop.html)
- [Hooks](https://pytorch-lightning.rtfd.io/en/latest/pytorch_lightning.core.hooks.html)
- [Configure optimizers](https://pytorch-lightning.rtfd.io/en/latest/pytorch_lightning.core.lightning.html#pytorch_lightning.core.lightning.LightningModule.configure_optimizers)
- [Validations](https://pytorch-lightning.rtfd.io/en/latest/pytorch_lightning.trainer.evaluation_loop.html)
- [Model saving & Restoring training session](https://pytorch-lightning.rtfd.io/en/latest/pytorch_lightning.trainer.training_io.html)
## Examples - [Model saving](https://williamfalcon.github.io/pytorch-lightning/Trainer/Checkpointing/#model-saving)
- [GAN](https://github.com/PytorchLightning/pytorch-lightning/tree/master/pl_examples/domain_templates/gan.py) - [Model loading](https://williamfalcon.github.io/pytorch-lightning/LightningModule/methods/#load-from-metrics)
- [MNIST](https://github.com/PytorchLightning/pytorch-lightning/tree/master/pl_examples/basic_examples) - [Restoring training session](https://williamfalcon.github.io/pytorch-lightning/Trainer/Checkpointing/#restoring-training-session)
- [Other projects using Lightning](https://github.com/PytorchLightning/pytorch-lightning/network/dependents?package_id=UGFja2FnZS0zNzE3NDU4OTM%3D)
- [Multi-node](https://github.com/PytorchLightning/pytorch-lightning/tree/master/pl_examples/multi_node_examples) ###### Computing cluster (SLURM)
- [Running grid search on a cluster](https://williamfalcon.github.io/pytorch-lightning/Trainer/SLURM%20Managed%20Cluster#running-grid-search-on-a-cluster)
- [Walltime auto-resubmit](https://williamfalcon.github.io/pytorch-lightning/Trainer/SLURM%20Managed%20Cluster#walltime-auto-resubmit)
###### Debugging
- [Fast dev run](https://williamfalcon.github.io/pytorch-lightning/Trainer/debugging/#fast-dev-run)
- [Inspect gradient norms](https://williamfalcon.github.io/pytorch-lightning/Trainer/debugging/#inspect-gradient-norms)
- [Log GPU usage](https://williamfalcon.github.io/pytorch-lightning/Trainer/debugging/#Log-gpu-usage)
- [Make model overfit on subset of data](https://williamfalcon.github.io/pytorch-lightning/Trainer/debugging/#make-model-overfit-on-subset-of-data)
- [Print the parameter count by layer](https://williamfalcon.github.io/pytorch-lightning/Trainer/debugging/#print-the-parameter-count-by-layer)
- [Print which gradients are nan](https://williamfalcon.github.io/pytorch-lightning/Trainer/debugging/#print-which-gradients-are-nan)
- [Print input and output size of every module in system](https://williamfalcon.github.io/pytorch-lightning/LightningModule/properties/#example_input_array)
###### Distributed training
- [16-bit mixed precision](https://williamfalcon.github.io/pytorch-lightning/Trainer/Distributed%20training/#16-bit-mixed-precision)
- [Multi-GPU](https://williamfalcon.github.io/pytorch-lightning/Trainer/Distributed%20training/#Multi-GPU)
- [Multi-node](https://williamfalcon.github.io/pytorch-lightning/Trainer/Distributed%20training/#Multi-node)
- [Single GPU](https://williamfalcon.github.io/pytorch-lightning/Trainer/Distributed%20training/#single-gpu)
- [Self-balancing architecture](https://williamfalcon.github.io/pytorch-lightning/Trainer/Distributed%20training/#self-balancing-architecture)
###### Experiment Logging
- [Display metrics in progress bar](https://williamfalcon.github.io/pytorch-lightning/Trainer/Logging/#display-metrics-in-progress-bar)
- [Log metric row every k batches](https://williamfalcon.github.io/pytorch-lightning/Trainer/Logging/#log-metric-row-every-k-batches)
- [Process position](https://williamfalcon.github.io/pytorch-lightning/Trainer/Logging/#process-position)
- [Tensorboard support](https://williamfalcon.github.io/pytorch-lightning/Trainer/Logging/#tensorboard-support)
- [Save a snapshot of all hyperparameters](https://williamfalcon.github.io/pytorch-lightning/Trainer/Logging/#save-a-snapshot-of-all-hyperparameters)
- [Snapshot code for a training run](https://williamfalcon.github.io/pytorch-lightning/Trainer/Logging/#snapshot-code-for-a-training-run)
- [Write logs file to csv every k batches](https://williamfalcon.github.io/pytorch-lightning/Trainer/Logging/#write-logs-file-to-csv-every-k-batches)
###### Training loop
- [Accumulate gradients](https://williamfalcon.github.io/pytorch-lightning/Trainer/Training%20Loop/#accumulated-gradients)
- [Force training for min or max epochs](https://williamfalcon.github.io/pytorch-lightning/Trainer/Training%20Loop/#force-training-for-min-or-max-epochs)
- [Force disable early stop](https://williamfalcon.github.io/pytorch-lightning/Trainer/Training%20Loop/#force-disable-early-stop)
- [Gradient Clipping](https://williamfalcon.github.io/pytorch-lightning/Trainer/Training%20Loop/#gradient-clipping)
- [Hooks](https://williamfalcon.github.io/pytorch-lightning/Trainer/hooks/)
- [Learning rate scheduling](https://williamfalcon.github.io/pytorch-lightning/LightningModule/RequiredTrainerInterface/#configure_optimizers)
- [Use multiple optimizers (like GANs)](https://williamfalcon.github.io/pytorch-lightning/LightningModule/RequiredTrainerInterface/#configure_optimizers)
- [Set how much of the training set to check (1-100%)](https://williamfalcon.github.io/pytorch-lightning/Trainer/Training%20Loop/#set-how-much-of-the-training-set-to-check)
- [Step optimizers at arbitrary intervals](https://williamfalcon.github.io/pytorch-lightning/Trainer/hooks/#optimizer_step)
###### Validation loop
- [Check validation every n epochs](https://williamfalcon.github.io/pytorch-lightning/Trainer/Validation%20loop/#check-validation-every-n-epochs)
- [Hooks](https://williamfalcon.github.io/pytorch-lightning/Trainer/hooks/)
- [Set how much of the validation set to check](https://williamfalcon.github.io/pytorch-lightning/Trainer/Validation%20loop/#set-how-much-of-the-validation-set-to-check)
- [Set how much of the test set to check](https://williamfalcon.github.io/pytorch-lightning/Trainer/Validation%20loop/#set-how-much-of-the-test-set-to-check)
- [Set validation check frequency within 1 training epoch](https://williamfalcon.github.io/pytorch-lightning/Trainer/Validation%20loop/#set-validation-check-frequency-within-1-training-epoch)
- [Set the number of validation sanity steps](https://williamfalcon.github.io/pytorch-lightning/Trainer/Validation%20loop/#set-the-number-of-validation-sanity-steps)
## Demo
```bash
# install lightning
pip install pytorch-lightning
# clone lightning for the demo
git clone https://github.com/williamFalcon/pytorch-lightning.git
cd pytorch-lightning
cd examples/new_project_templates/
# all of the following demos use the SAME model to show no modification needs to be made to your code
# train on cpu
python single_cpu_template.py
# train on multiple-gpus
python single_gpu_node_template.py --gpus "0,1"
# train on 32 gpus on a cluster (run on a SLURM managed cluster)
python multi_node_cluster_template.py --nb_gpu_nodes 4 --gpus '0,1,2,3,4,5,6,7'
```
## Tutorials ## Tutorials
- [Basic Lightning use](https://towardsdatascience.com/supercharge-your-ai-research-with-pytorch-lightning-337948a99eec) - [Basic Lightning use](https://towardsdatascience.com/supercharge-your-ai-research-with-pytorch-lightning-337948a99eec)
- [9 key speed features in Pytorch-Lightning](https://towardsdatascience.com/9-tips-for-training-lightning-fast-neural-networks-in-pytorch-8e63a502f565) - [9 key speed features in Pytorch-Lightning](https://towardsdatascience.com/9-tips-for-training-lightning-fast-neural-networks-in-pytorch-8e63a502f565)
- [SLURM, multi-node training with Lightning](https://towardsdatascience.com/trivial-multi-node-training-with-pytorch-lightning-ff75dfb809bd) - [SLURM, multi-node training with Lightning](https://towardsdatascience.com/trivial-multi-node-training-with-pytorch-lightning-ff75dfb809bd)
--- ---
## Asking for help ## Asking for help
Welcome to the Lightning community! Welcome to the Lightning community!
If you have any questions, feel free to: If you have any questions, feel free to:
1. [read the docs](https://pytorch-lightning.rtfd.io/en/latest/). 1. [read the docs](https://williamfalcon.github.io/pytorch-lightning/).
2. [Search through the issues](https://github.com/PytorchLightning/pytorch-lightning/issues?utf8=%E2%9C%93&q=my++question). 2. [Search through the issues](https://github.com/williamFalcon/pytorch-lightning/issues?utf8=%E2%9C%93&q=my++question).
3. [Ask on stackoverflow](https://stackoverflow.com/questions/ask?guided=false) with the tag pytorch-lightning. 3. [Ask on stackoverflow](https://stackoverflow.com/questions/ask?guided=false) with the tag pytorch-lightning.
If no one replies to you quickly enough, feel free to post the stackoverflow link to our Gitter chat! If no one replies to you quickly enough, feel free to post the stackoverflow link to our Gitter chat!
To chat with the rest of us visit our [gitter channel](https://gitter.im/PyTorch-Lightning/community)! To chat with the rest of us visit our [gitter channel](https://gitter.im/PyTorch-Lightning/community?utm_source=share-link&utm_medium=link&utm_campaign=share-link)!
--- ---
## FAQ ## FAQ
**How do I use Lightning for rapid research?** **How do I use Lightning for rapid research?**
[Here's a walk-through](https://pytorch-lightning.rtfd.io/en/latest/) [Here's a walk-through](https://williamfalcon.github.io/pytorch-lightning/)
**Why was Lightning created?** **Why was Lightning created?**
Lightning has 3 goals in mind: Lightning has 3 goals in mind:
@@ -344,49 +397,22 @@ Nope.
Nope. Please use anaconda or miniconda. Nope. Please use anaconda or miniconda.
**Which PyTorch versions do you support?** **Which PyTorch versions do you support?**
- **PyTorch 1.1.0** ##### PyTorch 1.1.0
```bash ```bash
# install pytorch 1.1.0 using the official instructions # install pytorch 1.1.0 using the official instructions
# install test-tube 0.6.7.6 which supports 1.1.0
pip install test-tube==0.6.7.6
# install latest Lightning version without upgrading deps
pip install -U --no-deps pytorch-lightning
```
- **PyTorch 1.2.0, 1.3.0,**
Install via pip as normal
## Custom installation # install test-tube 0.6.7.6 which supports 1.1.0
pip install test-tube==0.6.7.6
### Bleeding edge # install latest Lightning version without upgrading deps
pip install -U --no-deps pytorch-lightning
```
If you can't wait for the next release, install the most up to date code with: ##### PyTorch 1.2.0
* using GIT (locally clone whole repo with full history) Install via pip as normal
```bash
pip install git+https://github.com/PytorchLightning/pytorch-lightning.git@master --upgrade
```
* using instant zip (last state of the repo without git history)
```bash
pip install https://github.com/PytorchLightning/pytorch-lightning/archive/master.zip --upgrade
```
### Any release installation ## Bleeding edge
If you can't wait for the next release, install the most up to date code with:
You can also install any past release `0.X.Y` from this repository:
```bash ```bash
pip install https://github.com/PytorchLightning/pytorch-lightning/archive/0.X.Y.zip --upgrade pip install git+https://github.com/williamFalcon/pytorch-lightning.git@master --upgrade
```
## Bibtex
If you want to cite the framework feel free to use this (but only if you loved it 😊):
```
@misc{Falcon2019,
author = {Falcon, W.A. et al.},
title = {PyTorch Lightning},
year = {2019},
publisher = {GitHub},
journal = {GitHub repository},
howpublished = {\url{https://github.com/PytorchLightning/pytorch-lightning}}
}
``` ```
+5 -9
View File
@@ -44,13 +44,11 @@ install:
# purpose but it is problematic because it tends to cancel builds pushed # purpose but it is problematic because it tends to cancel builds pushed
# directly to master instead of just PR builds (or the converse). # directly to master instead of just PR builds (or the converse).
- SET PATH=%PYTHON%;%PYTHON%\\Scripts;%path% - SET PATH=%PYTHON%;%PYTHON%\\Scripts;%path%
#- pip install -U --user "pip<19.3" - pip install -U --user pip
- python -m pip install -r requirements.txt -f https://download.pytorch.org/whl/torch_stable.html - pip install -r requirements.txt -f https://download.pytorch.org/whl/torch_stable.html
- python -m pip install -r ./tests/requirements.txt - pip install -r ./tests/requirements.txt
- python -m pip install pytest-flake8
# scripts to run before tests (working directory and environment changes # scripts to run before tests (working directory and environment changes are persisted from the previous steps such as "before_build")
# are persisted from the previous steps such as "before_build")
before_test: before_test:
- python --version - python --version
- pip --version - pip --version
@@ -59,9 +57,7 @@ before_test:
# to run your custom scripts instead of automatic tests # to run your custom scripts instead of automatic tests
test_script: test_script:
- coverage run --source pytorch_lightning -m py.test pytorch_lightning tests pl_examples -v --doctest-modules --flake8 - tox --sitepackages --parallel auto
#- python setup.py sdist
#- twine check dist/*
on_success: on_success:
- coverage report - coverage report
@@ -0,0 +1,640 @@
# Lightning Module interface
[[Github Code](https://github.com/williamFalcon/pytorch-lightning/blob/master/pytorch_lightning/root_module/root_module.py)]
A lightning module is a strict superclass of nn.Module, it provides a standard interface for the trainer to interact with the model.
The easiest thing to do is copy the [minimal example](https://williamfalcon.github.io/pytorch-lightning/LightningModule/RequiredTrainerInterface/#minimal-example) below and modify accordingly.
Otherwise, to Define a Lightning Module, implement the following methods:
**Required**:
- [training_step](RequiredTrainerInterface.md#training_step)
- [tng_dataloader](RequiredTrainerInterface.md#tng_dataloader)
- [configure_optimizers](RequiredTrainerInterface.md#configure_optimizers)
**Optional**:
- [validation_step](RequiredTrainerInterface.md#validation_step)
- [validation_end](RequiredTrainerInterface.md#validation_end)
- [test_step](RequiredTrainerInterface.md#test_step)
- [test_end](RequiredTrainerInterface.md#test_end)
- [val_dataloader](RequiredTrainerInterface.md#val_dataloader)
- [test_dataloader](RequiredTrainerInterface.md#test_dataloader)
- [on_save_checkpoint](RequiredTrainerInterface.md#on_save_checkpoint)
- [on_load_checkpoint](RequiredTrainerInterface.md#on_load_checkpoint)
- [update_tng_log_metrics](RequiredTrainerInterface.md#update_tng_log_metrics)
- [add_model_specific_args](RequiredTrainerInterface.md#add_model_specific_args)
---
### Minimal example
```python
import os
import torch
from torch.nn import functional as F
from torch.utils.data import DataLoader
from torchvision.datasets import MNIST
import torchvision.transforms as transforms
import pytorch_lightning as pl
class CoolModel(pl.LightningModule):
def __init__(self):
super(CoolModel, self).__init__()
# not the best model...
self.l1 = torch.nn.Linear(28 * 28, 10)
def forward(self, x):
return torch.relu(self.l1(x.view(x.size(0), -1)))
def training_step(self, batch, batch_nb):
# REQUIRED
x, y = batch
y_hat = self.forward(x)
return {'loss': F.cross_entropy(y_hat, y)}
def validation_step(self, batch, batch_nb):
# OPTIONAL
x, y = batch
y_hat = self.forward(x)
return {'val_loss': F.cross_entropy(y_hat, y)}
def validation_end(self, outputs):
# OPTIONAL
avg_loss = torch.stack([x['val_loss'] for x in outputs]).mean()
return {'avg_val_loss': avg_loss}
def test_step(self, batch, batch_nb):
# OPTIONAL
x, y = batch
y_hat = self.forward(x)
return {'test_loss': F.cross_entropy(y_hat, y)}
def test_end(self, outputs):
# OPTIONAL
avg_loss = torch.stack([x['test_loss'] for x in outputs]).mean()
return {'avg_test_loss': avg_loss}
def configure_optimizers(self):
# REQUIRED
return [torch.optim.Adam(self.parameters(), lr=0.02)]
@pl.data_loader
def tng_dataloader(self):
return DataLoader(MNIST(os.getcwd(), train=True, download=True, transform=transforms.ToTensor()), batch_size=32)
@pl.data_loader
def val_dataloader(self):
# OPTIONAL
# can also return a list of val dataloaders
return DataLoader(MNIST(os.getcwd(), train=True, download=True, transform=transforms.ToTensor()), batch_size=32)
@pl.data_loader
def test_dataloader(self):
# OPTIONAL
# can also return a list of test dataloaders
return DataLoader(MNIST(os.getcwd(), train=False, download=True, transform=transforms.ToTensor()), batch_size=32)
```
---
### How do these methods fit into the broader training?
The LightningModule interface is on the right. Each method corresponds to a part of a research project. Lightning automates everything not in blue.
<p align="center">
<a href="https://github.com/williamFalcon/pytorch-lightning/blob/master/docs/source/_static/overview_flat.jpg">
<img alt="" src="https://github.com/williamFalcon/pytorch-lightning/blob/master/docs/source/_static/overview_flat.jpg" height="900px">
</a>
</p>
## Required Methods
### training_step
``` {.python}
def training_step(self, data_batch, batch_nb)
```
In this step you'd normally do the forward pass and calculate the loss for a batch. You can also do fancier things like multiple forward passes or something specific to your model.
**Params**
| Param | description |
|---|---|
| data_batch | The output of your dataloader. A tensor, tuple or list |
| batch_nb | Integer displaying which batch this is |
**Return**
Dictionary or OrderedDict
| key | value | is required |
|---|---|---|
| loss | tensor scalar | Y |
| prog | Dict for progress bar display. Must have only tensors | N |
**Example**
``` {.python}
def training_step(self, data_batch, batch_nb):
x, y, z = data_batch
# implement your own
out = self.forward(x)
loss = self.loss(out, x)
output = {
'loss': loss, # required
'prog': {'tng_loss': loss, 'batch_nb': batch_nb} # optional
}
# return a dict
return output
```
If you define multiple optimizers, this step will also be called with an additional ```optimizer_idx``` param.
``` {.python}
# Multiple optimizers (ie: GANs)
def training_step(self, data_batch, batch_nb, optimizer_idx):
if optimizer_idx == 0:
# do training_step with encoder
if optimizer_idx == 1:
# do training_step with decoder
```
---
### tng_dataloader
``` {.python}
@pl.data_loader
def tng_dataloader(self)
```
Called by lightning during training loop. Make sure to use the @pl.data_loader decorator, this ensures not calling this function until the data are needed.
##### Return
PyTorch DataLoader
**Example**
``` {.python}
@pl.data_loader
def tng_dataloader(self):
transform = transforms.Compose([transforms.ToTensor(), transforms.Normalize((0.5,), (1.0,))])
dataset = MNIST(root='/path/to/mnist/', train=True, transform=transform, download=True)
loader = torch.utils.data.DataLoader(
dataset=dataset,
batch_size=self.hparams.batch_size,
shuffle=True
)
return loader
```
---
### configure_optimizers
``` {.python}
def configure_optimizers(self)
```
Set up as many optimizers and (optionally) learning rate schedulers as you need. Normally you'd need one. But in the case of GANs or something more esoteric you might have multiple.
Lightning will call .backward() and .step() on each one in every epoch. If you use 16 bit precision it will also handle that.
**Note:** If you use multiple optimizers, training_step will have an additional ```optimizer_idx``` parameter.
##### Return
Return any of these 3 options:
Single optimizer
List or Tuple - List of optimizers
Two lists - The first list has multiple optimizers, the second a list of learning-rate schedulers
**Example**
``` {.python}
# most cases
def configure_optimizers(self):
opt = Adam(self.parameters(), lr=0.01)
return opt
# multiple optimizer case (eg: GAN)
def configure_optimizers(self):
generator_opt = Adam(self.model_gen.parameters(), lr=0.01)
disriminator_opt = Adam(self.model_disc.parameters(), lr=0.02)
return generator_opt, disriminator_opt
# example with learning_rate schedulers
def configure_optimizers(self):
generator_opt = Adam(self.model_gen.parameters(), lr=0.01)
disriminator_opt = Adam(self.model_disc.parameters(), lr=0.02)
discriminator_sched = CosineAnnealing(discriminator_opt, T_max=10)
return [generator_opt, disriminator_opt], [discriminator_sched]
```
If you need to control how often those optimizers step or override the default .step() schedule, override
the [optimizer_step](https://williamfalcon.github.io/pytorch-lightning/Trainer/hooks/#optimizer_step) hook.
## Optional Methods
### validation_step
``` {.python}
# if you have one val dataloader:
def validation_step(self, data_batch, batch_nb)
# if you have multiple val dataloaders:
def validation_step(self, data_batch, batch_nb, dataloader_idx)
```
**OPTIONAL**
If you don't need to validate you don't need to implement this method.
In this step you'd normally generate examples or calculate anything of interest such as accuracy.
The dict you return here will be available in the `validation_end` method.
**Params**
| Param | description |
|---|---|
| data_batch | The output of your dataloader. A tensor, tuple or list |
| batch_nb | Integer displaying which batch this is |
| dataloader_i | Integer displaying which dataloader this is (only if multiple val datasets used) |
**Return**
| Return | description | optional |
|---|---|---|
| dict | Dict or OrderedDict with metrics to display in progress bar. All keys must be tensors. | Y |
**Example**
``` {.python}
# CASE 1: A single validation dataset
def validation_step(self, data_batch, batch_nb):
x, y = data_batch
# implement your own
out = self.forward(x)
loss = self.loss(out, y)
# log 6 example images
# or generated text... or whatever
sample_imgs = x[:6]
grid = torchvision.utils.make_grid(sample_imgs)
self.experiment.add_image('example_images', grid, 0)
# calculate acc
labels_hat = torch.argmax(out, dim=1)
val_acc = torch.sum(y == labels_hat).item() / (len(y) * 1.0)
# all optional...
# return whatever you need for the collation function validation_end
output = OrderedDict({
'val_loss': loss_val,
'val_acc': torch.tensor(val_acc), # everything must be a tensor
})
# return an optional dict
return output
```
If you pass in multiple validation datasets, validation_step will have an additional argument.
```python
# CASE 2: multiple validation datasets
def validation_step(self, data_batch, batch_nb, dataset_idx):
# dataset_idx tells you which dataset this is.
```
The ```dataset_idx``` corresponds to the order of datasets returned in ```val_dataloader```.
---
### validation_end
``` {.python}
def validation_end(self, outputs)
```
If you didn't define a validation_step, this won't be called.
Called at the end of the validation loop with the output of each validation_step. Called once per validation dataset.
The outputs here are strictly for the progress bar. If you don't need to display anything, don't return anything.
**Params**
| Param | description |
|---|---|
| outputs | List of outputs you defined in validation_step |
**Return**
| Return | description | optional |
|---|---|---|
| dict | Dict of OrderedDict with metrics to display in progress bar | Y |
**Example**
``` {.python}
def validation_end(self, outputs):
"""
Called at the end of validation to aggregate outputs
:param outputs: list of individual outputs of each validation step
:return:
"""
val_loss_mean = 0
val_acc_mean = 0
for output in outputs:
val_loss_mean += output['val_loss']
val_acc_mean += output['val_acc']
val_loss_mean /= len(outputs)
val_acc_mean /= len(outputs)
tqdm_dic = {'val_loss': val_loss_mean.item(), 'val_acc': val_acc_mean.item()}
return tqdm_dic
```
### test_step
``` {.python}
# if you have one test dataloader:
def test_step(self, data_batch, batch_nb)
# if you have multiple test dataloaders:
def test_step(self, data_batch, batch_nb, dataloader_idx)
```
**OPTIONAL**
If you don't need to test you don't need to implement this method.
In this step you'd normally generate examples or calculate anything of interest such as accuracy.
The dict you return here will be available in the `test_end` method.
This function is used when you execute `trainer.test()`.
**Params**
| Param | description |
|---|---|
| data_batch | The output of your dataloader. A tensor, tuple or list |
| batch_nb | Integer displaying which batch this is |
| dataloader_i | Integer displaying which dataloader this is (only if multiple test datasets used) |
**Return**
| Return | description | optional |
|---|---|---|
| dict | Dict or OrderedDict with metrics to display in progress bar. All keys must be tensors. | Y |
**Example**
``` {.python}
# CASE 1: A single test dataset
def test_step(self, data_batch, batch_nb):
x, y = data_batch
# implement your own
out = self.forward(x)
loss = self.loss(out, y)
# calculate acc
labels_hat = torch.argmax(out, dim=1)
test_acc = torch.sum(y == labels_hat).item() / (len(y) * 1.0)
# all optional...
# return whatever you need for the collation function test_end
output = OrderedDict({
'test_loss': loss_test,
'test_acc': torch.tensor(test_acc), # everything must be a tensor
})
# return an optional dict
return output
```
If you pass in multiple test datasets, test_step will have an additional argument.
```python
# CASE 2: multiple test datasets
def test_step(self, data_batch, batch_nb, dataset_idx):
# dataset_idx tells you which dataset this is.
```
The ```dataset_idx``` corresponds to the order of datasets returned in ```test_dataloader```.
---
### test_end
``` {.python}
def test_end(self, outputs)
```
If you didn't define a test_step, this won't be called.
Called at the end of the test step with the output of each test_step. Called once per test dataset.
The outputs here are strictly for the progress bar. If you don't need to display anything, don't return anything.
**Params**
| Param | description |
|---|---|
| outputs | List of outputs you defined test_step |
**Return**
| Return | description | optional |
|---|---|---|
| dict | Dict of OrderedDict with metrics to display in progress bar | Y |
**Example**
``` {.python}
def test_end(self, outputs):
"""
Called at the end of test to aggregate outputs
:param outputs: list of individual outputs of each test step
:return:
"""
test_loss_mean = 0
test_acc_mean = 0
for output in outputs:
test_loss_mean += output['test_loss']
test_acc_mean += output['test_acc']
test_loss_mean /= len(outputs)
test_acc_mean /= len(outputs)
tqdm_dic = {'test_loss': test_loss_mean.item(), 'test_acc': test_acc_mean.item()}
return tqdm_dic
```
---
### on_save_checkpoint
``` {.python}
def on_save_checkpoint(self, checkpoint)
```
Called by lightning to checkpoint your model. Lightning saves the training state (current epoch, global_step, etc)
and also saves the model state_dict. If you want to save anything else, use this method to add your own
key-value pair.
##### Return
Nothing
**Example**
``` {.python}
def on_save_checkpoint(self, checkpoint):
# 99% of use cases you don't need to implement this method
checkpoint['something_cool_i_want_to_save'] = my_cool_pickable_object
```
---
### on_load_checkpoint
``` {.python}
def on_load_checkpoint(self, checkpoint)
```
Called by lightning to restore your model. Lighting auto-restores global step, epoch, etc...
It also restores the model state_dict.
If you saved something with **on_save_checkpoint** this is your chance to restore this.
##### Return
Nothing
**Example**
``` {.python}
def on_load_checkpoint(self, checkpoint):
# 99% of the time you don't need to implement this method
self.something_cool_i_want_to_save = checkpoint['something_cool_i_want_to_save']
```
---
### val_dataloader
``` {.python}
@pl.data_loader
def val_dataloader(self)
```
**OPTIONAL**
If you don't need a validation dataset and a validation_step, you don't need to implement this method.
Called by lightning during validation loop. Make sure to use the @pl.data_loader decorator, this ensures not calling this function until the data are needed.
##### Return
PyTorch DataLoader or list of PyTorch Dataloaders.
**Example**
``` {.python}
@pl.data_loader
def val_dataloader(self):
transform = transforms.Compose([transforms.ToTensor(), transforms.Normalize((0.5,), (1.0,))])
dataset = MNIST(root='/path/to/mnist/', train=False, transform=transform, download=True)
loader = torch.utils.data.DataLoader(
dataset=dataset,
batch_size=self.hparams.batch_size,
shuffle=True
)
return loader
# can also return multiple dataloaders
@pl.data_loader
def val_dataloader(self):
return [loader_a, loader_b, ..., loader_n]
```
In the case where you return multiple val_dataloaders, the validation_step will have an arguement ```dataset_idx```
which matches the order here.
---
### test_dataloader
``` {.python}
@pl.data_loader
def test_dataloader(self)
```
**OPTIONAL**
If you don't need a test dataset and a test_step, you don't need to implement this method.
Called by lightning during test loop. Make sure to use the @pl.data_loader decorator, this ensures not calling this function until the data are needed.
##### Return
PyTorch DataLoader
**Example**
``` {.python}
@pl.data_loader
def test_dataloader(self):
transform = transforms.Compose([transforms.ToTensor(), transforms.Normalize((0.5,), (1.0,))])
dataset = MNIST(root='/path/to/mnist/', train=False, transform=transform, download=True)
loader = torch.utils.data.DataLoader(
dataset=dataset,
batch_size=self.hparams.batch_size,
shuffle=True
)
return loader
```
---
### update_tng_log_metrics
``` {.python}
def update_tng_log_metrics(self, logs)
```
Called by lightning right before it logs metrics for this batch.
This is a chance to amend or add to the metrics about to be logged.
##### Return
Dict
**Example**
``` {.python}
def update_tng_log_metrics(self, logs):
# modify or add to logs
return logs
```
---
### add_model_specific_args
``` {.python}
@staticmethod
def add_model_specific_args(parent_parser, root_dir)
```
Lightning has a list of default argparse commands.
This method is your chance to add or modify commands specific to your model.
The [hyperparameter argument parser](https://williamfalcon.github.io/test-tube/hyperparameter_optimization/HyperOptArgumentParser/) is available anywhere in your model by calling self.hparams.
##### Return
An argument parser
**Example**
``` {.python}
@staticmethod
def add_model_specific_args(parent_parser, root_dir):
parser = HyperOptArgumentParser(strategy=parent_parser.strategy, parents=[parent_parser])
# param overwrites
# parser.set_defaults(gradient_clip=5.0)
# network params
parser.opt_list('--drop_prob', default=0.2, options=[0.2, 0.5], type=float, tunable=False)
parser.add_argument('--in_features', default=28*28)
parser.add_argument('--out_features', default=10)
parser.add_argument('--hidden_dim', default=50000) # use 500 for CPU, 50000 for GPU to see speed difference
# data
parser.add_argument('--data_root', default=os.path.join(root_dir, 'mnist'), type=str)
# training params (opt)
parser.opt_list('--learning_rate', default=0.001, type=float, options=[0.0001, 0.0005, 0.001, 0.005],
tunable=False)
parser.opt_list('--batch_size', default=256, type=int, options=[32, 64, 128, 256], tunable=False)
parser.opt_list('--optimizer_name', default='adam', type=str, options=['adam'], tunable=False)
return parser
```
+50
View File
@@ -0,0 +1,50 @@
Lightning modules are strict superclasses of torch.nn.Module. A LightningModule offers the following in addition to that API.
---
### freeze
Freeze all params for inference
```{.python}
model = MyLightningModule(...)
model.freeze()
```
---
### load_from_metrics
This is the easiest/fastest way which uses the meta_tags.csv file from test-tube to rebuild the model.
The meta_tags.csv file can be found in the test-tube experiment save_dir.
```{.python}
pretrained_model = MyLightningModule.load_from_metrics(
weights_path='/path/to/pytorch_checkpoint.ckpt',
tags_csv='/path/to/test_tube/experiment/version/meta_tags.csv',
on_gpu=True,
map_location=None
)
# predict
pretrained_model.eval()
pretrained_model.freeze()
y_hat = pretrained_model(x)
```
**Params**
| Param | description |
|---|---|
| weights_path | Path to a PyTorch checkpoint |
| tags_csv | Path to meta_tags.csv file generated by the test-tube Experiment |
| on_gpu | if True, puts model on GPU. Make sure to use transforms option if model devices have changed |
| map_location | A dictionary mapping saved weight GPU devices to new GPU devices |
**Returns**
LightningModule - The pretrained LightningModule
---
### unfreeze
Unfreeze all params for inference
```{.python}
model = MyLightningModule(...)
model.unfreeze()
```
+54
View File
@@ -0,0 +1,54 @@
A LightningModule has the following properties which you can access at any time
---
#### current_epoch
The current epoch
---
#### dtype
Current dtype
---
#### experiment
An instance of test-tube Experiment which you can use to log anything for tensorboard (subclass of [PyTorch SummaryWriter](https://pytorch.org/docs/stable/tensorboard.html)).
```{.python}
self.experiment.add_embedding(...)
self.experiment.log({'val_loss': 0.9})
self.experiment.add_scalars(...)
```
---
#### global_step
Total training batches seen across all epochs
---
#### gradient_clip
The current gradient clip value
---
#### on_gpu
True if your model is currently running on GPUs. Useful to set flags around the LightningModule for different CPU vs GPU behavior.
---
#### trainer
Last resort access to any state the trainer has. Changing certain properties here could affect your training run.
```{.python}
self.trainer.optimizers
self.trainer.current_epoch
...
```
## Debugging
The LightningModule also offers these tricks to help debug.
---
#### example_input_array
In the LightningModule init, you can set a dummy tensor for this property
to get a print out of sizes coming into and out of every layer.
```python
def __init__(self):
# put the dimensions of the first input to your system
self.example_input_array = torch.rand(5, 28 * 28)
```
-19
View File
@@ -1,19 +0,0 @@
# Minimal makefile for Sphinx documentation
#
# You can set these variables from the command line.
SPHINXOPTS =
SPHINXBUILD = sphinx-build
SOURCEDIR = source
BUILDDIR = build
# Put it first so that "make" without argument is like "make help".
help:
@$(SPHINXBUILD) -M help "$(SOURCEDIR)" "$(BUILDDIR)" $(SPHINXOPTS) $(O)
.PHONY: help Makefile
# Catch-all target: route all unknown targets to Sphinx using the new
# "make mode" option. $(O) is meant as a shortcut for $(SPHINXOPTS).
%: Makefile
@$(SPHINXBUILD) -M $@ "$(SOURCEDIR)" "$(BUILDDIR)" $(SPHINXOPTS) $(O)
+69
View File
@@ -0,0 +1,69 @@
Lightning can automate saving and loading checkpoints.
---
### Model saving
To enable checkpointing, define the checkpoint callback and give it to the trainer.
``` {.python}
from pytorch_lightning.callbacks import ModelCheckpoint
checkpoint_callback = ModelCheckpoint(
filepath='/path/to/store/weights.ckpt',
save_best_only=True,
verbose=True,
monitor='val_loss',
mode='min'
)
trainer = Trainer(checkpoint_callback=checkpoint_callback)
```
---
### Restoring training session
You might want to not only load a model but also continue training it. Use this method to
restore the trainer state as well. This will continue from the epoch and global step you last left off.
However, the dataloaders will start from the first batch again (if you shuffled it shouldn't matter).
Lightning will restore the session if you pass an experiment with the same version and there's a saved checkpoint.
``` {.python}
from test_tube import Experiment
exp = Experiment(version=a_previous_version_with_a_saved_checkpoint)
trainer = Trainer(experiment=exp)
# this fit call loads model weights and trainer state
# the trainer continues seamlessly from where you left off
# without having to do anything else.
trainer.fit(model)
```
The trainer restores:
- global_step
- current_epoch
- All optimizers
- All lr_schedulers
- Model weights
You can even change the logic of your model as long as the weights and "architecture" of
the system isn't different. If you add a layer, for instance, it might not work.
At a rough level, here's [what happens inside Trainer](https://github.com/williamFalcon/pytorch-lightning/blob/master/pytorch_lightning/root_module/model_saving.py#L63):
```python
self.global_step = checkpoint['global_step']
self.current_epoch = checkpoint['epoch']
# restore the optimizers
optimizer_states = checkpoint['optimizer_states']
for optimizer, opt_state in zip(self.optimizers, optimizer_states):
optimizer.load_state_dict(opt_state)
# restore the lr schedulers
lr_schedulers = checkpoint['lr_schedulers']
for scheduler, lrs_state in zip(self.lr_schedulers, lr_schedulers):
scheduler.load_state_dict(lrs_state)
# uses the model you passed into trainer
model.load_state_dict(checkpoint['state_dict'])
```
+143
View File
@@ -0,0 +1,143 @@
Lightning makes multi-gpu training and 16 bit training trivial.
*Note:*
None of the flags below require changing anything about your lightningModel definition.
---
#### Choosing a backend
Lightning supports two backends. DataParallel and DistributedDataParallel. Both can be used for single-node multi-GPU training.
For multi-node training you must use DistributedDataParallel.
You can toggle between each mode by setting this flag.
``` {.python}
# DEFAULT uses DataParallel
trainer = Trainer(distributed_backend='dp')
# change to distributed data parallel
trainer = Trainer(distributed_backend='ddp')
```
If you request multiple nodes, the back-end will auto-switch to ddp.
We recommend you use DistributedDataparallel even for single-node multi-GPU training. It is MUCH faster than DP but *may*
have configuration issues depending on your cluster.
For a deeper understanding of what lightning is doing, feel free to read [this guide](https://medium.com/@_willfalcon/9-tips-for-training-lightning-fast-neural-networks-in-pytorch-8e63a502f565).
---
#### Distributed and 16-bit precision.
Due to an issue with apex and DistributedDataParallel (PyTorch and NVIDIA issue), Lightning does
not allow 16-bit and DP training. We tried to get this to work, but it's an issue on their end.
Below are the possible configurations we support.
| 1 GPU | 1+ GPUs | DP | DDP | 16-bit | command |
|---|---|---|---|---|---|
| Y | | | | | ```Trainer(gpus=[0])``` |
| Y | | | | Y | ```Trainer(gpus=[0], use_amp=True)``` |
| | Y | Y | | | ```Trainer(gpus=[0, ...])``` |
| | Y | | Y | | ```Trainer(gpus=[0, ...], distributed_backend='ddp')``` |
| | Y | | Y | Y | ```Trainer(gpus=[0, ...], distributed_backend='ddp', use_amp=True)``` |
---
#### CUDA flags
CUDA flags make certain GPUs visible to your script.
Lightning sets these for you automatically, there's NO NEED to do this yourself.
```python
# lightning will set according to what you give the trainer
# os.environ["CUDA_DEVICE_ORDER"] = "PCI_BUS_ID"
# os.environ["CUDA_VISIBLE_DEVICES"] = "0"
```
---
#### 16-bit mixed precision
16 bit precision can cut your memory footprint by half. If using volta architecture GPUs it can give a dramatic training speed-up as well.
First, install apex (if install fails, look [here](https://github.com/NVIDIA/apex)):
```bash
$ git clone https://github.com/NVIDIA/apex
$ cd apex
$ pip install -v --no-cache-dir --global-option="--cpp_ext" --global-option="--cuda_ext" ./
```
then set this use_amp to True.
``` {.python}
# DEFAULT
trainer = Trainer(amp_level='O2', use_amp=False)
```
---
#### Single-gpu
Make sure you're on a GPU machine.
```python
# DEFAULT
trainer = Trainer(gpus=[0])
```
---
#### multi-gpu
Make sure you're on a GPU machine. You can set as many GPUs as you want.
In this setting, the model will run on all 8 GPUs at once using DataParallel under the hood.
```python
# to use DataParallel (default)
trainer = Trainer(gpus=[0,1,2,3,4,5,6,7], distributed_backend='dp')
# RECOMMENDED use DistributedDataParallel
trainer = Trainer(gpus=[0,1,2,3,4,5,6,7], distributed_backend='ddp')
```
---
#### Multi-node
Multi-node training is easily done by specifying these flags.
```python
# train on 12*8 GPUs
trainer = Trainer(gpus=[0,1,2,3,4,5,6,7], nb_gpu_nodes=12)
```
In addition, make sure to set up your SLURM job correctly via the [SlurmClusterObject](https://williamfalcon.github.io/test-tube/hpc/SlurmCluster/). In particular, specify the number of tasks per node correctly.
```python
cluster = SlurmCluster(
hyperparam_optimizer=test_tube.HyperOptArgumentParser(),
log_path='/some/path/to/save',
)
# OPTIONAL FLAGS WHICH MAY BE CLUSTER DEPENDENT
# which interface your nodes use for communication
cluster.add_command('export NCCL_SOCKET_IFNAME=^docker0,lo')
# see output of the NCCL connection process
# NCCL is how the nodes talk to each other
cluster.add_command('export NCCL_DEBUG=INFO')
# setting a master port here is a good idea.
cluster.add_command('export MASTER_PORT=%r' % PORT)
# good to load the latest NCCL version
cluster.load_modules(['NCCL/2.4.7-1-cuda.10.0'])
# configure cluster
cluster.per_experiment_nb_nodes = 12
cluster.per_experiment_nb_gpus = 8
cluster.add_slurm_cmd(cmd='ntasks-per-node', value=8, comment='1 task per gpu')
```
Finally, make sure to add a distributed sampler to your dataset. The distributed sampler copies a
portion of your dataset onto each GPU. (World_size = gpus_per_node * nb_nodes).
```python
# ie: this:
dataset = myDataset()
dataloader = Dataloader(dataset)
# becomes:
dataset = myDataset()
dist_sampler = torch.utils.data.distributed.DistributedSampler(dataset)
dataloader = Dataloader(dataset, sampler=dist_sampler)
```
---
#### Self-balancing architecture
Here lightning distributes parts of your module across available GPUs to optimize for speed and memory.
COMING SOON.
+97
View File
@@ -0,0 +1,97 @@
Lighting offers a few options for logging information about model, gpu usage, etc (via test-tube). It also offers printing options for training monitoring.
---
#### Display metrics in progress bar
``` {.python}
# DEFAULT
trainer = Trainer(show_progress_bar=True)
```
---
#### Log metric row every k batches
Every k batches lightning will make an entry in the metrics log
``` {.python}
# DEFAULT (ie: save a .csv log file every 10 batches)
trainer = Trainer(add_log_row_interval=10)
```
---
#### Process position
When running multiple models on the same machine we want to decide which progress bar to use.
Lightning will stack progress bars according to this value.
``` {.python}
# DEFAULT
trainer = Trainer(process_position=0)
# if this is the second model on the node, show the second progress bar below
trainer = Trainer(process_position=1)
```
---
#### Save a snapshot of all hyperparameters
Whenever you call .save() on the test-tube experiment it logs all the hyperparameters in current use.
Give lightning a test-tube Experiment object to automate this for you.
``` {.python}
from test_tube import Experiment
exp = Experiment(...)
Trainer(experiment=exp)
```
---
#### Snapshot code for a training run
Whenever you call .save() on the test-tube experiment it snapshows all code and pushes to a git tag.
Give lightning a test-tube Experiment object to automate this for you.
``` {.python}
from test_tube import Experiment
exp = Experiment(create_git_tag=True)
Trainer(experiment=exp)
```
---
### Tensorboard support
In the LightningModule you can access the experiment logger by doing:
```python
self.experiment
# add image
# Look at PyTorch SummaryWriter docs for what you can do.
self.experiment.add_image(...)
```
The experiment object is a strict subclass of PyTorch SummaryWriter. However, this class
also snapshots every detail about the experiment (data folder paths, code, hyperparams),
and allows you to visualize it using tensorboard.
``` {.python}
from test_tube import Experiment, HyperOptArgumentParser
# exp hyperparams
args = HyperOptArgumentParser()
hparams = args.parse_args()
# this is a summaryWriter with nicer logging structure
exp = Experiment(save_dir='/some/path', create_git_tag=True)
# track experiment details (must be ArgumentParser or HyperOptArgumentParser).
# each option in the parser is tracked
exp.argparse(hparams)
exp.tag({'description': 'running demo'})
# trainer uses the exp object to log exp data
trainer = Trainer(experiment=exp)
trainer.fit(model)
# view logs at:
# tensorboard --logdir /some/path
```
---
#### Write logs file to csv every k batches
Every k batches, lightning will write the new logs to disk
``` {.python}
# DEFAULT (ie: save a .csv log file every 100 batches)
trainer = Trainer(log_save_interval=100)
```
+104
View File
@@ -0,0 +1,104 @@
Lightning supports model training on a cluster managed by SLURM in the following cases:
1. Training on single or multi-cpus only.
2. Training on single or multi-gpus on the same node.
3. Coming SOON: Training across multiple nodes.
---
#### Running grid search on a cluster
To use lightning to run a hyperparameter search (grid-search or random-search) on a cluster do 4 things:
(1). Define the parameters for the grid search
```{.python}
from test_tube import HyperOptArgumentParser
# subclass of argparse
parser = HyperOptArgumentParser(strategy='random_search')
parser.add_argument('--learning_rate', default=0.002, type=float, help='the learning rate')
# let's enable optimizing over the number of layers in the network
parser.opt_list('--nb_layers', default=2, type=int, tunable=True, options=[2, 4, 8])
hparams = parser.parse_args()
```
(2). Define the cluster options in the [SlurmCluster object](https://williamfalcon.github.io/test-tube/hpc/SlurmCluster/) (over 5 nodes and 8 gpus)
```{.python}
from test_tube.hpc import SlurmCluster
# hyperparameters is a test-tube hyper params object
# see https://williamfalcon.github.io/test-tube/hyperparameter_optimization/HyperOptArgumentParser/
hyperparams = args.parse()
# init cluster
cluster = SlurmCluster(
hyperparam_optimizer=hyperparams,
log_path='/path/to/log/results/to',
python_cmd='python3'
)
# let the cluster know where to email for a change in job status (ie: complete, fail, etc...)
cluster.notify_job_status(email='some@email.com', on_done=True, on_fail=True)
# set the job options. In this instance, we'll run 20 different models
# each with its own set of hyperparameters giving each one 1 GPU (ie: taking up 20 GPUs)
cluster.per_experiment_nb_gpus = 8
cluster.per_experiment_nb_nodes = 5
# we'll request 10GB of memory per node
cluster.memory_mb_per_node = 10000
# set a walltime of 10 minues
cluster.job_time = '10:00'
```
(3). Give trainer the cluster_manager in your main function:
```{.python}
from pytorch_lightning import Trainer
def train_fx(trial_hparams, cluster_manager, _):
# hparams has a specific set of hyperparams
my_model = MyLightningModel()
# give the trainer the cluster object
trainer = Trainer(cluster=cluster_manager)
trainer.fit(my_model)
```
(4). Start the grid search
```{.python}
# run the models on the cluster
cluster.optimize_parallel_cluster_gpu(
train_fx,
nb_trials=20,
job_name='my_grid_search_exp_name',
job_display_name='my_exp')
```
That's it! The SlurmCluster object will automatically checkpoint the lightning model and resubmit if it runs into the walltime!
---
#### Walltime auto-resubmit
Lightning automatically resubmits jobs when they reach the walltime. You get this behavior for free if you give lightning
a slurm cluster object.
```{.python}
def my_main_fx(hparams, slurm_manager, _):
trainer = Trainer(cluster=slurm_manager)
```
(See the grid search example above for cluster configuration).
With this feature lightning will:
1. automatically checkpoint the model
2. checkpoint the trainer session
3. resubmit a continuation job.
4. load the checkpoint and trainer session in the new model
+67
View File
@@ -0,0 +1,67 @@
The lightning training loop handles everything except the actual computations of your model. To decide what will happen in your training loop, define the [training_step function](https://williamfalcon.github.io/pytorch-lightning/LightningModule/RequiredTrainerInterface/#training_step).
Below are all the things lightning automates for you in the training loop.
---
#### Accumulated gradients
Accumulated gradients runs K small batches of size N before doing a backwards pass. The effect is a large effective batch size of size KxN.
``` {.python}
# DEFAULT (ie: no accumulated grads)
trainer = Trainer(accumulate_grad_batches=1)
```
---
#### Force training for min or max epochs
It can be useful to force training for a minimum number of epochs or limit to a max number
``` {.python}
# DEFAULT
trainer = Trainer(min_nb_epochs=1, max_nb_epochs=1000)
```
---
#### Force disable early stop
Use this to turn off early stopping and run training to the [max_epoch](#force-training-for-min-or-max-epochs)
``` {.python}
# DEFAULT
trainer = Trainer(enable_early_stop=True)
```
---
#### Gradient Clipping
Gradient clipping may be enabled to avoid exploding gradients.
Specifically, this will [clip the gradient norm computed over all model parameters *together*](https://pytorch.org/docs/stable/nn.html#torch.nn.utils.clip_grad_norm_).
``` {.python}
# DEFAULT (ie: don't clip)
trainer = Trainer(gradient_clip=0)
# clip gradients with norm above 0.5
trainer = Trainer(gradient_clip=0.5)
```
---
#### Inspect gradient norms
Looking at grad norms can help you figure out where training might be going wrong.
``` {.python}
# DEFAULT (-1 doesn't track norms)
trainer = Trainer(track_grad_norm=-1)
# track the LP norm (P=2 here)
trainer = Trainer(track_grad_norm=2)
```
---
#### Set how much of the training set to check
If you don't want to check 100% of the training set (for debugging or if it's huge), set this flag.
train_percent_check will be overwritten by overfit_pct if `overfit_pct > 0`
``` {.python}
# DEFAULT
trainer = Trainer(train_percent_check=1.0)
# check 10% only
trainer = Trainer(train_percent_check=0.1)
```
+63
View File
@@ -0,0 +1,63 @@
The lightning validation loop handles everything except the actual computations of your model. To decide what will happen in your validation loop, define the [validation_step function](https://williamfalcon.github.io/pytorch-lightning/LightningModule/RequiredTrainerInterface/#validation_step).
Below are all the things lightning automates for you in the validation loop.
**Note**
Lightning will run 5 steps of validation in the beginning of training as a sanity check so you don't have to wait until a full epoch to catch possible validation issues.
---
#### Check validation every n epochs
If you have a small dataset you might want to check validation every n epochs
``` {.python}
# DEFAULT
trainer = Trainer(check_val_every_n_epoch=1)
```
---
#### Set how much of the validation set to check
If you don't want to check 100% of the validation set (for debugging or if it's huge), set this flag
val_percent_check will be overwritten by overfit_pct if `overfit_pct > 0`
``` {.python}
# DEFAULT
trainer = Trainer(val_percent_check=1.0)
# check 10% only
trainer = Trainer(val_percent_check=0.1)
```
---
#### Set how much of the test set to check
If you don't want to check 100% of the test set (for debugging or if it's huge), set this flag
test_percent_check will be overwritten by overfit_pct if `overfit_pct > 0`
``` {.python}
# DEFAULT
trainer = Trainer(test_percent_check=1.0)
# check 10% only
trainer = Trainer(test_percent_check=0.1)
```
---
#### Set validation check frequency within 1 training epoch
For large datasets it's often desirable to check validation multiple times within a training loop
``` {.python}
# DEFAULT
trainer = Trainer(val_check_interval=0.95)
# check every .25 of an epoch
trainer = Trainer(val_check_interval=0.25)
```
---
#### Set the number of validation sanity steps
Lightning runs a few steps of validation in the beginning of training. This avoids crashing in the validation loop sometime deep into a lengthy training loop.
``` {.python}
# DEFAULT
trainer = Trainer(nb_sanity_val_steps=5)
```
You can use `Trainer(nb_sanity_val_steps=0)` to skip the sanity check.
+51
View File
@@ -0,0 +1,51 @@
These flags are useful to help debug a model.
---
#### Fast dev run
This flag is meant for debugging a full train/val/test loop. It'll activate callbacks, everything but only with 1 training and 1 validation batch.
Use this to debug a full run of your program quickly
``` {.python}
# DEFAULT
trainer = Trainer(fast_dev_run=False)
```
---
#### Inspect gradient norms
Looking at grad norms can help you figure out where training might be going wrong.
``` {.python}
# DEFAULT (-1 doesn't track norms)
trainer = Trainer(track_grad_norm=-1)
# track the LP norm (P=2 here)
trainer = Trainer(track_grad_norm=2)
```
---
#### Make model overfit on subset of data
A useful debugging trick is to make your model overfit a tiny fraction of the data.
setting `overfit_pct > 0` will overwrite train_percent_check, val_percent_check, test_percent_check
``` {.python}
# DEFAULT don't overfit (ie: normal training)
trainer = Trainer(overfit_pct=0.0)
# overfit on 1% of data
trainer = Trainer(overfit_pct=0.01)
```
---
#### Print the parameter count by layer
By default lightning prints a list of parameters *and submodules* when it starts training.
---
#### Print which gradients are nan
This option prints a list of tensors with nan gradients.
``` {.python}
# DEFAULT
trainer = Trainer(print_nan_grads=False)
```
---
#### Log GPU usage
Lightning automatically logs gpu usage to the test tube logs. It'll only do it at the metric logging interval, so it doesn't slow down training.
+141
View File
@@ -0,0 +1,141 @@
# Hooks
[[Github Code](https://github.com/williamFalcon/pytorch-lightning/blob/master/pytorch_lightning/root_module/hooks.py)]
There are cases when you might want to do something different at different parts of the training/validation loop.
To enable a hook, simply override the method in your LightningModule and the trainer will call it at the correct time.
**Contributing** If there's a hook you'd like to add, simply:
1. Fork PyTorchLightning.
2. Add the hook [here](https://github.com/williamFalcon/pytorch-lightning/blob/master/pytorch_lightning/root_module/hooks.py).
3. Add the correct place in the [Trainer](https://github.com/williamFalcon/pytorch-lightning/blob/master/pytorch_lightning/models/trainer.py) where it should be called.
---
#### on_epoch_start
Called in the training loop at the very beginning of the epoch.
```python
def on_epoch_start(self):
# do something when the epoch starts
```
---
#### on_epoch_end
Called in the training loop at the very end of the epoch.
```python
def on_epoch_end(self):
# do something when the epoch ends
```
---
#### on_batch_start
Called in the training loop before anything happens for that batch.
```python
def on_batch_start(self):
# do something when the batch starts
```
---
#### on_batch_end
Called in the training loop after the batch.
```python
def on_batch_end(self):
# do something when the batch ends
```
---
#### on_pre_performance_check
Called at the very beginning of the validation loop.
```python
def on_pre_performance_check(self):
# do something before validation starts
```
---
#### on_post_performance_check
Called at the very end of the validation loop.
```python
def on_post_performance_check(self):
# do something before validation end
```
---
#### on_tng_metrics
Called in the training loop, right before metrics are logged.
Although you can log at any time by using self.experiment, you can use
this callback to modify what will be logged.
```python
def on_tng_metrics(self, metrics):
# do something before validation end
```
---
#### optimizer_step
Calls .step() and .zero_grad for each optimizer.
You can override this method to adjust how you do the optimizer step for each optimizer
Called once per optimizer
```python
# DEFAULT
def optimizer_step(self, current_epoch, batch_nb, optimizer, optimizer_i):
optimizer.step()
optimizer.zero_grad()
# Alternating schedule for optimizer steps (ie: GANs)
def optimizer_step(self, current_epoch, batch_nb, optimizer, optimizer_i):
# update generator opt every 2 steps
if optimizer_i == 0:
if batch_nb % 2 == 0 :
optimizer.step()
optimizer.zero_grad()
# update discriminator opt every 4 steps
if optimizer_i == 1:
if batch_nb % 4 == 0 :
optimizer.step()
optimizer.zero_grad()
# ...
# add as many optimizers as you want
```
This step allows you to do a lot of non-standard training tricks such as learning-rate warm-up:
```python
# learning rate warm-up
def optimizer_step(self, current_epoch, batch_nb, optimizer, optimizer_i):
# warm up lr
if self.trainer.global_step < 500:
lr_scale = min(1., float(self.trainer.global_step + 1) / 500.)
for pg in optimizer.param_groups:
pg['lr'] = lr_scale * self.hparams.learning_rate
# update params
optimizer.step()
optimizer.zero_grad()
```
---
#### on_before_zero_grad
Called in the training loop after taking an optimizer step and before zeroing grads.
Good place to inspect weight information with weights updated.
Called once per optimizer
```python
def on_before_zero_grad(self, optimizer):
# do something with the optimizer or inspect it.
```
---
#### on_after_backward
Called in the training loop after model.backward()
This is the ideal place to inspect or log gradient information
```python
def on_after_backward(self):
# example to inspect gradient information in tensorboard
if self.trainer.global_step % 25 == 0: # don't make the tf file huge
params = self.state_dict()
for k, v in params.items():
grads = v
name = k
self.experiment.add_histogram(tag=name, values=grads, global_step=self.trainer.global_step)
```
+80
View File
@@ -0,0 +1,80 @@
# Trainer
[[Github Code](https://github.com/williamFalcon/pytorch-lightning/blob/master/pytorch_lightning/models/trainer.py)]
The lightning trainer abstracts best practices for running a training, val, test routine. It calls parts of your model when it wants to hand over full control and otherwise makes training assumptions which are now standard practice in AI research.
This is the basic use of the trainer:
``` {.python}
from pytorch_lightning import Trainer
model = LightningTemplate()
trainer = Trainer()
trainer.fit(model)
```
But of course the fun is in all the advanced things it can do:
**Checkpointing**
- [Model saving](https://williamfalcon.github.io/pytorch-lightning/Trainer/Checkpointing/#model-saving)
- [Model loading](https://williamfalcon.github.io/pytorch-lightning/LightningModule/methods/#load-from-metrics)
- [Restoring training session](https://williamfalcon.github.io/pytorch-lightning/Trainer/Checkpointing/#restoring-training-session)
**Computing cluster (SLURM)**
- [Running grid search on a cluster](https://williamfalcon.github.io/pytorch-lightning/Trainer/SLURM%20Managed%20Cluster#running-grid-search-on-a-cluster)
- [Walltime auto-resubmit](https://williamfalcon.github.io/pytorch-lightning/Trainer/SLURM%20Managed%20Cluster#walltime-auto-resubmit)
**Debugging**
- [Fast dev run](https://williamfalcon.github.io/pytorch-lightning/Trainer/debugging/#fast-dev-run)
- [Inspect gradient norms](https://williamfalcon.github.io/pytorch-lightning/Trainer/debugging/#inspect-gradient-norms)
- [Log GPU usage](https://williamfalcon.github.io/pytorch-lightning/Trainer/debugging/#Log-gpu-usage)
- [Make model overfit on subset of data](https://williamfalcon.github.io/pytorch-lightning/Trainer/debugging/#make-model-overfit-on-subset-of-data)
- [Print the parameter count by layer](https://williamfalcon.github.io/pytorch-lightning/Trainer/debugging/#print-the-parameter-count-by-layer)
- [Pring which gradients are nan](https://williamfalcon.github.io/pytorch-lightning/Trainer/debugging/#print-which-gradients-are-nan)
- [Print input and output size of every module in system](https://williamfalcon.github.io/pytorch-lightning/LightningModule/properties/#example_input_array)
**Distributed training**
- [16-bit mixed precision](https://williamfalcon.github.io/pytorch-lightning/Trainer/Distributed%20training/#16-bit-mixed-precision)
- [Multi-GPU](https://williamfalcon.github.io/pytorch-lightning/Trainer/Distributed%20training/#Multi-GPU)
- [Multi-node](https://williamfalcon.github.io/pytorch-lightning/Trainer/Distributed%20training/#Multi-node)
- [Single GPU](https://williamfalcon.github.io/pytorch-lightning/Trainer/Distributed%20training/#single-gpu)
- [Self-balancing architecture](https://williamfalcon.github.io/pytorch-lightning/Trainer/Distributed%20training/#self-balancing-architecture)
**Experiment Logging**
- [Display metrics in progress bar](https://williamfalcon.github.io/pytorch-lightning/Trainer/Logging/#display-metrics-in-progress-bar)
- [Log metric row every k batches](https://williamfalcon.github.io/pytorch-lightning/Trainer/Logging/#log-metric-row-every-k-batches)
- [Process position](https://williamfalcon.github.io/pytorch-lightning/Trainer/Logging/#process-position)
- [Tensorboard support](https://williamfalcon.github.io/pytorch-lightning/Trainer/Logging/#tensorboard-support)
- [Save a snapshot of all hyperparameters](https://williamfalcon.github.io/pytorch-lightning/Trainer/Logging/#save-a-snapshot-of-all-hyperparameters)
- [Snapshot code for a training run](https://williamfalcon.github.io/pytorch-lightning/Trainer/Logging/#snapshot-code-for-a-training-run)
- [Write logs file to csv every k batches](https://williamfalcon.github.io/pytorch-lightning/Trainer/Logging/#write-logs-file-to-csv-every-k-batches)
**Training loop**
- [Accumulate gradients](https://williamfalcon.github.io/pytorch-lightning/Trainer/Training%20Loop/#accumulated-gradients)
- [Force training for min or max epochs](https://williamfalcon.github.io/pytorch-lightning/Trainer/Training%20Loop/#force-training-for-min-or-max-epochs)
- [Force disable early stop](https://williamfalcon.github.io/pytorch-lightning/Trainer/Training%20Loop/#force-disable-early-stop)
- [Gradient Clipping](https://williamfalcon.github.io/pytorch-lightning/Trainer/Training%20Loop/#gradient-clipping)
- [Hooks](https://williamfalcon.github.io/pytorch-lightning/Trainer/hooks/)
- [Learning rate scheduling](https://williamfalcon.github.io/pytorch-lightning/LightningModule/RequiredTrainerInterface/#configure_optimizers)
- [Use multiple optimizers (like GANs)](https://williamfalcon.github.io/pytorch-lightning/LightningModule/RequiredTrainerInterface/#configure_optimizers)
- [Set how much of the training set to check (1-100%)](https://williamfalcon.github.io/pytorch-lightning/Trainer/Training%20Loop/#set-how-much-of-the-training-set-to-check)
- [Step optimizers at arbitrary intervals](https://williamfalcon.github.io/pytorch-lightning/Trainer/hooks/#optimizer_step)
**Validation loop**
- [Check validation every n epochs](https://williamfalcon.github.io/pytorch-lightning/Trainer/Validation%20loop/#check-validation-every-n-epochs)
- [Hooks](https://williamfalcon.github.io/pytorch-lightning/Trainer/hooks/)
- [Set how much of the validation set to check](https://williamfalcon.github.io/pytorch-lightning/Trainer/Validation%20loop/#set-how-much-of-the-validation-set-to-check)
- [Set how much of the test set to check](https://williamfalcon.github.io/pytorch-lightning/Trainer/Validation%20loop/#set-how-much-of-the-test-set-to-check)
- [Set validation check frequency within 1 training epoch](https://williamfalcon.github.io/pytorch-lightning/Trainer/Validation%20loop/#set-validation-check-frequency-within-1-training-epoch)
- [Set the number of validation sanity steps](https://williamfalcon.github.io/pytorch-lightning/Trainer/Validation%20loop/#set-the-number-of-validation-sanity-steps)
+171
View File
@@ -0,0 +1,171 @@
### Template model definition
In 99% of cases you want to just copy [this template](https://github.com/williamFalcon/pytorch-lightning/blob/master/examples/new_project_templates/lightning_module_template.py) to start a new lightningModule and change the core of what your model is actually trying to do.
```bash
# get a copy of the module template
wget https://raw.githubusercontent.com/williamFalcon/pytorch-lightning/master/examples/new_project_templates/lightning_module_template.py
```
---
### Trainer Example
** \_\_main__ function**
Normally, we want to let the \_\_main__ function start the training.
Inside the main we parse training arguments with whatever hyperparameters we want. Your LightningModule will have a
chance to add hyperparameters.
```{.python}
from test_tube import HyperOptArgumentParser
if __name__ == '__main__':
# use default args given by lightning
root_dir = os.path.split(os.path.dirname(sys.modules['__main__'].__file__))[0]
parent_parser = HyperOptArgumentParser(strategy='random_search', add_help=False)
add_default_args(parent_parser, root_dir)
# allow model to overwrite or extend args
parser = ExampleModel.add_model_specific_args(parent_parser)
hyperparams = parser.parse_args()
# train model
main(hyperparams)
```
**Main Function**
The main function is your entry into the program. This is where you init your model, checkpoint directory, and launch the training.
The main function should have 3 arguments:
- hparams: a configuration of hyperparameters.
- slurm_manager: Slurm cluster manager object (can be None)
- dict: for you to return any values you want (useful in meta-learning, otherwise set to _)
```python
def main(hparams, cluster, results_dict):
"""
Main training routine specific for this project
:param hparams:
:return:
"""
# init experiment
log_dir = os.path.dirname(os.path.realpath(__file__))
exp = Experiment(
name='test_tube_exp',
debug=True,
save_dir=log_dir,
version=0,
autosave=False,
description='test demo'
)
# set the hparams for the experiment
exp.argparse(hparams)
exp.save()
# build model
model = MyLightningModule(hparams)
# callbacks
early_stop = EarlyStopping(
monitor=hparams.early_stop_metric,
patience=hparams.early_stop_patience,
verbose=True,
mode=hparams.early_stop_mode
)
model_save_path = '{}/{}/{}'.format(hparams.model_save_path, exp.name, exp.version)
checkpoint = ModelCheckpoint(
filepath=model_save_path,
save_function=None,
save_best_only=True,
verbose=True,
monitor=hparams.model_save_monitor_value,
mode=hparams.model_save_monitor_mode
)
# configure trainer
trainer = Trainer(
experiment=exp,
cluster=cluster,
checkpoint_callback=checkpoint,
early_stop_callback=early_stop,
)
# train model
trainer.fit(model)
```
The __main__ function will start training on your **main** function. If you use the HyperParameterOptimizer
in hyper parameter optimization mode, this main function will get one set of hyperparameters. If you use it as a simple
argument parser you get the default arguments in the argument parser.
So, calling main(hyperparams) runs the model with the default argparse arguments.
```{.python}
main(hyperparams)
```
---
#### CPU hyperparameter search
```{.python}
# run a grid search over 20 hyperparameter combinations.
hyperparams.optimize_parallel_cpu(
main_local,
nb_trials=20,
nb_workers=1
)
```
---
#### Hyperparameter search on a single or multiple GPUs
```{.python}
# run a grid search over 20 hyperparameter combinations.
hyperparams.optimize_parallel_gpu(
main_local,
nb_trials=20,
nb_workers=1,
gpus=[0,1,2,3]
)
```
---
#### Hyperparameter search on a SLURM HPC cluster
```{.python}
def optimize_on_cluster(hyperparams):
# enable cluster training
cluster = SlurmCluster(
hyperparam_optimizer=hyperparams,
log_path=hyperparams.tt_save_path,
test_tube_exp_name=hyperparams.tt_name
)
# email for cluster coms
cluster.notify_job_status(email='add_email_here', on_done=True, on_fail=True)
# configure cluster
cluster.per_experiment_nb_gpus = hyperparams.per_experiment_nb_gpus
cluster.job_time = '48:00:00'
cluster.gpu_type = '1080ti'
cluster.memory_mb_per_node = 48000
# any modules for code to run in env
cluster.add_command('source activate pytorch_lightning')
# name of exp
job_display_name = hyperparams.tt_name.split('_')[0]
job_display_name = job_display_name[0:3]
# run hopt
print('submitting jobs...')
cluster.optimize_parallel_cluster_gpu(
main,
nb_trials=hyperparams.nb_hopt_trials,
job_name=job_display_name
)
# run cluster hyperparameter search
optimize_on_cluster(hyperparams)
```
+139
View File
@@ -0,0 +1,139 @@
###### New project Quick Start
To start a new project define two files, a LightningModule and a Trainer file.
To illustrate Lightning power and simplicity, here's an example of a typical research flow.
###### Case 1: BERT
Let's say you're working on something like BERT but want to try different ways of training or even different networks.
You would define a single LightningModule and use flags to switch between your different ideas.
```python
class BERT(pl.LightningModule):
def __init__(self, model_name, task):
self.task = task
if model_name == 'transformer':
self.net = Transformer()
elif model_name == 'my_cool_version':
self.net = MyCoolVersion()
def training_step(self, batch, batch_nb):
if self.task == 'standard_bert':
# do standard bert training with self.net...
# return loss
if self.task == 'my_cool_task':
# do my own version with self.net
# return loss
```
###### Case 2: COOLER NOT BERT
But if you wanted to try something **completely** different, you'd define a new module for that.
```python
class CoolerNotBERT(pl.LightningModule):
def __init__(self):
self.net = ...
def training_step(self, batch, batch_nb):
# do some other cool task
# return loss
```
###### Rapid research flow
Then you could do rapid research by switching between these two and using the same trainer.
```python
if use_bert:
model = BERT()
else:
model = CoolerNotBERT()
trainer = Trainer(gpus=[0, 1, 2, 3], use_amp=True)
trainer.fit(model)
```
Notice a few things about this flow:
1. You're writing pure PyTorch... no unnecessary abstractions or new libraries to learn.
2. You get free GPU and 16-bit support without writing any of that code in your model.
3. You also get all of the capabilities below (without coding or testing yourself).
---
###### Templates
1. [MNIST LightningModule](https://williamfalcon.github.io/pytorch-lightning/LightningModule/RequiredTrainerInterface/#minimal-example)
2. [Trainer](https://williamfalcon.github.io/pytorch-lightning/Trainer/)
- [Basic CPU Trainer Template](https://github.com/williamFalcon/pytorch-lightning/blob/master/examples/new_project_templates/single_cpu_template.py)
- [Multi-GPU Trainer Template](https://github.com/williamFalcon/pytorch-lightning/blob/master/examples/new_project_templates/single_gpu_node_template.py)
- [GPU cluster Trainer Template](https://github.com/williamFalcon/pytorch-lightning/blob/master/examples/new_project_templates/multi_node_cluster_template.py)
###### Docs shortcuts
- [LightningModule](LightningModule/RequiredTrainerInterface/)
- [Trainer](Trainer/)
###### Quick start examples
- [CPU example](examples/Examples/#cpu-hyperparameter-search)
- [Hyperparameter search on single GPU](examples/Examples/#hyperparameter-search-on-a-single-or-multiple-gpus)
- [Hyperparameter search on multiple GPUs on same node](examples/Examples/#hyperparameter-search-on-a-single-or-multiple-gpus)
- [Hyperparameter search on a SLURM HPC cluster](examples/Examples/#Hyperparameter search on a SLURM HPC cluster)
###### Checkpointing
- [Model saving](https://williamfalcon.github.io/pytorch-lightning/Trainer/Checkpointing/#model-saving)
- [Model loading](https://williamfalcon.github.io/pytorch-lightning/LightningModule/methods/#load-from-metrics)
- [Restoring training session](https://williamfalcon.github.io/pytorch-lightning/Trainer/Checkpointing/#restoring-training-session)
###### Computing cluster (SLURM)
- [Running grid search on a cluster](https://williamfalcon.github.io/pytorch-lightning/Trainer/SLURM%20Managed%20Cluster#running-grid-search-on-a-cluster)
- [Walltime auto-resubmit](https://williamfalcon.github.io/pytorch-lightning/Trainer/SLURM%20Managed%20Cluster#walltime-auto-resubmit)
###### Debugging
- [Fast dev run](https://williamfalcon.github.io/pytorch-lightning/Trainer/debugging/#fast-dev-run)
- [Inspect gradient norms](https://williamfalcon.github.io/pytorch-lightning/Trainer/debugging/#inspect-gradient-norms)
- [Log GPU usage](https://williamfalcon.github.io/pytorch-lightning/Trainer/debugging/#Log-gpu-usage)
- [Make model overfit on subset of data](https://williamfalcon.github.io/pytorch-lightning/Trainer/debugging/#make-model-overfit-on-subset-of-data)
- [Print the parameter count by layer](https://williamfalcon.github.io/pytorch-lightning/Trainer/debugging/#print-the-parameter-count-by-layer)
- [Pring which gradients are nan](https://williamfalcon.github.io/pytorch-lightning/Trainer/debugging/#print-which-gradients-are-nan)
- [Print input and output size of every module in system](https://williamfalcon.github.io/pytorch-lightning/LightningModule/properties/#example_input_array)
###### Distributed training
- [16-bit mixed precision](https://williamfalcon.github.io/pytorch-lightning/Trainer/Distributed%20training/#16-bit-mixed-precision)
- [Multi-GPU](https://williamfalcon.github.io/pytorch-lightning/Trainer/Distributed%20training/#Multi-GPU)
- [Multi-node](https://williamfalcon.github.io/pytorch-lightning/Trainer/Distributed%20training/#Multi-node)
- [Single GPU](https://williamfalcon.github.io/pytorch-lightning/Trainer/Distributed%20training/#single-gpu)
- [Self-balancing architecture](https://williamfalcon.github.io/pytorch-lightning/Trainer/Distributed%20training/#self-balancing-architecture)
###### Experiment Logging
- [Display metrics in progress bar](https://williamfalcon.github.io/pytorch-lightning/Trainer/Logging/#display-metrics-in-progress-bar)
- [Log metric row every k batches](https://williamfalcon.github.io/pytorch-lightning/Trainer/Logging/#log-metric-row-every-k-batches)
- [Process position](https://williamfalcon.github.io/pytorch-lightning/Trainer/Logging/#process-position)
- [Tensorboard support](https://williamfalcon.github.io/pytorch-lightning/Trainer/Logging/#tensorboard-support)
- [Save a snapshot of all hyperparameters](https://williamfalcon.github.io/pytorch-lightning/Trainer/Logging/#save-a-snapshot-of-all-hyperparameters)
- [Snapshot code for a training run](https://williamfalcon.github.io/pytorch-lightning/Trainer/Logging/#snapshot-code-for-a-training-run)
- [Write logs file to csv every k batches](https://williamfalcon.github.io/pytorch-lightning/Trainer/Logging/#write-logs-file-to-csv-every-k-batches)
###### Training loop
- [Accumulate gradients](https://williamfalcon.github.io/pytorch-lightning/Trainer/Training%20Loop/#accumulated-gradients)
- [Force training for min or max epochs](https://williamfalcon.github.io/pytorch-lightning/Trainer/Training%20Loop/#force-training-for-min-or-max-epochs)
- [Force disable early stop](https://williamfalcon.github.io/pytorch-lightning/Trainer/Training%20Loop/#force-disable-early-stop)
- [Gradient Clipping](https://williamfalcon.github.io/pytorch-lightning/Trainer/Training%20Loop/#gradient-clipping)
- [Hooks](https://williamfalcon.github.io/pytorch-lightning/Trainer/hooks/)
- [Learning rate scheduling](https://williamfalcon.github.io/pytorch-lightning/LightningModule/RequiredTrainerInterface/#configure_optimizers)
- [Use multiple optimizers (like GANs)](https://williamfalcon.github.io/pytorch-lightning/LightningModule/RequiredTrainerInterface/#configure_optimizers)
- [Set how much of the training set to check (1-100%)](https://williamfalcon.github.io/pytorch-lightning/Trainer/Training%20Loop/#set-how-much-of-the-training-set-to-check)
- [Step optimizers at arbitrary intervals](https://williamfalcon.github.io/pytorch-lightning/Trainer/hooks/#optimizer_step)
###### Validation loop
- [Check validation every n epochs](https://williamfalcon.github.io/pytorch-lightning/Trainer/Validation%20loop/#check-validation-every-n-epochs)
- [Hooks](https://williamfalcon.github.io/pytorch-lightning/Trainer/hooks/)
- [Set how much of the validation set to check](https://williamfalcon.github.io/pytorch-lightning/Trainer/Validation%20loop/#set-how-much-of-the-validation-set-to-check)
- [Set how much of the test set to check](https://williamfalcon.github.io/pytorch-lightning/Trainer/Validation%20loop/#set-how-much-of-the-test-set-to-check)
- [Set validation check frequency within 1 training epoch](https://williamfalcon.github.io/pytorch-lightning/Trainer/Validation%20loop/#set-validation-check-frequency-within-1-training-epoch)
- [Set the number of validation sanity steps](https://williamfalcon.github.io/pytorch-lightning/Trainer/Validation%20loop/#set-the-number-of-validation-sanity-steps)
-35
View File
@@ -1,35 +0,0 @@
@ECHO OFF
pushd %~dp0
REM Command file for Sphinx documentation
if "%SPHINXBUILD%" == "" (
set SPHINXBUILD=sphinx-build
)
set SOURCEDIR=source
set BUILDDIR=build
if "%1" == "" goto help
%SPHINXBUILD% >NUL 2>NUL
if errorlevel 9009 (
echo.
echo.The 'sphinx-build' command was not found. Make sure you have Sphinx
echo.installed, then set the SPHINXBUILD environment variable to point
echo.to the full path of the 'sphinx-build' executable. Alternatively you
echo.may add the Sphinx directory to PATH.
echo.
echo.If you don't have Sphinx installed, grab it from
echo.http://sphinx-doc.org/
exit /b 1
)
%SPHINXBUILD% -M %1 %SOURCEDIR% %BUILDDIR% %SPHINXOPTS%
goto end
:help
%SPHINXBUILD% -M help %SOURCEDIR% %BUILDDIR% %SPHINXOPTS%
:end
popd
+2 -9
View File
@@ -1,9 +1,2 @@
sphinx>=1.8.3 mkdocs-material==4.4.0
recommonmark # fails with badges mkdocs==1.0.4
m2r # fails with multi-line text
nbsphinx
pandoc
docutils
git+https://github.com/PytorchLightning/lightning_sphinx_theme.git
sphinxcontrib-fulltoc
sphinxcontrib-mockautodoc

Before

Width:  |  Height:  |  Size: 901 B

After

Width:  |  Height:  |  Size: 901 B

@@ -1,62 +0,0 @@
<?xml version="1.0" encoding="UTF-8" standalone="no"?>
<svg
xmlns:dc="http://purl.org/dc/elements/1.1/"
xmlns:cc="http://creativecommons.org/ns#"
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
xmlns:svg="http://www.w3.org/2000/svg"
xmlns="http://www.w3.org/2000/svg"
xmlns:sodipodi="http://sodipodi.sourceforge.net/DTD/sodipodi-0.dtd"
xmlns:inkscape="http://www.inkscape.org/namespaces/inkscape"
id="svg"
version="1.1"
width="16.000004"
height="15.999986"
viewBox="0 0 16.000004 15.999986"
sodipodi:docname="lightning_icon.svg"
inkscape:version="0.92.3 (2405546, 2018-03-11)">
<metadata
id="metadata13">
<rdf:RDF>
<cc:Work
rdf:about="">
<dc:format>image/svg+xml</dc:format>
<dc:type
rdf:resource="http://purl.org/dc/dcmitype/StillImage" />
<dc:title></dc:title>
</cc:Work>
</rdf:RDF>
</metadata>
<defs
id="defs11" />
<sodipodi:namedview
pagecolor="#ffffff"
bordercolor="#666666"
borderopacity="1"
objecttolerance="10"
gridtolerance="10"
guidetolerance="10"
inkscape:pageopacity="0"
inkscape:pageshadow="2"
inkscape:window-width="1920"
inkscape:window-height="1028"
id="namedview9"
showgrid="false"
inkscape:zoom="0.59"
inkscape:cx="-669.05062"
inkscape:cy="373.84245"
inkscape:window-x="0"
inkscape:window-y="0"
inkscape:window-maximized="1"
inkscape:current-layer="svg" />
<path
style="fill:#fbfbfb;fill-rule:evenodd;stroke:none;stroke-width:0.04002798"
inkscape:connector-curvature="0"
d="m 8.987101,1.723485 c -0.05588,0.03422 -4.121881,4.096544 -4.184645,4.180924 -0.02317,0.0311 -0.04587,0.06016 -0.05044,0.06456 -0.0087,0.0084 -0.07477,0.145063 -0.09679,0.20014 -0.05848,0.146583 -0.05804,0.44387 0.001,0.592413 0.08426,0.21243 0.08826,0.216754 1.576864,1.706274 0.779463,0.779947 1.41719,1.426877 1.41719,1.437604 0,0.0232 -0.253177,0.79848 -0.273873,0.838707 -0.0079,0.0153 -0.01433,0.04087 -0.01433,0.05684 0,0.01597 -0.0059,0.03587 -0.01313,0.04423 -0.0072,0.0084 -0.03678,0.09086 -0.06568,0.18333 -0.02893,0.09246 -0.05904,0.180647 -0.06693,0.195937 -0.0079,0.0153 -0.01437,0.04087 -0.01437,0.05684 0,0.01597 -0.0059,0.03586 -0.01313,0.04423 -0.0072,0.0084 -0.03679,0.09086 -0.06569,0.18333 -0.02893,0.09246 -0.05904,0.180643 -0.06693,0.195937 -0.0079,0.0153 -0.01437,0.04187 -0.01437,0.05908 0,0.0172 -0.0072,0.03574 -0.016,0.04119 -0.0088,0.0054 -0.016,0.02607 -0.016,0.04579 0,0.01973 -0.006,0.04271 -0.0134,0.05108 -0.0074,0.0084 -0.04439,0.112477 -0.08222,0.23136 -0.03787,0.118884 -0.151103,0.461124 -0.251693,0.760534 -0.489984,1.45874 -0.462444,1.36155 -0.413611,1.45938 0.06917,0.138657 0.23128,0.199741 0.358251,0.134974 0.07057,-0.03602 4.143298,-4.099985 4.245368,-4.236242 0.03382,-0.04515 0.09094,-0.165796 0.109916,-0.232123 0.0088,-0.03083 0.0243,-0.08498 0.03442,-0.120363 0.03346,-0.11668 0.0068,-0.361134 -0.0566,-0.520084 C 10.880518,9.229614 10.738898,9.079187 9.372744,7.714673 8.601524,6.944416 7.970523,6.302806 7.970523,6.288916 c 0,-0.01393 0.02817,-0.107833 0.0626,-0.208663 0.03442,-0.100834 0.07881,-0.237367 0.09859,-0.303414 0.0198,-0.06605 0.04207,-0.12693 0.04947,-0.135293 0.0074,-0.0084 0.0135,-0.03133 0.0135,-0.05108 0,-0.01973 0.0072,-0.04035 0.016,-0.04579 0.0088,-0.0054 0.016,-0.02707 0.016,-0.04803 0,-0.02097 0.0072,-0.04259 0.016,-0.04803 0.0088,-0.0054 0.016,-0.02707 0.016,-0.04803 0,-0.02097 0.0072,-0.04259 0.016,-0.04803 0.0088,-0.0054 0.016,-0.02707 0.016,-0.04803 0,-0.02097 0.0072,-0.04259 0.016,-0.04803 0.0088,-0.0054 0.016,-0.02707 0.016,-0.04803 0,-0.02097 0.0072,-0.04259 0.016,-0.04803 0.0088,-0.0054 0.016,-0.02707 0.016,-0.04803 0,-0.02097 0.0072,-0.04259 0.016,-0.04803 0.0088,-0.0054 0.016,-0.02707 0.016,-0.04803 0,-0.02097 0.0072,-0.04259 0.016,-0.04804 0.0088,-0.0054 0.016,-0.02707 0.016,-0.04803 0,-0.02097 0.0072,-0.04259 0.016,-0.04803 0.0088,-0.0054 0.016,-0.02707 0.016,-0.04803 0,-0.02097 0.0072,-0.04259 0.016,-0.04803 0.0088,-0.0054 0.016,-0.02707 0.016,-0.04803 0,-0.02097 0.0072,-0.04259 0.016,-0.04803 0.0088,-0.0054 0.016,-0.02707 0.016,-0.04803 0,-0.02097 0.0072,-0.04259 0.016,-0.04803 0.0088,-0.0054 0.016,-0.02707 0.016,-0.04803 0,-0.02097 0.0072,-0.04259 0.016,-0.04803 0.0088,-0.0054 0.016,-0.02707 0.016,-0.04803 0,-0.02097 0.0072,-0.04259 0.016,-0.04803 0.0088,-0.0054 0.016,-0.02707 0.016,-0.04803 0,-0.02097 0.0072,-0.04259 0.016,-0.04804 0.0088,-0.0054 0.016,-0.02707 0.016,-0.04803 0,-0.02097 0.0072,-0.04259 0.016,-0.04803 0.0088,-0.0054 0.016,-0.02397 0.016,-0.04119 0,-0.0172 0.0065,-0.04379 0.0144,-0.05908 0.0079,-0.0153 0.119204,-0.34484 0.247334,-0.73231 C 9.064507,2.979766 9.220177,2.513319 9.28226,2.330632 9.408267,1.960092 9.41367,1.921146 9.35255,1.826839 9.27225,1.703032 9.099973,1.654399 8.986893,1.723566"
id="path0" />
<path
style="fill:#540c8c;fill-rule:evenodd;stroke:none;stroke-width:0.04002798"
inkscape:connector-curvature="0"
d="m 0.07719102,0.01733399 c -0.02187,0.0111 -0.04875,0.03799 -0.05984,0.05984 -0.0161,0.03173 -0.01937,1.62421701 -0.01633,7.94479601 l 0.0038,7.905086 0.03647,0.03646 0.03646,0.03647 H 8.00241 15.927073 l 0.03646,-0.03647 0.03647,-0.03646 V 8.002393 0.07773399 l -0.03647,-0.03646 -0.03646,-0.03647 -7.905086,-0.0038 c -6.320579,-0.003 -7.91305298,2.4e-4 -7.94479598,0.01633 M 9.193764,1.668208 c 0.259903,0.09046 0.275193,0.212427 0.09363,0.74628 C 8.845834,3.776859 8.388843,5.102846 7.991127,6.302606 L 9.415644,7.72492 c 1.24415,1.242111 1.51682,1.523547 1.51682,1.565414 0,0.0051 0.0133,0.03987 0.02953,0.07718 0.12913,0.296607 0.0877,0.664983 -0.103314,0.91872 -0.141456,0.187933 -4.207341,4.228478 -4.273468,4.246848 -0.139417,0.03871 -0.248653,-0.006 -0.34324,-0.140417 -0.07665,-0.108996 -0.06985,-0.137256 0.287004,-1.194633 0.34663,-1.101761 0.75901,-2.243218 1.08916,-3.290661 0,-0.0078 -0.636164,-0.650377 -1.413707,-1.427921 C 4.877658,7.152643 4.728155,6.995813 4.673718,6.87361 4.661948,6.84718 4.645988,6.81305 4.638168,6.79776 4.630368,6.78246 4.624038,6.75689 4.624038,6.74092 c 0,-0.01597 -0.0076,-0.03659 -0.01687,-0.04587 -0.02253,-0.02253 -0.02253,-0.436904 0,-0.45944 0.0093,-0.0093 0.01687,-0.0327 0.01687,-0.05204 0,-0.0363 0.06917,-0.178363 0.130414,-0.267907 0.07965,-0.1164 4.221831,-4.237681 4.259458,-4.237921 0.02047,-1.2e-4 0.04803,-0.0072 0.06124,-0.01577 0.03147,-0.02033 0.04415,-0.01967 0.118603,0.0062"
id="path1"
sodipodi:nodetypes="ccscccccccccccscccccscccccccccsssscccc" />
</svg>

Before

Width:  |  Height:  |  Size: 6.4 KiB

@@ -1,61 +0,0 @@
<?xml version="1.0" encoding="UTF-8" standalone="no"?>
<svg
xmlns:dc="http://purl.org/dc/elements/1.1/"
xmlns:cc="http://creativecommons.org/ns#"
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
xmlns:svg="http://www.w3.org/2000/svg"
xmlns="http://www.w3.org/2000/svg"
xmlns:sodipodi="http://sodipodi.sourceforge.net/DTD/sodipodi-0.dtd"
xmlns:inkscape="http://www.inkscape.org/namespaces/inkscape"
id="svg"
version="1.1"
width="400"
height="400"
viewBox="0, 0, 400,400"
sodipodi:docname="lightning_logo.svg"
inkscape:version="0.92.3 (2405546, 2018-03-11)">
<metadata
id="metadata13">
<rdf:RDF>
<cc:Work
rdf:about="">
<dc:format>image/svg+xml</dc:format>
<dc:type
rdf:resource="http://purl.org/dc/dcmitype/StillImage" />
</cc:Work>
</rdf:RDF>
</metadata>
<defs
id="defs11" />
<sodipodi:namedview
pagecolor="#ffffff"
bordercolor="#666666"
borderopacity="1"
objecttolerance="10"
gridtolerance="10"
guidetolerance="10"
inkscape:pageopacity="0"
inkscape:pageshadow="2"
inkscape:window-width="1920"
inkscape:window-height="1028"
id="namedview9"
showgrid="false"
inkscape:zoom="9.44"
inkscape:cx="203.07907"
inkscape:cy="335.32491"
inkscape:window-x="0"
inkscape:window-y="0"
inkscape:window-maximized="1"
inkscape:current-layer="svg" />
<path
style="fill:#fbfbfb;fill-rule:evenodd;stroke:none"
inkscape:connector-curvature="0"
d="m 224.6,43.137 c -1.396,0.855 -102.975,102.342 -104.543,104.45 -0.579,0.777 -1.146,1.503 -1.26,1.613 -0.218,0.21 -1.868,3.624 -2.418,5 -1.461,3.662 -1.45,11.089 0.022,14.8 2.105,5.307 2.205,5.415 39.394,42.627 19.473,19.485 35.405,35.647 35.405,35.915 0,0.58 -6.325,19.948 -6.842,20.953 -0.197,0.382 -0.358,1.021 -0.358,1.42 0,0.399 -0.147,0.896 -0.328,1.105 -0.18,0.209 -0.919,2.27 -1.641,4.58 -0.723,2.31 -1.475,4.513 -1.672,4.895 -0.198,0.382 -0.359,1.021 -0.359,1.42 0,0.399 -0.147,0.896 -0.328,1.105 -0.18,0.209 -0.919,2.27 -1.641,4.58 -0.723,2.31 -1.475,4.513 -1.672,4.895 -0.198,0.382 -0.359,1.046 -0.359,1.476 0,0.43 -0.18,0.893 -0.4,1.029 -0.22,0.136 -0.4,0.651 -0.4,1.144 0,0.493 -0.151,1.067 -0.335,1.276 -0.184,0.209 -1.109,2.81 -2.054,5.78 -0.946,2.97 -3.775,11.52 -6.288,19 -12.241,36.443 -11.553,34.015 -10.333,36.459 1.728,3.464 5.778,4.99 8.95,3.372 1.763,-0.9 103.51,-102.428 106.06,-105.832 0.845,-1.128 2.272,-4.142 2.746,-5.799 0.22,-0.77 0.607,-2.123 0.86,-3.007 0.836,-2.915 0.171,-9.022 -1.414,-12.993 -1.493,-3.741 -5.031,-7.499 -39.161,-41.588 C 214.964,173.569 199.2,157.54 199.2,157.193 c 0,-0.348 0.704,-2.694 1.564,-5.213 0.86,-2.519 1.969,-5.93 2.463,-7.58 0.495,-1.65 1.051,-3.171 1.236,-3.38 0.186,-0.209 0.337,-0.783 0.337,-1.276 0,-0.493 0.18,-1.008 0.4,-1.144 0.22,-0.136 0.4,-0.676 0.4,-1.2 0,-0.524 0.18,-1.064 0.4,-1.2 0.22,-0.136 0.4,-0.676 0.4,-1.2 0,-0.524 0.18,-1.064 0.4,-1.2 0.22,-0.136 0.4,-0.676 0.4,-1.2 0,-0.524 0.18,-1.064 0.4,-1.2 0.22,-0.136 0.4,-0.676 0.4,-1.2 0,-0.524 0.18,-1.064 0.4,-1.2 0.22,-0.136 0.4,-0.676 0.4,-1.2 0,-0.524 0.18,-1.064 0.4,-1.2 0.22,-0.136 0.4,-0.676 0.4,-1.2 0,-0.524 0.18,-1.064 0.4,-1.2 0.22,-0.136 0.4,-0.676 0.4,-1.2 0,-0.524 0.18,-1.064 0.4,-1.2 0.22,-0.136 0.4,-0.676 0.4,-1.2 0,-0.524 0.18,-1.064 0.4,-1.2 0.22,-0.136 0.4,-0.676 0.4,-1.2 0,-0.524 0.18,-1.064 0.4,-1.2 0.22,-0.136 0.4,-0.676 0.4,-1.2 0,-0.524 0.18,-1.064 0.4,-1.2 0.22,-0.136 0.4,-0.676 0.4,-1.2 0,-0.524 0.18,-1.064 0.4,-1.2 0.22,-0.136 0.4,-0.676 0.4,-1.2 0,-0.524 0.18,-1.064 0.4,-1.2 0.22,-0.136 0.4,-0.676 0.4,-1.2 0,-0.524 0.18,-1.064 0.4,-1.2 0.22,-0.136 0.4,-0.676 0.4,-1.2 0,-0.524 0.18,-1.064 0.4,-1.2 0.22,-0.136 0.4,-0.599 0.4,-1.029 0,-0.43 0.162,-1.094 0.36,-1.476 0.197,-0.382 2.978,-8.615 6.179,-18.295 3.2,-9.68 7.089,-21.333 8.64,-25.897 3.148,-9.257 3.283,-10.23 1.756,-12.586 -2.006,-3.093 -6.31,-4.308 -9.135,-2.58"
id="path0" />
<path
style="fill:#540c8c;fill-rule:evenodd;stroke:none"
inkscape:connector-curvature="0"
d="M 2.008,0.513 C 1.462,0.79 0.79,1.462 0.513,2.008 0.111,2.801 0.029,42.585 0.105,200.489 L 0.2,397.978 1.111,398.889 2.022,399.8 H 200 397.978 l 0.911,-0.911 0.911,-0.911 V 200 2.022 L 398.889,1.111 397.978,0.2 200.489,0.105 C 42.585,0.029 2.801,0.111 2.008,0.513 m 227.755,41.243 c 6.493,2.26 6.875,5.307 2.339,18.644 -11.0313,34.035452 -22.44803,67.16196 -32.384,97.135 l 35.588,35.533 c 31.082,31.031 37.894,38.062 37.894,39.108 0,0.128 0.332,0.996 0.738,1.928 3.226,7.41 2.191,16.613 -2.581,22.952 -3.534,4.695 -105.11,105.638 -106.762,106.097 -3.483,0.967 -6.212,-0.15 -8.575,-3.508 -1.915,-2.723 -1.745,-3.429 7.17,-29.845 8.65971,-27.52475 18.96205,-56.04122 27.21,-82.209 0,-0.195 -15.893,-16.248 -35.318,-35.673 -33.146,-33.147 -36.881,-37.065 -38.241,-40.118 -0.294,-0.66 -0.693,-1.513 -0.888,-1.895 -0.194,-0.382 -0.353,-1.021 -0.353,-1.42 0,-0.399 -0.189,-0.914 -0.421,-1.146 -0.563,-0.563 -0.563,-10.915 0,-11.478 0.232,-0.232 0.421,-0.817 0.421,-1.3 0,-0.907 1.728,-4.456 3.258,-6.693 C 120.848,144.96 224.33,42 225.27,41.994 c 0.511,-0.003 1.2,-0.181 1.53,-0.394 0.786,-0.508 1.103,-0.491 2.963,0.156"
id="path1"
sodipodi:nodetypes="ccscccccccccccscccccscccccccccsssscccc" />
</svg>

Before

Width:  |  Height:  |  Size: 5.2 KiB

File diff suppressed because one or more lines are too long

Before

Width:  |  Height:  |  Size: 15 KiB

@@ -1,62 +0,0 @@
<?xml version="1.0" encoding="UTF-8" standalone="no"?>
<svg
xmlns:dc="http://purl.org/dc/elements/1.1/"
xmlns:cc="http://creativecommons.org/ns#"
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
xmlns:svg="http://www.w3.org/2000/svg"
xmlns="http://www.w3.org/2000/svg"
xmlns:sodipodi="http://sodipodi.sourceforge.net/DTD/sodipodi-0.dtd"
xmlns:inkscape="http://www.inkscape.org/namespaces/inkscape"
id="svg"
version="1.1"
width="47.999985"
height="47.999943"
viewBox="0 0 47.999985 47.999943"
sodipodi:docname="lightning_logo.svg"
inkscape:version="0.92.3 (2405546, 2018-03-11)">
<metadata
id="metadata13">
<rdf:RDF>
<cc:Work
rdf:about="">
<dc:format>image/svg+xml</dc:format>
<dc:type
rdf:resource="http://purl.org/dc/dcmitype/StillImage" />
<dc:title />
</cc:Work>
</rdf:RDF>
</metadata>
<defs
id="defs11" />
<sodipodi:namedview
pagecolor="#ffffff"
bordercolor="#666666"
borderopacity="1"
objecttolerance="10"
gridtolerance="10"
guidetolerance="10"
inkscape:pageopacity="0"
inkscape:pageshadow="2"
inkscape:window-width="1920"
inkscape:window-height="1028"
id="namedview9"
showgrid="false"
inkscape:zoom="0.59"
inkscape:cx="-347.96588"
inkscape:cy="389.84243"
inkscape:window-x="0"
inkscape:window-y="0"
inkscape:window-maximized="1"
inkscape:current-layer="svg" />
<path
style="fill:#fbfbfb;fill-rule:evenodd;stroke:none;stroke-width:0.12008391"
inkscape:connector-curvature="0"
d="m 26.961294,5.1704519 c -0.16764,0.10267 -12.36564,12.2896301 -12.55393,12.5427701 -0.0695,0.0933 -0.13762,0.18048 -0.15131,0.19369 -0.0262,0.0252 -0.22432,0.43519 -0.29036,0.60042 -0.17544,0.43975 -0.17412,1.33161 0.003,1.77724 0.25278,0.63729 0.26479,0.65026 4.73059,5.11882 2.33839,2.33984 4.25157,4.28063 4.25157,4.31281 0,0.0696 -0.75953,2.39544 -0.82162,2.51612 -0.0237,0.0459 -0.043,0.12261 -0.043,0.17052 0,0.0479 -0.0177,0.1076 -0.0394,0.13269 -0.0216,0.0251 -0.11035,0.27259 -0.19705,0.54999 -0.0868,0.27739 -0.17713,0.54194 -0.20078,0.58781 -0.0238,0.0459 -0.0431,0.1226 -0.0431,0.17052 0,0.0479 -0.0177,0.10759 -0.0394,0.13269 -0.0216,0.0251 -0.11036,0.27259 -0.19706,0.54999 -0.0868,0.27739 -0.17712,0.54193 -0.20078,0.58781 -0.0238,0.0459 -0.0431,0.1256 -0.0431,0.17724 0,0.0516 -0.0216,0.10723 -0.048,0.12357 -0.0264,0.0163 -0.048,0.0782 -0.048,0.13737 0,0.0592 -0.0181,0.12813 -0.0402,0.15323 -0.0221,0.0251 -0.13318,0.33743 -0.24666,0.69408 -0.1136,0.35665 -0.45331,1.38337 -0.75508,2.2816 -1.46995,4.37622 -1.38733,4.08465 -1.24083,4.37814 0.2075,0.41597 0.69384,0.59922 1.07475,0.40492 0.21171,-0.10807 12.42989,-12.29995 12.7361,-12.70872 0.10147,-0.13545 0.27283,-0.49739 0.32975,-0.69637 0.0264,-0.0925 0.0729,-0.25493 0.10327,-0.36109 0.10039,-0.35004 0.0205,-1.0834 -0.1698,-1.56025 -0.17928,-0.44923 -0.60414,-0.90051 -4.7026,-4.99405 -2.31366,-2.31077 -4.20666,-4.2356 -4.20666,-4.27727 0,-0.0418 0.0845,-0.3235 0.18781,-0.62599 0.10327,-0.3025 0.23644,-0.7121 0.29577,-0.91024 0.0594,-0.19814 0.1262,-0.38079 0.14842,-0.40588 0.0223,-0.0251 0.0405,-0.094 0.0405,-0.15323 0,-0.0592 0.0216,-0.12105 0.048,-0.13738 0.0264,-0.0163 0.048,-0.0812 0.048,-0.1441 0,-0.0629 0.0216,-0.12777 0.048,-0.1441 0.0264,-0.0163 0.048,-0.0812 0.048,-0.1441 0,-0.0629 0.0216,-0.12777 0.048,-0.1441 0.0264,-0.0163 0.048,-0.0812 0.048,-0.1441 0,-0.0629 0.0216,-0.12777 0.048,-0.1441 0.0264,-0.0163 0.048,-0.0812 0.048,-0.1441 0,-0.0629 0.0216,-0.12777 0.048,-0.1441 0.0264,-0.0163 0.048,-0.0812 0.048,-0.1441 0,-0.0629 0.0216,-0.12777 0.048,-0.1441 0.0264,-0.0163 0.048,-0.0812 0.048,-0.1441 0,-0.0629 0.0216,-0.12777 0.048,-0.14411 0.0264,-0.0163 0.048,-0.0812 0.048,-0.1441 0,-0.0629 0.0216,-0.12777 0.048,-0.1441 0.0264,-0.0163 0.048,-0.0812 0.048,-0.1441 0,-0.0629 0.0216,-0.12777 0.048,-0.1441 0.0264,-0.0163 0.048,-0.0812 0.048,-0.1441 0,-0.0629 0.0216,-0.12777 0.048,-0.1441 0.0264,-0.0163 0.048,-0.0812 0.048,-0.1441 0,-0.0629 0.0216,-0.12777 0.048,-0.1441 0.0264,-0.0163 0.048,-0.0812 0.048,-0.1441 0,-0.0629 0.0216,-0.12777 0.048,-0.1441 0.0264,-0.0163 0.048,-0.0812 0.048,-0.1441 0,-0.0629 0.0216,-0.12777 0.048,-0.1441 0.0264,-0.0163 0.048,-0.0812 0.048,-0.1441 0,-0.0629 0.0216,-0.12777 0.048,-0.14411 0.0264,-0.0163 0.048,-0.0812 0.048,-0.1441 0,-0.0629 0.0216,-0.12777 0.048,-0.1441 0.0264,-0.0163 0.048,-0.0719 0.048,-0.12356 0,-0.0516 0.0195,-0.13137 0.0432,-0.17725 0.0237,-0.0459 0.35761,-1.03452 0.742,-2.19693 0.38427,-1.1624101 0.85128,-2.5617501 1.03753,-3.1098101 0.37802,-1.11162 0.39423,-1.22846 0.21087,-1.51138 -0.24089,-0.37142 -0.75773,-0.51732 -1.09697,-0.30982"
id="path0" />
<path
style="fill:#540c8c;fill-rule:evenodd;stroke:none;stroke-width:0.12008391"
inkscape:connector-curvature="0"
d="m 0.2315739,0.05200186 c -0.0656,0.0333 -0.14626,0.11396 -0.17952,0.17952 -0.0483,0.0952 -0.0581,4.87265004 -0.049,23.83438014 l 0.0114,23.71525 0.1094,0.10939 0.10939,0.1094 h 23.7739701 23.77398 l 0.10939,-0.1094 0.1094,-0.10939 V 24.007172 0.23320186 l -0.1094,-0.10939 -0.10939,-0.1094 -23.71525,-0.0114 c -18.9617301,-0.009 -23.7391501,7.2e-4 -23.8343801,0.049 M 27.581274,5.0046319 c 0.77971,0.27139 0.82558,0.63728 0.28088,2.23884 -1.32468,4.0871101 -2.69565,8.0650701 -3.8888,11.6643501 l 4.27355,4.26694 c 3.73245,3.72633 4.55046,4.57064 4.55046,4.69624 0,0.0154 0.0399,0.11961 0.0886,0.23153 0.38739,0.88982 0.2631,1.99495 -0.30994,2.75616 -0.42437,0.5638 -12.62202,12.68543 -12.8204,12.74054 -0.41825,0.11613 -0.74596,-0.018 -1.02972,-0.42125 -0.22996,-0.32699 -0.20954,-0.41177 0.86101,-3.5839 1.03989,-3.30528 2.27703,-6.72965 3.26748,-9.87198 0,-0.0234 -1.90849,-1.95113 -4.24112,-4.28376 -3.98031,-3.98042 -4.42882,-4.45091 -4.59213,-4.81752 -0.0353,-0.0793 -0.0832,-0.18169 -0.10664,-0.22756 -0.0233,-0.0459 -0.0424,-0.12261 -0.0424,-0.17052 0,-0.0479 -0.0227,-0.10976 -0.0506,-0.13762 -0.0676,-0.0676 -0.0676,-1.31071 0,-1.37832 0.0279,-0.0279 0.0506,-0.0981 0.0506,-0.15611 0,-0.10891 0.20751,-0.53509 0.39124,-0.80372 0.23896,-0.3492 12.66549,-12.7130401 12.77837,-12.7137601 0.0614,-3.6e-4 0.1441,-0.0217 0.18372,-0.0473 0.0944,-0.061 0.13246,-0.059 0.35581,0.0187"
id="path1"
sodipodi:nodetypes="ccscccccccccccscccccscccccccccsssscccc" />
</svg>

Before

Width:  |  Height:  |  Size: 6.2 KiB

Binary file not shown.

Before

Width:  |  Height:  |  Size: 5.4 MiB

Binary file not shown.

After

Width:  |  Height:  |  Size: 11 KiB

Before

Width:  |  Height:  |  Size: 8.3 KiB

After

Width:  |  Height:  |  Size: 8.3 KiB

Binary file not shown.

After

Width:  |  Height:  |  Size: 2.6 KiB

Before

Width:  |  Height:  |  Size: 410 KiB

After

Width:  |  Height:  |  Size: 410 KiB

Before

Width:  |  Height:  |  Size: 219 KiB

After

Width:  |  Height:  |  Size: 219 KiB

Before

Width:  |  Height:  |  Size: 214 KiB

After

Width:  |  Height:  |  Size: 214 KiB

@@ -1,17 +0,0 @@
{%- set external_urls = {
'github': 'https://github.com/PytorchLightning/pytorch-lightning',
'github_issues': 'https://github.com/PytorchLightning/pytorch-lightning/issues',
'contributing': 'https://github.com/PytorchLightning/pytorch-lightning/blob/master/CONTRIBUTING.md',
'docs': 'https://pytorch-lightning.rtfd.io/en/latest',
'twitter': 'https://twitter.com/PyTorchLightnin',
'discuss': 'https://discuss.pytorch.org',
'tutorials': 'https://pytorch-lightning.rtfd.io/en/latest/',
'previous_pytorch_versions': 'https://pytorch-lightning.rtfd.io/en/latest/',
'home': 'https://pytorch-lightning.rtfd.io/en/latest/',
'get_started': 'https://pytorch-lightning.rtfd.io/en/latest/',
'features': 'https://pytorch-lightning.rtfd.io/en/latest/',
'blog': 'https://pytorch-lightning.rtfd.io/en/latest/',
'resources': 'https://pytorch-lightning.rtfd.io/en/latest/',
'support': 'https://pytorch-lightning.rtfd.io/en/latest/',
}
-%}
-14
View File
@@ -1,14 +0,0 @@
.. role:: hidden
:class: hidden-section
Callbacks
===========
.. automodule:: pytorch_lightning.callbacks
:exclude-members:
_del_model,
_save_model,
on_epoch_end,
on_train_end,
on_epoch_begin,
check_monitor_top_k,
on_train_begin,
-21
View File
@@ -1,21 +0,0 @@
Multi-gpu (same node) training
==============================
Multi-node training
====================
16-bit precision
=================
gradient clipping
=================
modifying training via hooks
=============================
.. toctree::
:maxdepth: 3
pl_examples
-350
View File
@@ -1,350 +0,0 @@
# -*- coding: utf-8 -*-
#
# Configuration file for the Sphinx documentation builder.
#
# This file does only contain a selection of the most common options. For a
# full list see the documentation:
# http://www.sphinx-doc.org/en/master/config
# -- Path setup --------------------------------------------------------------
# If extensions (or modules to document with autodoc) are in another directory,
# add these directories to sys.path here. If the directory is relative to the
# documentation root, use os.path.abspath to make it absolute, like shown here.
import os
import sys
import glob
import shutil
import inspect
# import m2r
import builtins
import pt_lightning_sphinx_theme
PATH_HERE = os.path.abspath(os.path.dirname(__file__))
PATH_ROOT = os.path.join(PATH_HERE, '..', '..')
sys.path.insert(0, os.path.abspath(PATH_ROOT))
builtins.__LIGHTNING_SETUP__ = True
import pytorch_lightning # noqa: E402
# -- Project documents -------------------------------------------------------
# # export the documentation
# with open('intro.rst', 'w') as fp:
# intro = pytorch_lightning.__doc__.replace(os.linesep + ' ', '')
# fp.write(m2r.convert(intro))
# # fp.write(pytorch_lightning.__doc__)
# # export the READme
# with open(os.path.join(PATH_ROOT, 'README.md'), 'r') as fp:
# readme = fp.read()
# # replace all paths to relative
# for ndir in (os.path.basename(p) for p in glob.glob(os.path.join(PATH_ROOT, '*'))
# if os.path.isdir(p)):
# readme = readme.replace('](%s/' % ndir, '](%s/%s/' % (PATH_ROOT, ndir))
# with open('readme.md', 'w') as fp:
# fp.write(readme)
for md in glob.glob(os.path.join(PATH_ROOT, '.github', '*.md')):
shutil.copy(md, os.path.join(PATH_HERE, os.path.basename(md)))
# -- Project information -----------------------------------------------------
project = 'PyTorch-Lightning'
copyright = pytorch_lightning.__copyright__
author = pytorch_lightning.__author__
# The short X.Y version
version = pytorch_lightning.__version__
# The full version, including alpha/beta/rc tags
release = pytorch_lightning.__version__
# -- General configuration ---------------------------------------------------
# If your documentation needs a minimal Sphinx version, state it here.
needs_sphinx = '1.4'
# Add any Sphinx extension module names here, as strings. They can be
# extensions coming with Sphinx (named 'sphinx.ext.*') or your custom
# ones.
extensions = [
'sphinx.ext.autodoc',
'sphinxcontrib.mockautodoc',
# 'sphinxcontrib.fulltoc', # breaks pytorch-theme with unexpected kw argument 'titles_only'
'sphinx.ext.doctest',
'sphinx.ext.intersphinx',
'sphinx.ext.todo',
'sphinx.ext.coverage',
'sphinx.ext.linkcode',
'sphinx.ext.autosummary',
'sphinx.ext.napoleon',
'recommonmark',
'sphinx.ext.autosectionlabel',
# 'm2r',
'nbsphinx',
]
# Add any paths that contain templates here, relative to this directory.
templates_path = ['_templates']
# https://berkeley-stat159-f17.github.io/stat159-f17/lectures/14-sphinx..html#conf.py-(cont.)
# https://stackoverflow.com/questions/38526888/embed-ipython-notebook-in-sphinx-document
# I execute the notebooks manually in advance. If notebooks test the code,
# they should be run at build time.
nbsphinx_execute = 'never'
nbsphinx_allow_errors = True
# The suffix(es) of source filenames.
# You can specify multiple suffix as a list of string:
#
# source_suffix = ['.rst', '.md']
# source_suffix = ['.rst', '.md', '.ipynb']
source_suffix = {
'.rst': 'restructuredtext',
'.txt': 'markdown',
'.md': 'markdown',
'.ipynb': 'nbsphinx',
}
# The master toctree document.
master_doc = 'index'
# The language for content autogenerated by Sphinx. Refer to documentation
# for a list of supported languages.
#
# This is also used if you do content translation via gettext catalogs.
# Usually you set "language" from the command line for these cases.
language = None
# List of patterns, relative to source directory, that match files and
# directories to ignore when looking for source files.
# This pattern also affects html_static_path and html_extra_path.
exclude_patterns = ['*.test_*']
# The name of the Pygments (syntax highlighting) style to use.
pygments_style = None
# -- Options for HTML output -------------------------------------------------
# The theme to use for HTML and HTML Help pages. See the documentation for
# a list of builtin themes.
# http://www.sphinx-doc.org/en/master/usage/theming.html#builtin-themes
# html_theme = 'bizstyle'
# https://sphinx-themes.org
html_theme = 'pt_lightning_sphinx_theme'
html_theme_path = [pt_lightning_sphinx_theme.get_html_theme_path()]
# Theme options are theme-specific and customize the look and feel of a theme
# further. For a list of options available for each theme, see the
# documentation.
html_theme_options = {
'pytorch_project': pytorch_lightning.__homepage__,
'canonical_url': pytorch_lightning.__homepage__,
'collapse_navigation': False,
'display_version': True,
'logo_only': False,
}
html_logo = '_static/images/lightning_logo-name.svg'
# Add any paths that contain custom static files (such as style sheets) here,
# relative to this directory. They are copied after the builtin static files,
# so a file named "default.css" will overwrite the builtin "default.css".
html_static_path = ['_static']
# Custom sidebar templates, must be a dictionary that maps document names
# to template names.
#
# The default sidebars (for documents that don't match any pattern) are
# defined by theme itself. Builtin themes are using these templates by
# default: ``['localtoc.html', 'relations.html', 'sourcelink.html',
# 'searchbox.html']``.
#
# html_sidebars = {}
# -- Options for HTMLHelp output ---------------------------------------------
# Output file base name for HTML help builder.
htmlhelp_basename = project + '-doc'
# -- Options for LaTeX output ------------------------------------------------
latex_elements = {
# The paper size ('letterpaper' or 'a4paper').
# 'papersize': 'letterpaper',
# The font size ('10pt', '11pt' or '12pt').
# 'pointsize': '10pt',
# Additional stuff for the LaTeX preamble.
# 'preamble': '',
# Latex figure (float) alignment
'figure_align': 'htbp',
}
# Grouping the document tree into LaTeX files. List of tuples
# (source start file, target name, title,
# author, documentclass [howto, manual, or own class]).
latex_documents = [
(master_doc, project + '.tex', project + ' Documentation', author, 'manual'),
]
# -- Options for manual page output ------------------------------------------
# One entry per manual page. List of tuples
# (source start file, name, description, authors, manual section).
man_pages = [
(master_doc, project, project + ' Documentation', [author], 1)
]
# -- Options for Texinfo output ----------------------------------------------
# Grouping the document tree into Texinfo files. List of tuples
# (source start file, target name, title, author,
# dir menu entry, description, category)
texinfo_documents = [
(master_doc, project, project + ' Documentation', author, project,
'One line description of project.', 'Miscellaneous'),
]
# -- Options for Epub output -------------------------------------------------
# Bibliographic Dublin Core info.
epub_title = project
# The unique identifier of the text. This can be a ISBN number
# or the project homepage.
#
# epub_identifier = ''
# A unique identification for the text.
#
# epub_uid = ''
# A list of files that should not be packed into the epub file.
epub_exclude_files = ['search.html']
# -- Extension configuration -------------------------------------------------
# -- Options for intersphinx extension ---------------------------------------
# Example configuration for intersphinx: refer to the Python standard library.
intersphinx_mapping = {'https://docs.python.org/': None}
# -- Options for todo extension ----------------------------------------------
# If true, `todo` and `todoList` produce output, else they produce nothing.
todo_include_todos = True
# https://github.com/rtfd/readthedocs.org/issues/1139
# I use sphinx-apidoc to auto-generate API documentation for my project.
# Right now I have to commit these auto-generated files to my repository
# so that RTD can build them into HTML docs. It'd be cool if RTD could run
# sphinx-apidoc for me, since it's easy to forget to regen API docs
# and commit them to my repo after making changes to my code.
PACKAGES = [
pytorch_lightning.__name__,
'pl_examples',
]
def run_apidoc(_):
for pkg in PACKAGES:
argv = ['-e', '-o', PATH_HERE, os.path.join(PATH_HERE, PATH_ROOT, pkg),
'**/test_*', '--force', '--private', '--module-first']
try:
# Sphinx 1.7+
from sphinx.ext import apidoc
apidoc.main(argv)
except ImportError:
# Sphinx 1.6 (and earlier)
from sphinx import apidoc
argv.insert(0, apidoc.__file__)
apidoc.main(argv)
def setup(app):
app.connect('builder-inited', run_apidoc)
# copy all notebooks to local folder
path_nbs = os.path.join(PATH_HERE, 'notebooks')
if not os.path.isdir(path_nbs):
os.mkdir(path_nbs)
for path_ipynb in glob.glob(os.path.join(PATH_ROOT, 'notebooks', '*.ipynb')):
path_ipynb2 = os.path.join(path_nbs, os.path.basename(path_ipynb))
shutil.copy(path_ipynb, path_ipynb2)
# Ignoring Third-party packages
# https://stackoverflow.com/questions/15889621/sphinx-how-to-exclude-imports-in-automodule
MOCK_REQUIRE_PACKAGES = []
with open(os.path.join(PATH_ROOT, 'requirements.txt'), 'r') as fp:
for ln in fp.readlines():
found = [ln.index(ch) for ch in list(',=<>#') if ch in ln]
pkg = ln[:min(found)] if found else ln
if pkg.rstrip():
MOCK_REQUIRE_PACKAGES.append(pkg.rstrip())
# TODO: better parse from package since the import name and package name may differ
MOCK_MANUAL_PACKAGES = ['torch', 'torchvision', 'sklearn', 'test_tube', 'mlflow', 'comet_ml', 'wandb', 'neptune']
autodoc_mock_imports = MOCK_REQUIRE_PACKAGES + MOCK_MANUAL_PACKAGES
# for mod_name in MOCK_REQUIRE_PACKAGES:
# sys.modules[mod_name] = mock.Mock()
# Options for the linkcode extension
# ----------------------------------
github_user = 'PyTorchLightning'
github_repo = project
# Resolve function
# This function is used to populate the (source) links in the API
def linkcode_resolve(domain, info):
def find_source():
# try to find the file and line number, based on code from numpy:
# https://github.com/numpy/numpy/blob/master/doc/source/conf.py#L286
obj = sys.modules[info['module']]
for part in info['fullname'].split('.'):
obj = getattr(obj, part)
fname = inspect.getsourcefile(obj)
# https://github.com/rtfd/readthedocs.org/issues/5735
if any([s in fname for s in ('readthedocs', 'checkouts')]):
# /home/docs/checkouts/readthedocs.org/user_builds/pytorch_lightning/checkouts/
# devel/pytorch_lightning/utilities/cls_experiment.py#L26-L176
path_top = os.path.abspath(os.path.join('..', '..', '..'))
fname = os.path.relpath(fname, start=path_top)
else:
# Local build, imitate master
fname = 'master/' + os.path.relpath(fname, start=os.path.abspath('..'))
source, lineno = inspect.getsourcelines(obj)
return fname, lineno, lineno + len(source) - 1
if domain != 'py' or not info['module']:
return None
try:
filename = '%s#L%d-L%d' % find_source()
except Exception:
filename = info['module'].replace('.', '/') + '.py'
# import subprocess
# tag = subprocess.Popen(['git', 'rev-parse', 'HEAD'], stdout=subprocess.PIPE,
# universal_newlines=True).communicate()[0][:-1]
return "https://github.com/%s/%s/blob/%s" \
% (github_user, github_repo, filename)
autodoc_member_order = 'groupwise'
autoclass_content = 'both'
autodoc_default_flags = [
'members', 'undoc-members', 'show-inheritance', 'private-members',
# 'special-members', 'inherited-members'
]
-8
View File
@@ -1,8 +0,0 @@
Documentation
=============
.. toctree::
:maxdepth: 4
pytorch_lightning
-34
View File
@@ -1,34 +0,0 @@
GAN
====
.. toctree::
:maxdepth: 3
pl_examples.domain_templates.gan
MNIST
====
.. toctree::
:maxdepth: 3
pl_examples.basic_examples.lightning_module_template
Multi-node (ddp) MNIST
====
.. toctree::
:maxdepth: 3
pl_examples.multi_node_examples.multi_node_ddp_demo
Multi-node (ddp2) MNIST
====
.. toctree::
:maxdepth: 3
pl_examples.multi_node_examples.multi_node_ddp2_demo
Imagenet
====
.. toctree::
:maxdepth: 3
pl_examples.full_examples.imagenet.imagenet_example
-63
View File
@@ -1,63 +0,0 @@
.. PyTorch-Lightning documentation master file, created by
sphinx-quickstart on Fri Nov 15 07:48:22 2019.
You can adapt this file completely to your liking, but it should at least
contain the root `toctree` directive.
PyTorch-Lightning Documentation
=============================
.. toctree::
:maxdepth: 1
:name: start
:caption: Start Here
new-project
.. toctree::
:maxdepth: 4
:name: docs
:caption: Python API
callbacks
lightning-module
logging
trainer
.. toctree::
:maxdepth: 1
:name: Examples
:caption: Examples
examples
.. toctree::
:maxdepth: 1
:name: Tutorials
:caption: Tutorials
tutorials
.. toctree::
:maxdepth: 1
:name: Common Use Cases
:caption: Common Use Cases
common-cases
.. toctree::
:maxdepth: 1
:name: community
:caption: Community
CODE_OF_CONDUCT.md
CONTRIBUTING.md
BECOMING_A_CORE_CONTRIBUTOR.md
governance.md
Indices and tables
------------------
* :ref:`genindex`
* :ref:`modindex`
* :ref:`search`
-10
View File
@@ -1,10 +0,0 @@
.. role:: hidden
:class: hidden-section
LightningModule
===========
.. automodule:: pytorch_lightning.core
:exclude-members:
_abc_impl,
summarize,
-12
View File
@@ -1,12 +0,0 @@
.. role:: hidden
:class: hidden-section
Logging
===========
.. automodule:: pytorch_lightning.logging
:exclude-members:
_abc_impl,
_save_model,
on_epoch_end,
on_train_end,
on_epoch_begin,
-7
View File
@@ -1,7 +0,0 @@
pl_examples
===========
.. toctree::
:maxdepth: 4
pl_examples
-72
View File
@@ -1,72 +0,0 @@
Quick Start
===========
| To start a new project define two files, a LightningModule and a Trainer file.
| To illustrate the power of Lightning and its simplicity, here's an example of a typical research flow.
Case 1: BERT
------------
| Let's say you're working on something like BERT but want to try different ways of training or even different networks.
| You would define a single LightningModule and use flags to switch between your different ideas.
.. code-block:: python
class BERT(pl.LightningModule):
def __init__(self, model_name, task):
self.task = task
if model_name == 'transformer':
self.net = Transformer()
elif model_name == 'my_cool_version':
self.net = MyCoolVersion()
def training_step(self, batch, batch_idx):
if self.task == 'standard_bert':
# do standard bert training with self.net...
# return loss
if self.task == 'my_cool_task':
# do my own version with self.net
# return loss
Case 2: COOLER NOT BERT
-----------------------
But if you wanted to try something **completely** different, you'd define a new module for that.
.. code-block:: python
class CoolerNotBERT(pl.LightningModule):
def __init__(self):
self.net = ...
def training_step(self, batch, batch_idx):
# do some other cool task
# return loss
Rapid research flow
-------------------
Then you could do rapid research by switching between these two and using the same trainer.
.. code-block:: python
if use_bert:
model = BERT()
else:
model = CoolerNotBERT()
trainer = Trainer(gpus=4, use_amp=True)
trainer.fit(model)
**Notice a few things about this flow:**
1. You're writing pure PyTorch... no unnecessary abstractions or new libraries to learn.
2. You get free GPU and 16-bit support without writing any of that code in your model.
3. You also get early stopping, multi-gpu training, 16-bit and MUCH more without coding anything!
-21
View File
@@ -1,21 +0,0 @@
.. role:: hidden
:class: hidden-section
Trainer
===========
.. automodule:: pytorch_lightning.trainer
:members: fit, test
:exclude-members:
run_pretrain_routine,
_abc_impl,
_Trainer__set_root_gpu,
_Trainer__init_optimizers,
_Trainer__parse_gpu_ids,
_Trainer__configure_schedulers,
data_parallel,
num_gpus,
slurm_job_id,
tng_tqdm_dic,
training_tqdm_dict,
init_optimizers,
configure_schedulers
-20
View File
@@ -1,20 +0,0 @@
Refactoring PyTorch into Lightning
==================================
`Tutorial <https://towardsdatascience.com/how-to-refactor-your-pytorch-code-to-get-these-42-benefits-of-pytorch-lighting-6fdd0dc97538>`_
Start a research project
=========================
`Research seed <https://github.com/PytorchLightning/pytorch-lightning-conference-seed>`_
Basic Lightning use
====================
`Tutorial <https://towardsdatascience.com/supercharge-your-ai-research-with-pytorch-lightning-337948a99eec>`_
9 key Lightning tricks
========================
`Tutorial <9 key speed features in Pytorch-Lightning>`_
Multi-node training on SLURM
=============================
`Tutorial <https://towardsdatascience.com/trivial-multi-node-training-with-pytorch-lightning-ff75dfb809bd>`_
+5
View File
@@ -0,0 +1,5 @@
from .new_project_templates.lightning_module_template import LightningTemplateModel
__all__ = [
'LightningTemplateModel'
]
@@ -1,22 +1,20 @@
""" """
Example template for defining a system Example template for defining a system
""" """
import logging
import os import os
from argparse import ArgumentParser
from collections import OrderedDict from collections import OrderedDict
import torch
import torch.nn as nn import torch.nn as nn
import torch.nn.functional as F from torchvision.datasets import MNIST
import torchvision.transforms as transforms import torchvision.transforms as transforms
import torch
import torch.nn.functional as F
from test_tube import HyperOptArgumentParser
from torch import optim from torch import optim
from torch.utils.data import DataLoader from torch.utils.data import DataLoader
from torch.utils.data.distributed import DistributedSampler from torch.utils.data.distributed import DistributedSampler
from torchvision.datasets import MNIST
import pytorch_lightning as pl import pytorch_lightning as pl
from pytorch_lightning.core.lightning import LightningModule from pytorch_lightning.root_module.root_module import LightningModule
class LightningTemplateModel(LightningModule): class LightningTemplateModel(LightningModule):
@@ -81,14 +79,14 @@ class LightningTemplateModel(LightningModule):
nll = F.nll_loss(logits, labels) nll = F.nll_loss(logits, labels)
return nll return nll
def training_step(self, batch, batch_idx): def training_step(self, data_batch, batch_i):
""" """
Lightning calls this inside the training loop Lightning calls this inside the training loop
:param batch: :param data_batch:
:return: :return:
""" """
# forward pass # forward pass
x, y = batch x, y = data_batch
x = x.view(x.size(0), -1) x = x.view(x.size(0), -1)
y_hat = self.forward(x) y_hat = self.forward(x)
@@ -97,26 +95,23 @@ class LightningTemplateModel(LightningModule):
loss_val = self.loss(y, y_hat) loss_val = self.loss(y, y_hat)
# in DP mode (default) make sure if result is scalar, there's another dim in the beginning # in DP mode (default) make sure if result is scalar, there's another dim in the beginning
if self.trainer.use_dp or self.trainer.use_ddp2: if self.trainer.use_dp:
loss_val = loss_val.unsqueeze(0) loss_val = loss_val.unsqueeze(0)
tqdm_dict = {'train_loss': loss_val}
output = OrderedDict({ output = OrderedDict({
'loss': loss_val, 'loss': loss_val
'progress_bar': tqdm_dict,
'log': tqdm_dict
}) })
# can also return just a scalar instead of a dict (return loss_val) # can also return just a scalar instead of a dict (return loss_val)
return output return output
def validation_step(self, batch, batch_idx): def validation_step(self, data_batch, batch_i):
""" """
Lightning calls this inside the validation loop Lightning calls this inside the validation loop
:param batch: :param data_batch:
:return: :return:
""" """
x, y = batch x, y = data_batch
x = x.view(x.size(0), -1) x = x.view(x.size(0), -1)
y_hat = self.forward(x) y_hat = self.forward(x)
@@ -131,7 +126,7 @@ class LightningTemplateModel(LightningModule):
val_acc = val_acc.cuda(loss_val.device.index) val_acc = val_acc.cuda(loss_val.device.index)
# in DP mode (default) make sure if result is scalar, there's another dim in the beginning # in DP mode (default) make sure if result is scalar, there's another dim in the beginning
if self.trainer.use_dp or self.trainer.use_ddp2: if self.trainer.use_dp:
loss_val = loss_val.unsqueeze(0) loss_val = loss_val.unsqueeze(0)
val_acc = val_acc.unsqueeze(0) val_acc = val_acc.unsqueeze(0)
@@ -159,22 +154,21 @@ class LightningTemplateModel(LightningModule):
val_loss = output['val_loss'] val_loss = output['val_loss']
# reduce manually when using dp # reduce manually when using dp
if self.trainer.use_dp or self.trainer.use_ddp2: if self.trainer.use_dp:
val_loss = torch.mean(val_loss) val_loss = torch.mean(val_loss)
val_loss_mean += val_loss val_loss_mean += val_loss
# reduce manually when using dp # reduce manually when using dp
val_acc = output['val_acc'] val_acc = output['val_acc']
if self.trainer.use_dp or self.trainer.use_ddp2: if self.trainer.use_dp:
val_acc = torch.mean(val_acc) val_acc = torch.mean(val_acc)
val_acc_mean += val_acc val_acc_mean += val_acc
val_loss_mean /= len(outputs) val_loss_mean /= len(outputs)
val_acc_mean /= len(outputs) val_acc_mean /= len(outputs)
tqdm_dict = {'val_loss': val_loss_mean, 'val_acc': val_acc_mean} tqdm_dic = {'val_loss': val_loss_mean, 'val_acc': val_acc_mean}
result = {'progress_bar': tqdm_dict, 'log': tqdm_dict, 'val_loss': val_loss_mean} return tqdm_dic
return result
# --------------------- # ---------------------
# TRAINING SETUP # TRAINING SETUP
@@ -195,37 +189,37 @@ class LightningTemplateModel(LightningModule):
dataset = MNIST(root=self.hparams.data_root, train=train, dataset = MNIST(root=self.hparams.data_root, train=train,
transform=transform, download=True) transform=transform, download=True)
# when using multi-node (ddp) we need to add the datasampler # when using multi-node (ddp) we need to add the datasampler
train_sampler = None train_sampler = None
batch_size = self.hparams.batch_size batch_size = self.hparams.batch_size
if self.use_ddp: if self.use_ddp:
train_sampler = DistributedSampler(dataset) train_sampler = DistributedSampler(dataset, rank=self.trainer.proc_rank)
batch_size = batch_size // self.trainer.world_size # scale batch size
should_shuffle = train_sampler is None should_shuffle = train_sampler is None
loader = DataLoader( loader = DataLoader(
dataset=dataset, dataset=dataset,
batch_size=batch_size, batch_size=batch_size,
shuffle=should_shuffle, shuffle=should_shuffle,
sampler=train_sampler, sampler=train_sampler
num_workers=0
) )
return loader return loader
@pl.data_loader @pl.data_loader
def train_dataloader(self): def tng_dataloader(self):
logging.info('training data loader called') print('tng data loader called')
return self.__dataloader(train=True) return self.__dataloader(train=True)
@pl.data_loader @pl.data_loader
def val_dataloader(self): def val_dataloader(self):
logging.info('val data loader called') print('val data loader called')
return self.__dataloader(train=False) return self.__dataloader(train=False)
@pl.data_loader @pl.data_loader
def test_dataloader(self): def test_dataloader(self):
logging.info('test data loader called') print('test data loader called')
return self.__dataloader(train=False) return self.__dataloader(train=False)
@staticmethod @staticmethod
@@ -236,23 +230,31 @@ class LightningTemplateModel(LightningModule):
:param root_dir: :param root_dir:
:return: :return:
""" """
parser = ArgumentParser(parents=[parent_parser]) parser = HyperOptArgumentParser(strategy=parent_parser.strategy, parents=[parent_parser])
# param overwrites # param overwrites
# parser.set_defaults(gradient_clip_val=5.0) # parser.set_defaults(gradient_clip=5.0)
# network params # network params
parser.add_argument('--in_features', default=28 * 28, type=int) parser.add_argument('--in_features', default=28 * 28, type=int)
parser.add_argument('--out_features', default=10, type=int) parser.add_argument('--out_features', default=10, type=int)
# use 500 for CPU, 50000 for GPU to see speed difference # use 500 for CPU, 50000 for GPU to see speed difference
parser.add_argument('--hidden_dim', default=50000, type=int) parser.add_argument('--hidden_dim', default=50000, type=int)
parser.add_argument('--drop_prob', default=0.2, type=float) parser.opt_list('--drop_prob', default=0.2, options=[0.2, 0.5], type=float, tunable=False)
parser.add_argument('--learning_rate', default=0.001, type=float)
# data # data
parser.add_argument('--data_root', default=os.path.join(root_dir, 'mnist'), type=str) parser.add_argument('--data_root', default=os.path.join(root_dir, 'mnist'), type=str)
# training params (opt) # training params (opt)
parser.add_argument('--optimizer_name', default='adam', type=str) parser.opt_list('--learning_rate', default=0.001 * 8, type=float,
parser.add_argument('--batch_size', default=64, type=int) options=[0.0001, 0.0005, 0.001, 0.005],
tunable=False)
parser.opt_list('--optimizer_name', default='adam', type=str,
options=['adam'], tunable=False)
# if using 2 nodes with 4 gpus each the batch size here
# (256) will be 256 / (2*8) = 16 per gpu
parser.opt_list('--batch_size', default=256 * 8, type=int,
options=[32, 64, 128, 256], tunable=False,
help='batch size will be divided over all gpus being used across all nodes')
return parser return parser
@@ -0,0 +1,172 @@
"""
Multi-node example (GPU)
"""
import os
import numpy as np
from time import sleep
import torch
from test_tube import HyperOptArgumentParser, Experiment, SlurmCluster
from pytorch_lightning.models.trainer import Trainer
from pytorch_lightning.callbacks import EarlyStopping, ModelCheckpoint
from examples.new_project_templates.lightning_module_template import LightningTemplateModel
SEED = 2334
torch.manual_seed(SEED)
np.random.seed(SEED)
def main_local(hparams):
main(hparams, None, None)
def main(hparams, cluster, results_dict):
"""
Main training routine specific for this project
:param hparams:
:return:
"""
# ------------------------
# 1 INIT LIGHTNING MODEL
# ------------------------
print('loading model...')
model = LightningTemplateModel(hparams)
print('model built')
# ------------------------
# 2 INIT TEST TUBE EXP
# ------------------------
# when using grid search, it's possible for all models to start at once
# and use the same test tube experiment version
relative_node_id = int(os.environ['SLURM_NODEID'])
sleep(relative_node_id + 1)
# init experiment
exp = Experiment(
name=hyperparams.experiment_name,
save_dir=hyperparams.test_tube_save_path,
autosave=False,
description='test demo'
)
exp.argparse(hparams)
exp.save()
# ------------------------
# 3 DEFINE CALLBACKS
# ------------------------
model_save_path = '{}/{}/{}'.format(hparams.model_save_path, exp.name, exp.version)
early_stop = EarlyStopping(
monitor='val_acc',
patience=3,
verbose=True,
mode='max'
)
checkpoint = ModelCheckpoint(
filepath=model_save_path,
save_best_only=True,
verbose=True,
monitor='val_loss',
mode='min'
)
# ------------------------
# 4 INIT TRAINER
# ------------------------
trainer = Trainer(
experiment=exp,
cluster=cluster,
checkpoint_callback=checkpoint,
early_stop_callback=early_stop,
gpus=hparams.gpus,
nb_gpu_nodes=hyperparams.nb_gpu_nodes
)
# ------------------------
# 5 START TRAINING
# ------------------------
trainer.fit(model)
def optimize_on_cluster(hyperparams):
# enable cluster training
# log all scripts to the test tube folder
cluster = SlurmCluster(
hyperparam_optimizer=hyperparams,
log_path=hyperparams.slurm_log_path,
)
# email for cluster coms
cluster.notify_job_status(email='add_email_here', on_done=True, on_fail=True)
# configure cluster
cluster.per_experiment_nb_gpus = hyperparams.per_experiment_nb_gpus
cluster.per_experiment_nb_nodes = hyperparams.nb_gpu_nodes
cluster.job_time = '2:00:00'
cluster.gpu_type = 'volta'
cluster.memory_mb_per_node = 0
# any modules for code to run in env
cluster.add_command('source activate lightning')
# run only on 32GB voltas
cluster.add_slurm_cmd(cmd='constraint', value='volta32gb',
comment='use 32gb gpus')
cluster.add_slurm_cmd(cmd='partition', value=hyperparams.gpu_partition,
comment='use 32gb gpus')
# run hopt
# creates and submits jobs to slurm
cluster.optimize_parallel_cluster_gpu(
main,
nb_trials=hyperparams.nb_hopt_trials,
job_name=hyperparams.experiment_name
)
if __name__ == '__main__':
# use default args
root_dir = os.path.dirname(os.path.realpath(__file__))
demo_log_dir = os.path.join(root_dir, 'pt_lightning_demo_logs')
checkpoint_dir = os.path.join(demo_log_dir, 'model_weights')
test_tube_dir = os.path.join(demo_log_dir, 'test_tube_data')
slurm_out_dir = os.path.join(demo_log_dir, 'slurm_scripts')
parent_parser = HyperOptArgumentParser(strategy='grid_search', add_help=False)
# cluster args not defined inside the model
parent_parser.add_argument('--gpu_partition', type=str, help='consult your cluster manual')
# TODO: make 1 param
parent_parser.add_argument('--per_experiment_nb_gpus', type=int,
help='how many gpus to use in a node')
parent_parser.add_argument('--gpus', type=str, default='-1',
help='how many gpus to use in the node')
parent_parser.add_argument('--nb_gpu_nodes', type=int, default=1,
help='how many nodes to use in a cluster')
parent_parser.add_argument('--test_tube_save_path', type=str, default=test_tube_dir,
help='where to save logs')
parent_parser.add_argument('--slurm_log_path', type=str, default=slurm_out_dir,
help='where to save slurm meta')
parent_parser.add_argument('--model_save_path', type=str, default=checkpoint_dir,
help='where to save model')
parent_parser.add_argument('--experiment_name', type=str, default='pt_lightning_exp_a',
help='test tube exp name')
parent_parser.add_argument('--nb_hopt_trials', type=int, default=1,
help='how many grid search trials to run')
# allow model to overwrite or extend args
parser = LightningTemplateModel.add_model_specific_args(parent_parser, root_dir)
hyperparams = parser.parse_args()
# ---------------------
# RUN TRAINING
# ---------------------
# run on HPC cluster
print('RUNNING ON SLURM CLUSTER')
optimize_on_cluster(hyperparams)
@@ -0,0 +1,109 @@
"""
Runs a model on a single node on CPU only..
"""
import os
import numpy as np
import torch
from test_tube import HyperOptArgumentParser, Experiment
from pytorch_lightning.models.trainer import Trainer
from pytorch_lightning.callbacks import EarlyStopping, ModelCheckpoint
from examples.new_project_templates.lightning_module_template import LightningTemplateModel
SEED = 2334
torch.manual_seed(SEED)
np.random.seed(SEED)
def main(hparams):
"""
Main training routine specific for this project
:param hparams:
:return:
"""
# ------------------------
# 1 INIT LIGHTNING MODEL
# ------------------------
print('loading model...')
model = LightningTemplateModel(hparams)
print('model built')
# ------------------------
# 2 INIT TEST TUBE EXP
# ------------------------
# init experiment
exp = Experiment(
name=hyperparams.experiment_name,
save_dir=hyperparams.test_tube_save_path,
autosave=False,
description='test demo'
)
exp.argparse(hparams)
exp.save()
# ------------------------
# 3 DEFINE CALLBACKS
# ------------------------
model_save_path = '{}/{}/{}'.format(hparams.model_save_path, exp.name, exp.version)
early_stop = EarlyStopping(
monitor='val_acc',
patience=3,
verbose=True,
mode='max'
)
checkpoint = ModelCheckpoint(
filepath=model_save_path,
save_best_only=True,
verbose=True,
monitor='val_loss',
mode='min'
)
# ------------------------
# 4 INIT TRAINER
# ------------------------
trainer = Trainer(
experiment=exp,
checkpoint_callback=checkpoint,
early_stop_callback=early_stop,
)
# ------------------------
# 5 START TRAINING
# ------------------------
trainer.fit(model)
if __name__ == '__main__':
# dirs
root_dir = os.path.dirname(os.path.realpath(__file__))
demo_log_dir = os.path.join(root_dir, 'pt_lightning_demo_logs')
checkpoint_dir = os.path.join(demo_log_dir, 'model_weights')
test_tube_dir = os.path.join(demo_log_dir, 'test_tube_data')
# although we user hyperOptParser, we are using it only as argparse right now
parent_parser = HyperOptArgumentParser(strategy='grid_search', add_help=False)
# gpu args
parent_parser.add_argument('--test_tube_save_path', type=str,
default=test_tube_dir, help='where to save logs')
parent_parser.add_argument('--model_save_path', type=str,
default=checkpoint_dir, help='where to save model')
parent_parser.add_argument('--experiment_name', type=str,
default='pt_lightning_exp_a', help='test tube exp name')
# allow model to overwrite or extend args
parser = LightningTemplateModel.add_model_specific_args(parent_parser, root_dir)
hyperparams = parser.parse_args()
# ---------------------
# RUN TRAINING
# ---------------------
# run on HPC cluster
print('RUNNING ON CPU')
main(hyperparams)
@@ -0,0 +1,114 @@
"""
16-bit single node, CPU example
"""
import os
import numpy as np
import torch
from test_tube import HyperOptArgumentParser, Experiment
from pytorch_lightning.models.trainer import Trainer
from pytorch_lightning.callbacks import EarlyStopping, ModelCheckpoint
from examples.new_project_templates.lightning_module_template import LightningTemplateModel
SEED = 2334
torch.manual_seed(SEED)
np.random.seed(SEED)
def main(hparams):
"""
Main training routine specific for this project
:param hparams:
:return:
"""
# ------------------------
# 1 INIT LIGHTNING MODEL
# ------------------------
print('loading model...')
model = LightningTemplateModel(hparams)
print('model built')
# ------------------------
# 2 INIT TEST TUBE EXP
# ------------------------
# init experiment
exp = Experiment(
name=hyperparams.experiment_name,
save_dir=hyperparams.test_tube_save_path,
autosave=False,
description='test demo'
)
exp.argparse(hparams)
exp.save()
# ------------------------
# 3 DEFINE CALLBACKS
# ------------------------
model_save_path = '{}/{}/{}'.format(hparams.model_save_path, exp.name, exp.version)
early_stop = EarlyStopping(
monitor='val_acc',
patience=3,
verbose=True,
mode='max'
)
checkpoint = ModelCheckpoint(
filepath=model_save_path,
save_best_only=True,
verbose=True,
monitor='val_loss',
mode='min'
)
# ------------------------
# 4 INIT TRAINER
# ------------------------
trainer = Trainer(
experiment=exp,
checkpoint_callback=checkpoint,
early_stop_callback=early_stop,
gpus=hparams.gpus,
use_amp=True
)
# ------------------------
# 5 START TRAINING
# ------------------------
trainer.fit(model)
if __name__ == '__main__':
# dirs
root_dir = os.path.dirname(os.path.realpath(__file__))
demo_log_dir = os.path.join(root_dir, 'pt_lightning_demo_logs')
checkpoint_dir = os.path.join(demo_log_dir, 'model_weights')
test_tube_dir = os.path.join(demo_log_dir, 'test_tube_data')
# although we user hyperOptParser, we are using it only as argparse right now
parent_parser = HyperOptArgumentParser(strategy='grid_search', add_help=False)
# gpu args
parent_parser.add_argument('--gpus', type=str, default='-1',
help='how many gpus to use in the node.'
'value -1 uses all the gpus on the node')
parent_parser.add_argument('--test_tube_save_path', type=str, default=test_tube_dir,
help='where to save logs')
parent_parser.add_argument('--model_save_path', type=str, default=checkpoint_dir,
help='where to save model')
parent_parser.add_argument('--experiment_name', type=str, default='pt_lightning_exp_a',
help='test tube exp name')
# allow model to overwrite or extend args
parser = LightningTemplateModel.add_model_specific_args(parent_parser, root_dir)
hyperparams = parser.parse_args()
# ---------------------
# RUN TRAINING
# ---------------------
# run on HPC cluster
print(f'RUNNING INTERACTIVE MODE ON GPUS. gpu ids: {hyperparams.gpus}')
main(hyperparams)
@@ -0,0 +1,114 @@
"""
Runs a model on a single node across N-gpus.
"""
import os
import numpy as np
import torch
from test_tube import HyperOptArgumentParser, Experiment
from pytorch_lightning.models.trainer import Trainer
from pytorch_lightning.callbacks import EarlyStopping, ModelCheckpoint
from examples.new_project_templates.lightning_module_template import LightningTemplateModel
SEED = 2334
torch.manual_seed(SEED)
np.random.seed(SEED)
def main(hparams):
"""
Main training routine specific for this project
:param hparams:
:return:
"""
# ------------------------
# 1 INIT LIGHTNING MODEL
# ------------------------
print('loading model...')
model = LightningTemplateModel(hparams)
print('model built')
# ------------------------
# 2 INIT TEST TUBE EXP
# ------------------------
# init experiment
exp = Experiment(
name=hyperparams.experiment_name,
save_dir=hyperparams.test_tube_save_path,
autosave=False,
description='test demo'
)
exp.argparse(hparams)
exp.save()
# ------------------------
# 3 DEFINE CALLBACKS
# ------------------------
model_save_path = '{}/{}/{}'.format(hparams.model_save_path, exp.name, exp.version)
early_stop = EarlyStopping(
monitor='val_acc',
patience=3,
verbose=True,
mode='max'
)
checkpoint = ModelCheckpoint(
filepath=model_save_path,
save_best_only=True,
verbose=True,
monitor='val_loss',
mode='min'
)
# ------------------------
# 4 INIT TRAINER
# ------------------------
trainer = Trainer(
experiment=exp,
checkpoint_callback=checkpoint,
early_stop_callback=early_stop,
gpus=hparams.gpus,
distributed_backend='ddp'
)
# ------------------------
# 5 START TRAINING
# ------------------------
trainer.fit(model)
if __name__ == '__main__':
# dirs
root_dir = os.path.dirname(os.path.realpath(__file__))
demo_log_dir = os.path.join(root_dir, 'pt_lightning_demo_logs')
checkpoint_dir = os.path.join(demo_log_dir, 'model_weights')
test_tube_dir = os.path.join(demo_log_dir, 'test_tube_data')
# although we user hyperOptParser, we are using it only as argparse right now
parent_parser = HyperOptArgumentParser(strategy='grid_search', add_help=False)
# gpu args
parent_parser.add_argument('--gpus', type=str, default='-1',
help='how many gpus to use in the node.'
' value -1 uses all the gpus on the node')
parent_parser.add_argument('--test_tube_save_path', type=str, default=test_tube_dir,
help='where to save logs')
parent_parser.add_argument('--model_save_path', type=str, default=checkpoint_dir,
help='where to save model')
parent_parser.add_argument('--experiment_name', type=str, default='pt_lightning_exp_a',
help='test tube exp name')
# allow model to overwrite or extend args
parser = LightningTemplateModel.add_model_specific_args(parent_parser, root_dir)
hyperparams = parser.parse_args()
# ---------------------
# RUN TRAINING
# ---------------------
# run on HPC cluster
print(f'RUNNING INTERACTIVE MODE ON GPUS. gpu ids: {hyperparams.gpus}')
main(hyperparams)
@@ -0,0 +1,113 @@
"""
Runs a model on a single node across N-gpus using dataParallel
"""
import os
import numpy as np
import torch
from test_tube import HyperOptArgumentParser, Experiment
from pytorch_lightning.models.trainer import Trainer
from pytorch_lightning.callbacks import EarlyStopping, ModelCheckpoint
from examples.new_project_templates.lightning_module_template import LightningTemplateModel
SEED = 2334
torch.manual_seed(SEED)
np.random.seed(SEED)
def main(hparams):
"""
Main training routine specific for this project
:param hparams:
:return:
"""
# ------------------------
# 1 INIT LIGHTNING MODEL
# ------------------------
print('loading model...')
model = LightningTemplateModel(hparams)
print('model built')
# ------------------------
# 2 INIT TEST TUBE EXP
# ------------------------
# init experiment
exp = Experiment(
name=hyperparams.experiment_name,
save_dir=hyperparams.test_tube_save_path,
autosave=False,
description='test demo'
)
exp.argparse(hparams)
exp.save()
# ------------------------
# 3 DEFINE CALLBACKS
# ------------------------
model_save_path = '{}/{}/{}'.format(hparams.model_save_path, exp.name, exp.version)
early_stop = EarlyStopping(
monitor='val_acc',
patience=3,
verbose=True,
mode='max'
)
checkpoint = ModelCheckpoint(
filepath=model_save_path,
save_best_only=True,
verbose=True,
monitor='val_loss',
mode='min'
)
# ------------------------
# 4 INIT TRAINER
# ------------------------
trainer = Trainer(
experiment=exp,
checkpoint_callback=checkpoint,
early_stop_callback=early_stop,
gpus=hparams.gpus,
)
# ------------------------
# 5 START TRAINING
# ------------------------
trainer.fit(model)
if __name__ == '__main__':
# dirs
root_dir = os.path.dirname(os.path.realpath(__file__))
demo_log_dir = os.path.join(root_dir, 'pt_lightning_demo_logs')
checkpoint_dir = os.path.join(demo_log_dir, 'model_weights')
test_tube_dir = os.path.join(demo_log_dir, 'test_tube_data')
# although we user hyperOptParser, we are using it only as argparse right now
parent_parser = HyperOptArgumentParser(strategy='grid_search', add_help=False)
# gpu args
parent_parser.add_argument('--gpus', type=str, default='-1',
help='how many gpus to use in the node.'
' value -1 uses all the gpus on the node')
parent_parser.add_argument('--test_tube_save_path', type=str, default=test_tube_dir,
help='where to save logs')
parent_parser.add_argument('--model_save_path', type=str, default=checkpoint_dir,
help='where to save model')
parent_parser.add_argument('--experiment_name', type=str, default='pt_lightning_exp_a',
help='test tube exp name')
# allow model to overwrite or extend args
parser = LightningTemplateModel.add_model_specific_args(parent_parser, root_dir)
hyperparams = parser.parse_args()
# ---------------------
# RUN TRAINING
# ---------------------
# run on HPC cluster
print(f'RUNNING INTERACTIVE MODE ON GPUS. gpu ids: {hyperparams.gpus}')
main(hyperparams)
@@ -0,0 +1,74 @@
import os
import sys
from test_tube import HyperOptArgumentParser, Experiment
from pytorch_lightning.models.trainer import Trainer
from pytorch_lightning.utilities.arg_parse import add_default_args
from pytorch_lightning.callbacks.pt_callbacks import EarlyStopping, ModelCheckpoint
from examples.new_project_templates.lightning_module_template import LightningTemplateModel
def main(hparams):
"""
Main training routine specific for this project
:param hparams:
:return:
"""
# init experiment
exp = Experiment(
name=hparams.tt_name,
debug=hparams.debug,
save_dir=hparams.tt_save_path,
version=hparams.hpc_exp_number,
autosave=False,
description=hparams.tt_description
)
exp.argparse(hparams)
exp.save()
# build model
model = LightningTemplateModel(hparams)
# callbacks
early_stop = EarlyStopping(
monitor='val_acc',
patience=3,
mode='min',
verbose=True,
)
model_save_path = '{}/{}/{}'.format(hparams.model_save_path, exp.name, exp.version)
checkpoint = ModelCheckpoint(
filepath=model_save_path,
save_best_only=True,
verbose=True,
monitor='val_acc',
mode='min'
)
# configure trainer
trainer = Trainer(
experiment=exp,
checkpoint_callback=checkpoint,
early_stop_callback=early_stop,
)
# train model
trainer.fit(model)
if __name__ == '__main__':
# use default args given by lightning
root_dir = os.path.split(os.path.dirname(sys.modules['__main__'].__file__))[0]
parent_parser = HyperOptArgumentParser(strategy='random_search', add_help=False)
add_default_args(parent_parser, root_dir)
# allow model to overwrite or extend args
parser = LightningTemplateModel.add_model_specific_args(parent_parser)
hyperparams = parser.parse_args()
# train model
main(hyperparams)
@@ -1,25 +1,27 @@
""" """
To run this template just do: To run this template just do:
python gan.py python gan.py
After a few epochs, launch tensorboard to see the images being generated at every batch. After a few epochs, launch tensorboard to see the images being generated at every batch.
tensorboard --logdir default tensorboard --logdir default
""" """
import os
from argparse import ArgumentParser from argparse import ArgumentParser
from collections import OrderedDict import os
import numpy as np import numpy as np
import torch
import torch.nn as nn
import torch.nn.functional as F
import torchvision import torchvision
import torchvision.transforms as transforms import torchvision.transforms as transforms
from torch.utils.data import DataLoader
from torchvision.datasets import MNIST from torchvision.datasets import MNIST
from torch.utils.data import DataLoader
import torch.nn as nn
import torch.nn.functional as F
import torch
import pytorch_lightning as pl import pytorch_lightning as pl
from test_tube import Experiment
class Generator(nn.Module): class Generator(nn.Module):
@@ -82,7 +84,6 @@ class GAN(pl.LightningModule):
# cache for generated images # cache for generated images
self.generated_imgs = None self.generated_imgs = None
self.last_imgs = None
def forward(self, z): def forward(self, z):
return self.generator(z) return self.generator(z)
@@ -90,12 +91,11 @@ class GAN(pl.LightningModule):
def adversarial_loss(self, y_hat, y): def adversarial_loss(self, y_hat, y):
return F.binary_cross_entropy(y_hat, y) return F.binary_cross_entropy(y_hat, y)
def training_step(self, batch, batch_idx, optimizer_idx): def training_step(self, batch, batch_nb, optimizer_i):
imgs, _ = batch imgs, _ = batch
self.last_imgs = imgs
# train generator # train generator
if optimizer_idx == 0: if optimizer_i == 0:
# sample noise # sample noise
z = torch.randn(imgs.shape[0], self.hparams.latent_dim) z = torch.randn(imgs.shape[0], self.hparams.latent_dim)
@@ -107,54 +107,34 @@ class GAN(pl.LightningModule):
self.generated_imgs = self.forward(z) self.generated_imgs = self.forward(z)
# log sampled images # log sampled images
# sample_imgs = self.generated_imgs[:6] sample_imgs = self.generated_imgs[:6]
# grid = torchvision.utils.make_grid(sample_imgs) grid = torchvision.utils.make_grid(sample_imgs)
# self.logger.experiment.add_image('generated_images', grid, 0) self.experiment.add_image('generated_images', grid, 0)
# ground truth result (ie: all fake) # ground truth result (ie: all fake)
# put on GPU because we created this tensor inside training_loop
valid = torch.ones(imgs.size(0), 1) valid = torch.ones(imgs.size(0), 1)
if self.on_gpu:
valid = valid.cuda(imgs.device.index)
# adversarial loss is binary cross-entropy # adversarial loss is binary cross-entropy
g_loss = self.adversarial_loss(self.discriminator(self.generated_imgs), valid) g_loss = self.adversarial_loss(self.discriminator(self.generated_imgs), valid)
tqdm_dict = {'g_loss': g_loss}
output = OrderedDict({ return g_loss
'loss': g_loss,
'progress_bar': tqdm_dict,
'log': tqdm_dict
})
return output
# train discriminator # train discriminator
if optimizer_idx == 1: if optimizer_i == 1:
# Measure discriminator's ability to classify real from generated samples # Measure discriminator's ability to classify real from generated samples
# how well can it label as real? # how well can it label as real?
valid = torch.ones(imgs.size(0), 1) valid = torch.ones(imgs.size(0), 1)
if self.on_gpu:
valid = valid.cuda(imgs.device.index)
real_loss = self.adversarial_loss(self.discriminator(imgs), valid) real_loss = self.adversarial_loss(self.discriminator(imgs), valid)
# how well can it label as fake? # how well can it label as fake?
fake = torch.zeros(imgs.size(0), 1) fake = torch.zeros(imgs.size(0), 1)
if self.on_gpu: fake_loss = self.adversarial_loss(self.discriminator(self.generated_imgs.detach()), fake)
fake = fake.cuda(imgs.device.index)
fake_loss = self.adversarial_loss(
self.discriminator(self.generated_imgs.detach()), fake)
# discriminator loss is the average of these # discriminator loss is the average of these
d_loss = (real_loss + fake_loss) / 2 d_loss = (real_loss + fake_loss) / 2
tqdm_dict = {'d_loss': d_loss}
output = OrderedDict({ return d_loss
'loss': d_loss,
'progress_bar': tqdm_dict,
'log': tqdm_dict
})
return output
def configure_optimizers(self): def configure_optimizers(self):
lr = self.hparams.lr lr = self.hparams.lr
@@ -166,38 +146,22 @@ class GAN(pl.LightningModule):
return [opt_g, opt_d], [] return [opt_g, opt_d], []
@pl.data_loader @pl.data_loader
def train_dataloader(self): def tng_dataloader(self):
transform = transforms.Compose([transforms.ToTensor(), transform = transforms.Compose([transforms.ToTensor(),
transforms.Normalize([0.5], [0.5])]) transforms.Normalize([0.5], [0.5])])
dataset = MNIST(os.getcwd(), train=True, download=True, transform=transform) dataset = MNIST(os.getcwd(), train=True, download=True, transform=transform)
return DataLoader(dataset, batch_size=self.hparams.batch_size) return DataLoader(dataset, batch_size=self.hparams.batch_size)
def on_epoch_end(self):
z = torch.randn(8, self.hparams.latent_dim)
# match gpu device (or keep as cpu)
if self.on_gpu:
z = z.cuda(self.last_imgs.device.index)
# log sampled images
sample_imgs = self.forward(z)
grid = torchvision.utils.make_grid(sample_imgs)
self.logger.experiment.add_image(f'generated_images', grid, self.current_epoch)
def main(hparams): def main(hparams):
# ------------------------ # save tensorboard logs
# 1 INIT LIGHTNING MODEL exp = Experiment(save_dir=os.getcwd())
# ------------------------
# init model
model = GAN(hparams) model = GAN(hparams)
# ------------------------ # fit trainer on CPU
# 2 INIT TRAINER trainer = pl.Trainer(experiment=exp, max_nb_epochs=200)
# ------------------------
trainer = pl.Trainer()
# ------------------------
# 3 START TRAINING
# ------------------------
trainer.fit(model) trainer.fit(model)
@@ -205,12 +169,9 @@ if __name__ == '__main__':
parser = ArgumentParser() parser = ArgumentParser()
parser.add_argument("--batch_size", type=int, default=64, help="size of the batches") parser.add_argument("--batch_size", type=int, default=64, help="size of the batches")
parser.add_argument("--lr", type=float, default=0.0002, help="adam: learning rate") parser.add_argument("--lr", type=float, default=0.0002, help="adam: learning rate")
parser.add_argument("--b1", type=float, default=0.5, parser.add_argument("--b1", type=float, default=0.5, help="adam: decay of first order momentum of gradient")
help="adam: decay of first order momentum of gradient") parser.add_argument("--b2", type=float, default=0.999, help="adam: decay of first order momentum of gradient")
parser.add_argument("--b2", type=float, default=0.999, parser.add_argument("--latent_dim", type=int, default=100, help="dimensionality of the latent space")
help="adam: decay of first order momentum of gradient")
parser.add_argument("--latent_dim", type=int, default=100,
help="dimensionality of the latent space")
hparams = parser.parse_args() hparams = parser.parse_args()
+16
View File
@@ -0,0 +1,16 @@
site_name: PyTorch lightning Documentation
theme:
name: 'material'
docs_dir: docs
repo_name: 'williamFalcon/pytorch-lightning'
repo_url: https://github.com/williamFalcon/pytorch-lightning
site_dir: 'site'
site_description: 'Documentation for PyTorch LightningModule, the researcher version of keras.'
dev_addr: '0.0.0.0:8000'
#google_analytics: ['UA-aasd', 'sitename']
markdown_extensions:
- codehilite:
guess_lang: false
linenums: true
-11
View File
@@ -1,11 +0,0 @@
# Examples
This folder has 3 sections:
### Domain templates
These are templates to show common approaches such as GANs and RL.
### Basic examples
These show the most common use of Lightning for either CPU or GPU training.
### Multi-node examples
These show how to run jobs on a GPU cluster using lightning.
-146
View File
@@ -1,146 +0,0 @@
"""
Template model definition
-------------------------
In 99% of cases you want to just copy `one of the examples
<https://github.com/PyTorchLightning/pytorch-lightning/tree/master/pl_examples>`_
to start a new lightningModule and change the core of what your model is actually trying to do.
.. code-block:: bash
# get a copy of the module template
wget https://raw.githubusercontent.com/PyTorchLightning/pytorch-lightning/master/pl_examples/new_project_templates/lightning_module_template.py # noqa: E501
Trainer Example
---------------
**`__main__` function**
Normally, we want to let the `__main__` function start the training.
Inside the main we parse training arguments with whatever hyperparameters we want.
Your LightningModule will have a chance to add hyperparameters.
.. code-block:: python
from test_tube import HyperOptArgumentParser
if __name__ == '__main__':
# use default args given by lightning
root_dir = os.path.split(os.path.dirname(sys.modules['__main__'].__file__))[0]
parent_parser = HyperOptArgumentParser(strategy='random_search', add_help=False)
add_default_args(parent_parser, root_dir)
# allow model to overwrite or extend args
parser = ExampleModel.add_model_specific_args(parent_parser)
hyperparams = parser.parse_args()
# train model
main(hyperparams)
**Main Function**
The main function is your entry into the program. This is where you init your model, checkpoint directory,
and launch the training. The main function should have 3 arguments:
- hparams: a configuration of hyperparameters.
- slurm_manager: Slurm cluster manager object (can be None)
- dict: for you to return any values you want (useful in meta-learning, otherwise set to)
.. code-block:: python
def main(hparams, cluster, results_dict):
# build model
model = MyLightningModule(hparams)
# configure trainer
trainer = Trainer()
# train model
trainer.fit(model)
The `__main__` function will start training on your **main** function.
If you use the HyperParameterOptimizer in hyper parameter optimization mode,
this main function will get one set of hyperparameters. If you use it as a simple
argument parser you get the default arguments in the argument parser.
So, calling main(hyperparams) runs the model with the default argparse arguments.::
main(hyperparams)
CPU hyperparameter search
-------------------------
.. code-block:: python
# run a grid search over 20 hyperparameter combinations.
hyperparams.optimize_parallel_cpu(
main_local,
nb_trials=20,
nb_workers=1
)
Hyperparameter search on a single or multiple GPUs
--------------------------------------------------
.. code-block:: python
# run a grid search over 20 hyperparameter combinations.
hyperparams.optimize_parallel_gpu(
main_local,
nb_trials=20,
nb_workers=1,
gpus=[0,1,2,3]
)
Hyperparameter search on a SLURM HPC cluster
--------------------------------------------
.. code-block:: python
def optimize_on_cluster(hyperparams):
# enable cluster training
cluster = SlurmCluster(
hyperparam_optimizer=hyperparams,
log_path=hyperparams.tt_save_path,
test_tube_exp_name=hyperparams.tt_name
)
# email for cluster coms
cluster.notify_job_status(email='add_email_here', on_done=True, on_fail=True)
# configure cluster
cluster.per_experiment_nb_gpus = hyperparams.per_experiment_nb_gpus
cluster.job_time = '48:00:00'
cluster.gpu_type = '1080ti'
cluster.memory_mb_per_node = 48000
# any modules for code to run in env
cluster.add_command('source activate pytorch_lightning')
# name of exp
job_display_name = hyperparams.tt_name.split('_')[0]
job_display_name = job_display_name[0:3]
# run hopt
logging.info('submitting jobs...')
cluster.optimize_parallel_cluster_gpu(
main,
nb_trials=hyperparams.nb_hopt_trials,
job_name=job_display_name
)
# run cluster hyperparameter search
optimize_on_cluster(hyperparams)
"""
from .basic_examples.lightning_module_template import LightningTemplateModel
__all__ = [
'LightningTemplateModel'
]
-39
View File
@@ -1,39 +0,0 @@
# Basic Examples
Use these examples to test how lightning works.
#### Test on CPU
```bash
python cpu_template.py
```
---
#### Train on a single GPU
```bash
python gpu_template.py --gpus 1
```
---
#### DataParallel (dp)
Train on multiple GPUs using DataParallel.
```bash
python gpu_template.py --gpus 2 --distributed_backend dp
```
---
#### DistributedDataParallel (ddp)
Train on multiple GPUs using DistributedDataParallel
```bash
python gpu_template.py --gpus 2 --distributed_backend ddp
```
---
#### DistributedDataParallel+DP (ddp2)
Train on multiple GPUs using DistributedDataParallel + dataparallel.
On a single node, uses all GPUs for 1 model. Then shares gradient information
across nodes.
```bash
python gpu_template.py --gpus 2 --distributed_backend ddp2
```
@@ -1,54 +0,0 @@
"""
Runs a model on a single node across N-gpus.
"""
import os
from argparse import ArgumentParser
import numpy as np
import torch
from pl_examples.basic_examples.lightning_module_template import LightningTemplateModel
from pytorch_lightning import Trainer
SEED = 2334
torch.manual_seed(SEED)
np.random.seed(SEED)
def main(hparams):
"""
Main training routine specific for this project
:param hparams:
"""
# ------------------------
# 1 INIT LIGHTNING MODEL
# ------------------------
model = LightningTemplateModel(hparams)
# ------------------------
# 2 INIT TRAINER
# ------------------------
trainer = Trainer()
# ------------------------
# 3 START TRAINING
# ------------------------
trainer.fit(model)
if __name__ == '__main__':
# ------------------------
# TRAINING ARGUMENTS
# ------------------------
# these are project-wide arguments
root_dir = os.path.dirname(os.path.realpath(__file__))
parent_parser = ArgumentParser(add_help=False)
# each LightningModule defines arguments relevant to it
parser = LightningTemplateModel.add_model_specific_args(parent_parser, root_dir)
hyperparams = parser.parse_args()
# ---------------------
# RUN TRAINING
# ---------------------
main(hyperparams)
@@ -1,79 +0,0 @@
"""
Runs a model on a single node across N-gpus.
"""
import os
from argparse import ArgumentParser
import numpy as np
import torch
from pl_examples.basic_examples.lightning_module_template import LightningTemplateModel
from pytorch_lightning import Trainer
SEED = 2334
torch.manual_seed(SEED)
np.random.seed(SEED)
def main(hparams):
"""
Main training routine specific for this project
:param hparams:
"""
# ------------------------
# 1 INIT LIGHTNING MODEL
# ------------------------
model = LightningTemplateModel(hparams)
# ------------------------
# 2 INIT TRAINER
# ------------------------
trainer = Trainer(
gpus=hparams.gpus,
distributed_backend=hparams.distributed_backend,
use_amp=hparams.use_16bit
)
# ------------------------
# 3 START TRAINING
# ------------------------
trainer.fit(model)
if __name__ == '__main__':
# ------------------------
# TRAINING ARGUMENTS
# ------------------------
# these are project-wide arguments
root_dir = os.path.dirname(os.path.realpath(__file__))
parent_parser = ArgumentParser(add_help=False)
# gpu args
parent_parser.add_argument(
'--gpus',
type=int,
default=2,
help='how many gpus'
)
parent_parser.add_argument(
'--distributed_backend',
type=str,
default='dp',
help='supports three options dp, ddp, ddp2'
)
parent_parser.add_argument(
'--use_16bit',
dest='use_16bit',
action='store_true',
help='if true uses 16 bit precision'
)
# each LightningModule defines arguments relevant to it
parser = LightningTemplateModel.add_model_specific_args(parent_parser, root_dir)
hyperparams = parser.parse_args()
# ---------------------
# RUN TRAINING
# ---------------------
main(hyperparams)
@@ -1,246 +0,0 @@
"""
This example is largely adapted from https://github.com/pytorch/examples/blob/master/imagenet/main.py
"""
import argparse
import os
import random
from collections import OrderedDict
import torch
import torch.backends.cudnn as cudnn
import torch.nn.functional as F
import torch.nn.parallel
import torch.optim as optim
import torch.optim.lr_scheduler as lr_scheduler
import torch.utils.data
import torch.utils.data.distributed
import torchvision.datasets as datasets
import torchvision.models as models
import torchvision.transforms as transforms
import pytorch_lightning as pl
# pull out resnet names from torchvision models
MODEL_NAMES = sorted(
name for name in models.__dict__
if name.islower() and not name.startswith("__") and callable(models.__dict__[name])
)
class ImageNetLightningModel(pl.LightningModule):
def __init__(self, hparams):
super(ImageNetLightningModel, self).__init__()
self.hparams = hparams
self.model = models.__dict__[self.hparams.arch](pretrained=self.hparams.pretrained)
def training_step(self, batch, batch_idx):
images, target = batch
output = self.model(images)
loss_val = F.cross_entropy(output, target)
acc1, acc5 = self.__accuracy(output, target, topk=(1, 5))
# in DP mode (default) make sure if result is scalar, there's another dim in the beginning
if self.trainer.use_dp or self.trainer.use_ddp2:
loss_val = loss_val.unsqueeze(0)
acc1 = acc1.unsqueeze(0)
acc5 = acc5.unsqueeze(0)
tqdm_dict = {'train_loss': loss_val}
output = OrderedDict({
'loss': loss_val,
'acc1': acc1,
'acc5': acc5,
'progress_bar': tqdm_dict,
'log': tqdm_dict
})
return output
def validation_step(self, batch, batch_idx):
images, target = batch
output = self.model(images)
loss_val = F.cross_entropy(output, target)
acc1, acc5 = self.__accuracy(output, target, topk=(1, 5))
# in DP mode (default) make sure if result is scalar, there's another dim in the beginning
if self.trainer.use_dp or self.trainer.use_ddp2:
loss_val = loss_val.unsqueeze(0)
acc1 = acc1.unsqueeze(0)
acc5 = acc5.unsqueeze(0)
output = OrderedDict({
'val_loss': loss_val,
'val_acc1': acc1,
'val_acc5': acc5,
})
return output
def validation_end(self, outputs):
tqdm_dict = {}
for metric_name in ["val_loss", "val_acc1", "val_acc5"]:
metric_total = 0
for output in outputs:
metric_value = output[metric_name]
# reduce manually when using dp
if self.trainer.use_dp or self.trainer.use_ddp2:
metric_value = torch.mean(metric_value)
metric_total += metric_value
tqdm_dict[metric_name] = metric_total / len(outputs)
result = {'progress_bar': tqdm_dict, 'log': tqdm_dict, 'val_loss': tqdm_dict["val_loss"]}
return result
@classmethod
def __accuracy(cls, output, target, topk=(1,)):
"""Computes the accuracy over the k top predictions for the specified values of k"""
with torch.no_grad():
maxk = max(topk)
batch_size = target.size(0)
_, pred = output.topk(maxk, 1, True, True)
pred = pred.t()
correct = pred.eq(target.view(1, -1).expand_as(pred))
res = []
for k in topk:
correct_k = correct[:k].view(-1).float().sum(0, keepdim=True)
res.append(correct_k.mul_(100.0 / batch_size))
return res
def configure_optimizers(self):
optimizer = optim.SGD(
self.parameters(),
lr=self.hparams.lr,
momentum=self.hparams.momentum,
weight_decay=self.hparams.weight_decay
)
scheduler = lr_scheduler.ExponentialLR(optimizer, gamma=0.1)
return [optimizer], [scheduler]
@pl.data_loader
def train_dataloader(self):
normalize = transforms.Normalize(
mean=[0.485, 0.456, 0.406],
std=[0.229, 0.224, 0.225],
)
train_dir = os.path.join(self.hparams.data, 'train')
train_dataset = datasets.ImageFolder(
train_dir,
transforms.Compose([
transforms.RandomResizedCrop(224),
transforms.RandomHorizontalFlip(),
transforms.ToTensor(),
normalize,
]))
if self.use_ddp:
train_sampler = torch.utils.data.distributed.DistributedSampler(train_dataset)
else:
train_sampler = None
train_loader = torch.utils.data.DataLoader(
dataset=train_dataset,
batch_size=self.hparams.batch_size,
shuffle=(train_sampler is None),
num_workers=0,
sampler=train_sampler
)
return train_loader
@pl.data_loader
def val_dataloader(self):
normalize = transforms.Normalize(
mean=[0.485, 0.456, 0.406],
std=[0.229, 0.224, 0.225],
)
val_dir = os.path.join(self.hparams.data, 'val')
val_loader = torch.utils.data.DataLoader(
datasets.ImageFolder(val_dir, transforms.Compose([
transforms.Resize(256),
transforms.CenterCrop(224),
transforms.ToTensor(),
normalize,
])),
batch_size=self.hparams.batch_size,
shuffle=False,
num_workers=0,
)
return val_loader
@staticmethod
def add_model_specific_args(parent_parser): # pragma: no cover
parser = argparse.ArgumentParser(parents=[parent_parser])
parser.add_argument('-a', '--arch', metavar='ARCH', default='resnet18', choices=MODEL_NAMES,
help='model architecture: ' +
' | '.join(MODEL_NAMES) +
' (default: resnet18)')
parser.add_argument('--epochs', default=90, type=int, metavar='N',
help='number of total epochs to run')
parser.add_argument('--seed', type=int, default=None,
help='seed for initializing training. ')
parser.add_argument('-b', '--batch-size', default=256, type=int,
metavar='N',
help='mini-batch size (default: 256), this is the total '
'batch size of all GPUs on the current node when '
'using Data Parallel or Distributed Data Parallel')
parser.add_argument('--lr', '--learning-rate', default=0.1, type=float,
metavar='LR', help='initial learning rate', dest='lr')
parser.add_argument('--momentum', default=0.9, type=float, metavar='M',
help='momentum')
parser.add_argument('--wd', '--weight-decay', default=1e-4, type=float,
metavar='W', help='weight decay (default: 1e-4)',
dest='weight_decay')
parser.add_argument('--pretrained', dest='pretrained', action='store_true',
help='use pre-trained model')
return parser
def get_args():
parent_parser = argparse.ArgumentParser(add_help=False)
parent_parser.add_argument('--data-path', metavar='DIR', type=str,
help='path to dataset')
parent_parser.add_argument('--save-path', metavar='DIR', default=".", type=str,
help='path to save output')
parent_parser.add_argument('--gpus', type=int, default=1,
help='how many gpus')
parent_parser.add_argument('--distributed-backend', type=str, default='dp', choices=('dp', 'ddp', 'ddp2'),
help='supports three options dp, ddp, ddp2')
parent_parser.add_argument('--use-16bit', dest='use-16bit', action='store_true',
help='if true uses 16 bit precision')
parent_parser.add_argument('-e', '--evaluate', dest='evaluate', action='store_true',
help='evaluate model on validation set')
parser = ImageNetLightningModel.add_model_specific_args(parent_parser)
return parser.parse_args()
def main(hparams):
model = ImageNetLightningModel(hparams)
if hparams.seed is not None:
random.seed(hparams.seed)
torch.manual_seed(hparams.seed)
cudnn.deterministic = True
trainer = pl.Trainer(
default_save_path=hparams.save_path,
gpus=hparams.gpus,
max_epochs=hparams.epochs,
distributed_backend=hparams.distributed_backend,
use_amp=hparams.use_16bit
)
if hparams.evaluate:
trainer.run_evaluation()
else:
trainer.fit(model)
if __name__ == '__main__':
main(get_args())
-21
View File
@@ -1,21 +0,0 @@
# Multi-node example
This demo launches a job using 2 GPUs on 2 different nodes (4 GPUs total).
To run this demo do the following:
1. Log into the jumphost node of your SLURM-managed cluster.
2. Create a conda environment with Lightning and a GPU PyTorch version.
3. Choose a script to submit
#### DDP
Submit this job to run with distributedDataParallel (2 nodes, 2 gpus each)
```bash
sbatch ddp_job_submit.sh YourEnv
```
#### DDP2
Submit this job to run with a different implementation of distributedDataParallel.
In this version, each node acts like DataParallel but syncs across nodes like DDP.
```bash
sbatch ddp2_job_submit.sh YourEnv
```
@@ -1,27 +0,0 @@
#!/bin/bash -l
# SLURM SUBMIT SCRIPT
#SBATCH --nodes=2
#SBATCH --gres=gpu:2
#SBATCH --ntasks-per-node=1
#SBATCH --mem=0
#SBATCH --time=0-02:00:00
# activate conda env
source activate $1
# -------------------------
# debugging flags (optional)
export NCCL_DEBUG=INFO
export PYTHONFAULTHANDLER=1
# on your cluster you might need these:
# set the network interface
# export NCCL_SOCKET_IFNAME=^docker0,lo
# might need the latest cuda
# module load NCCL/2.4.7-1-cuda.10.0
# -------------------------
# run script from above
srun python3 multi_node_ddp2_demo.py
@@ -1,27 +0,0 @@
#!/bin/bash -l
# SLURM SUBMIT SCRIPT
#SBATCH --nodes=2
#SBATCH --gres=gpu:2
#SBATCH --ntasks-per-node=2
#SBATCH --mem=0
#SBATCH --time=0-02:00:00
# activate conda env
source activate $1
# -------------------------
# debugging flags (optional)
export NCCL_DEBUG=INFO
export PYTHONFAULTHANDLER=1
# on your cluster you might need these:
# set the network interface
# export NCCL_SOCKET_IFNAME=^docker0,lo
# might need the latest cuda
# module load NCCL/2.4.7-1-cuda.10.0
# -------------------------
# run script from above
srun python3 multi_node_ddp_demo.py
@@ -1,55 +0,0 @@
"""
Multi-node example (GPU)
"""
import os
from argparse import ArgumentParser
import numpy as np
import torch
from pl_examples.basic_examples.lightning_module_template import LightningTemplateModel
from pytorch_lightning import Trainer
SEED = 2334
torch.manual_seed(SEED)
np.random.seed(SEED)
def main(hparams):
"""
Main training routine specific for this project
:param hparams:
:return:
"""
# ------------------------
# 1 INIT LIGHTNING MODEL
# ------------------------
model = LightningTemplateModel(hparams)
# ------------------------
# 2 INIT TRAINER
# ------------------------
trainer = Trainer(
gpus=2,
num_nodes=2,
distributed_backend='ddp2'
)
# ------------------------
# 3 START TRAINING
# ------------------------
trainer.fit(model)
if __name__ == '__main__':
root_dir = os.path.dirname(os.path.realpath(__file__))
parent_parser = ArgumentParser(add_help=False)
# each LightningModule defines arguments relevant to it
parser = LightningTemplateModel.add_model_specific_args(parent_parser, root_dir)
hyperparams = parser.parse_args()
# ---------------------
# RUN TRAINING
# ---------------------
main(hyperparams)
@@ -1,55 +0,0 @@
"""
Multi-node example (GPU)
"""
import os
from argparse import ArgumentParser
import numpy as np
import torch
from pl_examples.basic_examples.lightning_module_template import LightningTemplateModel
from pytorch_lightning import Trainer
SEED = 2334
torch.manual_seed(SEED)
np.random.seed(SEED)
def main(hparams):
"""
Main training routine specific for this project
:param hparams:
:return:
"""
# ------------------------
# 1 INIT LIGHTNING MODEL
# ------------------------
model = LightningTemplateModel(hparams)
# ------------------------
# 2 INIT TRAINER
# ------------------------
trainer = Trainer(
gpus=2,
num_nodes=2,
distributed_backend='ddp'
)
# ------------------------
# 3 START TRAINING
# ------------------------
trainer.fit(model)
if __name__ == '__main__':
root_dir = os.path.dirname(os.path.realpath(__file__))
parent_parser = ArgumentParser(add_help=False)
# each LightningModule defines arguments relevant to it
parser = LightningTemplateModel.add_model_specific_args(parent_parser, root_dir)
hyperparams = parser.parse_args()
# ---------------------
# RUN TRAINING
# ---------------------
main(hyperparams)
+8 -37
View File
@@ -1,38 +1,9 @@
"""Package info""" from .models.trainer import Trainer
from .root_module.root_module import LightningModule
from .root_module.decorators import data_loader
__version__ = '0.6.0' __all__ = [
__author__ = 'William Falcon et al.' 'Trainer',
__author_email__ = 'waf2107@columbia.edu' 'LightningModule',
__license__ = 'Apache-2.0' 'data_loader',
__copyright__ = 'Copyright (c) 2018-2019, %s.' % __author__ ]
__homepage__ = 'https://github.com/PyTorchLightning/pytorch-lightning'
# this has to be simple string, see: https://github.com/pypa/twine/issues/522
__docs__ = "PyTorch Lightning is the lightweight PyTorch wrapper for ML researchers." \
" Scale your models. Write less boilerplate."
try:
# This variable is injected in the __builtins__ by the build
# process. It used to enable importing subpackages of skimage when
# the binaries are not built
__LIGHTNING_SETUP__
except NameError:
__LIGHTNING_SETUP__ = False
if __LIGHTNING_SETUP__:
import sys
sys.stderr.write('Partial import of torchlightning during the build process.\n')
# We are not importing the rest of the scikit during the build
# process, as it may not be compiled yet
else:
from .trainer.trainer import Trainer
from .core.lightning import LightningModule
from .core.decorators import data_loader
import logging
__all__ = [
'Trainer',
'LightningModule',
'data_loader',
]
logging.basicConfig(level=logging.INFO)
+102 -212
View File
@@ -1,20 +1,33 @@
"""
Callbacks
====================================
Callbacks supported by Lightning
"""
import os import os
import shutil import shutil
import logging
import warnings import warnings
import numpy as np import numpy as np
from pytorch_lightning.overrides.data_parallel import LightningDistributedDataParallel from pytorch_lightning.pt_overrides.override_data_parallel import LightningDistributedDataParallel
class Callback(object): class Callback(object):
r"""Abstract base class used to build new callbacks. """Abstract base class used to build new callbacks.
# Properties
params: dict. Training parameters
(eg. verbosity, batch size, number of epochs...).
model: instance of `keras.models.Model`.
Reference of the model being trained.
The `logs` dictionary that callback methods
take as argument will contain keys for quantities relevant to
the current batch or epoch.
Currently, the `.fit()` method of the `Sequential` model class
will include the following quantities in the `logs` that
it passes to its callbacks:
on_epoch_end: logs include `acc` and `loss`, and
optionally include `val_loss`
(if validation is enabled in `fit`), and `val_acc`
(if validation and accuracy monitoring are enabled).
on_batch_begin: logs include `size`,
the number of samples in the current batch.
on_batch_end: logs include `loss`, and optionally `acc`
(if accuracy monitoring is enabled).
""" """
def __init__(self): def __init__(self):
@@ -30,30 +43,12 @@ class Callback(object):
self.model = model self.model = model
def on_epoch_begin(self, epoch, logs=None): def on_epoch_begin(self, epoch, logs=None):
"""
called when the epoch begins
Args:
epoch (int): current epoch
logs (dict): key-value pairs of quantities to monitor
Example:
on_epoch_begin(epoch=2, logs={'val_loss': 0.2})
"""
pass pass
def on_epoch_end(self, epoch, logs=None): def on_epoch_end(self, epoch, logs=None):
pass pass
def on_batch_begin(self, batch, logs=None): def on_batch_begin(self, batch, logs=None):
"""
called when the batch starts.
Args:
batch (Tensor): current batch tensor
logs (dict): key-value pairs of quantities to monitor
"""
pass pass
def on_batch_end(self, batch, logs=None): def on_batch_end(self, batch, logs=None):
@@ -67,33 +62,23 @@ class Callback(object):
class EarlyStopping(Callback): class EarlyStopping(Callback):
r""" """Stop training when a monitored quantity has stopped improving.
Stop training when a monitored quantity has stopped improving. # Arguments
monitor: quantity to be monitored.
Args: min_delta: minimum change in the monitored quantity
monitor (str): quantity to be monitored.
min_delta (float): minimum change in the monitored quantity
to qualify as an improvement, i.e. an absolute to qualify as an improvement, i.e. an absolute
change of less than min_delta, will count as no change of less than min_delta, will count as no
improvement. improvement.
patience (int): number of epochs with no improvement patience: number of epochs with no improvement
after which training will be stopped. after which training will be stopped.
verbose (bool): verbosity mode. verbose: verbosity mode.
mode (str): one of {auto, min, max}. In `min` mode, mode: one of {auto, min, max}. In `min` mode,
training will stop when the quantity training will stop when the quantity
monitored has stopped decreasing; in `max` monitored has stopped decreasing; in `max`
mode it will stop when the quantity mode it will stop when the quantity
monitored has stopped increasing; in `auto` monitored has stopped increasing; in `auto`
mode, the direction is automatically inferred mode, the direction is automatically inferred
from the name of the monitored quantity. from the name of the monitored quantity.
Example::
from pytorch_lightning import Trainer
from pytorch_lightning.callbacks import EarlyStopping
early_stopping = EarlyStopping('val_loss')
Trainer(early_stop_callback=early_stopping)
""" """
def __init__(self, monitor='val_loss', def __init__(self, monitor='val_loss',
@@ -108,7 +93,7 @@ class EarlyStopping(Callback):
self.stopped_epoch = 0 self.stopped_epoch = 0
if mode not in ['auto', 'min', 'max']: if mode not in ['auto', 'min', 'max']:
logging.info(f'EarlyStopping mode {mode} is unknown, fallback to auto mode.') print('EarlyStopping mode %s is unknown, fallback to auto mode.' % mode)
mode = 'auto' mode = 'auto'
if mode == 'min': if mode == 'min':
@@ -138,12 +123,10 @@ class EarlyStopping(Callback):
current = logs.get(self.monitor) current = logs.get(self.monitor)
stop_training = False stop_training = False
if current is None: if current is None:
warnings.warn( print('Early stopping conditioned on metric `%s` '
f'Early stopping conditioned on metric `{self.monitor}`' 'which is not available. Available metrics are: %s' %
f' which is not available. Available metrics are: {",".join(list(logs.keys()))}', (self.monitor, ','.join(list(logs.keys()))), RuntimeWarning)
RuntimeWarning) exit(-1)
stop_training = True
return stop_training
if self.monitor_op(current - self.min_delta, self.best): if self.monitor_op(current - self.min_delta, self.best):
self.best = current self.best = current
@@ -159,217 +142,124 @@ class EarlyStopping(Callback):
def on_train_end(self, logs=None): def on_train_end(self, logs=None):
if self.stopped_epoch > 0 and self.verbose > 0: if self.stopped_epoch > 0 and self.verbose > 0:
logging.info(f'Epoch {self.stopped_epoch + 1:05d}: early stopping') print('Epoch %05d: early stopping' % (self.stopped_epoch + 1))
class ModelCheckpoint(Callback): class ModelCheckpoint(Callback):
r""" """Save the model after every epoch.
`filepath` can contain named formatting options,
Save the model after every epoch. which will be filled the value of `epoch` and
keys in `logs` (passed in `on_epoch_end`).
Args: For example: if `filepath` is `weights.{epoch:02d}-{val_loss:.2f}.hdf5`,
filepath (str): path to save the model file. then the model checkpoints will be saved with the epoch number and
Can contain named formatting options to be auto-filled. the validation loss in the filename.
# Arguments
Example:: filepath: string, path to save the model file.
monitor: quantity to monitor.
# save epoch and val_loss in name verbose: verbosity mode, 0 or 1.
ModelCheckpoint(filepath='{epoch:02d}-{val_loss:.2f}.hdf5') save_best_only: if `save_best_only=True`,
# saves file like: /path/epoch_2-val_loss_0.2.hdf5 the latest best model according to
monitor (str): quantity to monitor. the quantity monitored will not be overwritten.
verbose (bool): verbosity mode, 0 or 1. mode: one of {auto, min, max}.
save_top_k (int): if `save_top_k == k`, If `save_best_only=True`, the decision
the best k models according to
the quantity monitored will be saved.
if `save_top_k == 0`, no models are saved.
if `save_top_k == -1`, all models are saved.
Please note that the monitors are checked every `period` epochs.
if `save_top_k >= 2` and the callback is called multiple
times inside an epoch, the name of the saved file will be
appended with a version count starting with `v0`.
mode (str): one of {auto, min, max}.
If `save_top_k != 0`, the decision
to overwrite the current save file is made to overwrite the current save file is made
based on either the maximization or the based on either the maximization or the
minimization of the monitored quantity. For `val_acc`, minimization of the monitored quantity. For `val_acc`,
this should be `max`, for `val_loss` this should this should be `max`, for `val_loss` this should
be `min`, etc. In `auto` mode, the direction is be `min`, etc. In `auto` mode, the direction is
automatically inferred from the name of the monitored quantity. automatically inferred from the name of the monitored quantity.
save_weights_only (bool): if True, then only the model's weights will be save_weights_only: if True, then only the model's weights will be
saved (`model.save_weights(filepath)`), else the full model saved (`model.save_weights(filepath)`), else the full model
is saved (`model.save(filepath)`). is saved (`model.save(filepath)`).
period (int): Interval (number of epochs) between checkpoints. period: Interval (number of epochs) between checkpoints.
Example::
from pytorch_lightning import Trainer
from pytorch_lightning.callbacks import ModelCheckpoint
checkpoint_callback = ModelCheckpoint(filepath='my_path')
Trainer(checkpoint_callback=checkpoint_callback)
# saves checkpoints to my_path whenever 'val_loss' has a new min
""" """
def __init__(self, filepath, monitor='val_loss', verbose=0, def __init__(self, filepath, monitor='val_loss', verbose=0,
save_top_k=1, save_weights_only=False, save_best_only=False, save_weights_only=False,
mode='auto', period=1, prefix=''): mode='auto', period=1, prefix=''):
super(ModelCheckpoint, self).__init__() super(ModelCheckpoint, self).__init__()
if (
save_top_k and
os.path.isdir(filepath) and
len(os.listdir(filepath)) > 0
):
warnings.warn(
f"Checkpoint directory {filepath} exists and is not empty with save_top_k != 0."
"All files in this directory will be deleted when a checkpoint is saved!"
)
self.monitor = monitor self.monitor = monitor
self.verbose = verbose self.verbose = verbose
self.filepath = filepath self.filepath = filepath
os.makedirs(filepath, exist_ok=True) self.save_best_only = save_best_only
self.save_top_k = save_top_k
self.save_weights_only = save_weights_only self.save_weights_only = save_weights_only
self.period = period self.period = period
self.epochs_since_last_check = 0 self.epochs_since_last_save = 0
self.prefix = prefix self.prefix = prefix
self.best_k_models = {}
# {filename: monitor}
self.kth_best_model = ''
self.best = 0
if mode not in ['auto', 'min', 'max']: if mode not in ['auto', 'min', 'max']:
warnings.warn( print('ModelCheckpoint mode %s is unknown, '
f'ModelCheckpoint mode {mode} is unknown, ' 'fallback to auto mode.' % (mode), RuntimeWarning)
'fallback to auto mode.', RuntimeWarning)
mode = 'auto' mode = 'auto'
if mode == 'min': if mode == 'min':
self.monitor_op = np.less self.monitor_op = np.less
self.kth_value = np.Inf self.best = np.Inf
self.mode = 'min'
elif mode == 'max': elif mode == 'max':
self.monitor_op = np.greater self.monitor_op = np.greater
self.kth_value = -np.Inf self.best = -np.Inf
self.mode = 'max'
else: else:
if 'acc' in self.monitor or self.monitor.startswith('fmeasure'): if 'acc' in self.monitor or self.monitor.startswith('fmeasure'):
self.monitor_op = np.greater self.monitor_op = np.greater
self.kth_value = -np.Inf self.best = -np.Inf
self.mode = 'max'
else: else:
self.monitor_op = np.less self.monitor_op = np.less
self.kth_value = np.Inf self.best = np.Inf
self.mode = 'min'
def _del_model(self, filepath): def save_model(self, filepath, overwrite):
dirpath = os.path.dirname(filepath) dirpath = '/'.join(filepath.split('/')[:-1])
# make paths # make paths
os.makedirs(dirpath, exist_ok=True) os.makedirs(os.path.dirname(filepath), exist_ok=True)
try: if overwrite:
shutil.rmtree(filepath) for filename in os.listdir(dirpath):
except OSError: if self.prefix in filename:
os.remove(filepath) path_to_delete = os.path.join(dirpath, filename)
try:
def _save_model(self, filepath): shutil.rmtree(path_to_delete)
dirpath = os.path.dirname(filepath) except OSError:
os.remove(path_to_delete)
# make paths
os.makedirs(dirpath, exist_ok=True)
# delegate the saving to the model # delegate the saving to the model
self.save_function(filepath) self.save_function(filepath)
def check_monitor_top_k(self, current):
less_than_k_models = len(self.best_k_models.keys()) < self.save_top_k
if less_than_k_models:
return True
return self.monitor_op(current, self.best_k_models[self.kth_best_model])
def on_epoch_end(self, epoch, logs=None): def on_epoch_end(self, epoch, logs=None):
logs = logs or {} logs = logs or {}
self.epochs_since_last_check += 1 self.epochs_since_last_save += 1
if self.epochs_since_last_save >= self.period:
if self.save_top_k == 0: self.epochs_since_last_save = 0
# no models are saved filepath = '{}/{}_ckpt_epoch_{}.ckpt'.format(self.filepath, self.prefix, epoch + 1)
return if self.save_best_only:
if self.epochs_since_last_check >= self.period:
self.epochs_since_last_check = 0
filepath = f'{self.filepath}/{self.prefix}_ckpt_epoch_{epoch}.ckpt'
version_cnt = 0
while os.path.isfile(filepath):
# this epoch called before
filepath = f'{self.filepath}/{self.prefix}_ckpt_epoch_{epoch}_v{version_cnt}.ckpt'
version_cnt += 1
if self.save_top_k != -1:
current = logs.get(self.monitor) current = logs.get(self.monitor)
if current is None: if current is None:
warnings.warn( print('Can save best model only with %s available,'
f'Can save best model only with {self.monitor} available,' ' skipping.' % (self.monitor), RuntimeWarning)
' skipping.', RuntimeWarning)
else: else:
if self.check_monitor_top_k(current): if self.monitor_op(current, self.best):
# remove kth
if len(self.best_k_models.keys()) == self.save_top_k:
delpath = self.kth_best_model
self.best_k_models.pop(self.kth_best_model)
self._del_model(delpath)
self.best_k_models[filepath] = current
if len(self.best_k_models.keys()) == self.save_top_k:
# monitor dict has reached k elements
if self.mode == 'min':
self.kth_best_model = max(self.best_k_models, key=self.best_k_models.get)
else:
self.kth_best_model = min(self.best_k_models, key=self.best_k_models.get)
self.kth_value = self.best_k_models[self.kth_best_model]
if self.mode == 'min':
self.best = min(self.best_k_models.values())
else:
self.best = max(self.best_k_models.values())
if self.verbose > 0: if self.verbose > 0:
logging.info( print('\nEpoch %05d: %s improved from %0.5f to %0.5f,'
f'\nEpoch {epoch:05d}: {self.monitor} reached' ' saving model to %s'
f' {current:0.5f} (best {self.best:0.5f}), saving model to' % (epoch + 1, self.monitor, self.best,
f' {filepath} as top {self.save_top_k}') current, filepath))
self._save_model(filepath) self.best = current
self.save_model(filepath, overwrite=True)
else: else:
if self.verbose > 0: if self.verbose > 0:
logging.info( print('\nEpoch %05d: %s did not improve' %
f'\nEpoch {epoch:05d}: {self.monitor}' (epoch + 1, self.monitor))
f' was not in top {self.save_top_k}')
else: else:
if self.verbose > 0: if self.verbose > 0:
logging.info(f'\nEpoch {epoch:05d}: saving model to {filepath}') print('\nEpoch %05d: saving model to %s' % (epoch + 1, filepath))
self._save_model(filepath) self.save_model(filepath, overwrite=False)
class GradientAccumulationScheduler(Callback): class GradientAccumulationScheduler(Callback):
r""" """Change gradient accumulation factor according to scheduling.
Change gradient accumulation factor according to scheduling. # Arguments
scheduling: dict, scheduling in format {epoch: accumulation_factor}
Args:
scheduling (dict): scheduling in format {epoch: accumulation_factor}
Example::
from pytorch_lightning import Trainer
from pytorch_lightning.callbacks import GradientAccumulationScheduler
# at epoch 5 start accumulating every 2 batches
accumulator = GradientAccumulationScheduler(scheduling: {5: 2})
Trainer(accumulate_grad_batches=accumulator)
""" """
def __init__(self, scheduling: dict): def __init__(self, scheduling: dict):
if scheduling == {}: # empty dict error if scheduling == {}: # empty dict error
raise TypeError("Empty dict cannot be interpreted correct") raise TypeError("Empty dict cannot be interpreted correct")
@@ -396,11 +286,11 @@ class GradientAccumulationScheduler(Callback):
break break
# if __name__ == '__main__': if __name__ == '__main__':
# c = EarlyStopping(min_delta=0.9, patience=2, verbose=True) c = EarlyStopping(min_delta=0.9, patience=2, verbose=True)
# losses = [10, 9, 8, 8, 6, 4.3, 5, 4.4, 2.8, 2.5] losses = [10, 9, 8, 8, 6, 4.3, 5, 4.4, 2.8, 2.5]
# for i, loss in enumerate(losses): for i, loss in enumerate(losses):
# should_stop = c.on_epoch_end(i, logs={'val_loss': loss}) should_stop = c.on_epoch_end(i, logs={'val_loss': loss})
# logging.info(loss) print(loss)
# if should_stop: if should_stop:
# break break
-100
View File
@@ -1,100 +0,0 @@
"""
A LightningModule is a strict superclass of torch.nn.Module but provides an interface to standardize
the "ingredients" for a research or production system.
- The model/system definition (__init__)
- The model/system computations (forward)
- What happens in the training loop (training_step, training_end)
- What happens in the validation loop (validation_step, validation_end)
- What happens in the test loop (test_step, test_end)
- What optimizers to use (configure_optimizers)
- What data to use (train_dataloader, val_dataloader, test_dataloader)
Most methods are optional. Here's a minimal example.
.. code-block:: python
import os
import torch
from torch.nn import functional as F
from torch.utils.data import DataLoader
from torchvision.datasets import MNIST
import torchvision.transforms as transforms
import pytorch_lightning as pl
class CoolModel(pl.LightningModule):
def __init__(self):
super(CoolModel, self).__init__()
self.l1 = torch.nn.Linear(28 * 28, 10)
def forward(self, x):
return torch.relu(self.l1(x.view(x.size(0), -1)))
def training_step(self, batch, batch_idx):
x, y = batch
y_hat = self.forward(x)
return {'loss': F.cross_entropy(y_hat, y)}
def validation_step(self, batch, batch_idx):
# OPTIONAL
x, y = batch
y_hat = self.forward(x)
return {'val_loss': F.cross_entropy(y_hat, y)}
def validation_end(self, outputs):
# OPTIONAL
val_loss_mean = torch.stack([x['val_loss'] for x in outputs]).mean()
return {'val_loss': val_loss_mean}
def test_step(self, batch, batch_idx):
# OPTIONAL
x, y = batch
y_hat = self.forward(x)
return {'test_loss': F.cross_entropy(y_hat, y)}
def test_end(self, outputs):
# OPTIONAL
test_loss_mean = torch.stack([x['test_loss'] for x in outputs]).mean()
return {'test_loss': test_loss_mean}
def configure_optimizers(self):
# REQUIRED
return torch.optim.Adam(self.parameters(), lr=0.02)
@pl.data_loader
def train_dataloader(self):
return DataLoader(MNIST(os.getcwd(), train=True, download=True,
transform=transforms.ToTensor()), batch_size=32)
@pl.data_loader
def val_dataloader(self):
# OPTIONAL
# can also return a list of val dataloaders
return DataLoader(MNIST(os.getcwd(), train=True, download=True,
transform=transforms.ToTensor()), batch_size=32)
@pl.data_loader
def test_dataloader(self):
# OPTIONAL
# can also return a list of test dataloaders
return DataLoader(MNIST(os.getcwd(), train=False, download=True,
transform=transforms.ToTensor()), batch_size=32)
Once you've defined the LightningModule, fit it using a trainer.
.. code-block:: python
trainer = pl.Trainer()
model = CoolModel()
trainer.fit(model)
Check out this
`COLAB <https://colab.research.google.com/drive/1F_RNcHzTfFuQf-LeKvSlud6x7jXYkG31#scrollTo=HOk9c4_35FKg>`_
for a live demo.
"""
from .lightning import LightningModule
__all__ = ['LightningModule']
-154
View File
@@ -1,154 +0,0 @@
"""
Hooks
=====
There are cases when you might want to do something different at different parts of the training/validation loop.
To enable a hook, simply override the method in your LightningModule and the trainer will call it at the correct time.
**Contributing** If there's a hook you'd like to add, simply:
1. Fork PyTorchLightning.
2. Add the hook :py:mod:`pytorch_lightning.base_module.hooks.py`.
3. Add the correct place in the :py:mod:`pytorch_lightning.models.trainer` where it should be called.
"""
import torch
try:
from apex import amp
APEX_AVAILABLE = True
except ImportError:
APEX_AVAILABLE = False
class ModelHooks(torch.nn.Module):
def on_sanity_check_start(self):
"""
Called before starting evaluate
.. warning:: will be deprecated.
:return:
"""
pass
def on_train_start(self):
"""Called at the beginning of training before sanity check
:return:
"""
# do something at the start of training
pass
def on_train_end(self):
"""
Called at the end of training before logger experiment is closed
:return:
"""
# do something at the end of training
pass
def on_batch_start(self, batch):
"""Called in the training loop before anything happens for that batch.
:param batch:
:return:
"""
# do something when the batch starts
pass
def on_batch_end(self):
"""Called in the training loop after the batch."""
# do something when the batch ends
pass
def on_epoch_start(self):
"""Called in the training loop at the very beginning of the epoch."""
# do something when the epoch starts
pass
def on_epoch_end(self):
"""Called in the training loop at the very end of the epoch."""
# do something when the epoch ends
pass
def on_pre_performance_check(self):
"""Called at the very beginning of the validation loop."""
# do something before validation starts
pass
def on_post_performance_check(self):
"""Called at the very end of the validation loop."""
# do something before validation end
pass
def on_before_zero_grad(self, optimizer):
"""Called after optimizer.step() and before optimizer.zero_grad()
Called in the training loop after taking an optimizer step and before zeroing grads.
Good place to inspect weight information with weights updated.
for optimizer in optimizers::
optimizer.step()
model.on_before_zero_grad(optimizer) # < ---- called here
optimizer.zero_grad
:param optimizer:
:return:
"""
# do something with the optimizer or inspect it.
pass
def on_after_backward(self):
"""Called after loss.backward() and before optimizers do anything.
:return:
Called in the training loop after model.backward()
This is the ideal place to inspect or log gradient information
.. code-block:: python
def on_after_backward(self):
# example to inspect gradient information in tensorboard
if self.trainer.global_step % 25 == 0: # don't make the tf file huge
params = self.state_dict()
for k, v in params.items():
grads = v
name = k
self.logger.experiment.add_histogram(tag=name, values=grads,
global_step=self.trainer.global_step)
"""
pass
def backward(self, use_amp, loss, optimizer):
"""Override backward with your own implementation if you need to
:param use_amp: Whether amp was requested or not
:param loss: Loss is already scaled by accumulated grads
:param optimizer: Current optimizer being used
:return:
Called to perform backward step.
Feel free to override as needed.
The loss passed in has already been scaled for accumulated gradients if requested.
.. code-block:: python
def backward(self, use_amp, loss, optimizer):
if use_amp:
with amp.scale_loss(loss, optimizer) as scaled_loss:
scaled_loss.backward()
else:
loss.backward()
"""
if use_amp:
with amp.scale_loss(loss, optimizer) as scaled_loss:
scaled_loss.backward()
else:
loss.backward()
File diff suppressed because it is too large Load Diff
-10
View File
@@ -1,10 +0,0 @@
"""
.. warning:: `model_saving` module has been renamed to `saving` since v0.6.0 and will be removed in v0.8.0
"""
import warnings
warnings.warn("`model_saving` module has been renamed to `saving` since v0.6.0"
" and will be removed in v0.8.0", DeprecationWarning)
from pytorch_lightning.core.saving import ModelIO # noqa: E402
-8
View File
@@ -1,8 +0,0 @@
"""
.. warning:: `root_module` module has been renamed to `lightning` since v0.6.0 and will be removed in v0.8.0
"""
import warnings
warnings.warn("`root_module` module has been renamed to `lightning` since v0.6.0"
" and will be removed in v0.8.0", DeprecationWarning)
-34
View File
@@ -1,34 +0,0 @@
class ModelIO(object):
def on_load_checkpoint(self, checkpoint):
"""
Do something with the checkpoint
Gives model a chance to load something before state_dict is restored
:param checkpoint:
:return:
"""
pass
def on_save_checkpoint(self, checkpoint):
"""
Give the model a chance to add something to the checkpoint.
state_dict is already there
"""
pass
# -------------------------
# OPTIONAL HOOKS
# -------------------------
def on_hpc_save(self, checkpoint):
"""
Hook to do whatever you need right before Slurm manager saves the model
:return:
"""
pass
def on_hpc_load(self, checkpoint):
"""
Hook to do whatever you need right before Slurm manager loads the model
:return:
"""
pass
-116
View File
@@ -1,116 +0,0 @@
"""
Lightning supports most popular logging frameworks (Tensorboard, comet, weights and biases, etc...).
To use a logger, simply pass it into the trainer.
.. code-block:: python
from pytorch_lightning import logging
# lightning uses tensorboard by default
tb_logger = logging.TensorBoardLogger()
trainer = Trainer(logger=tb_logger)
# or choose from any of the others such as MLFlow, Comet, Neptune, Wandb
comet_logger = logging.CometLogger()
trainer = Trainer(logger=comet_logger)
.. note:: All loggers log by default to `os.getcwd()`. To change the path without creating a logger set
Trainer(default_save_path='/your/path/to/save/checkpoints')
Custom logger
-------------
You can implement your own logger by writing a class that inherits from
`LightningLoggerBase`. Use the `rank_zero_only` decorator to make sure that
only the first process in DDP training logs data.
.. code-block:: python
from pytorch_lightning.logging import LightningLoggerBase, rank_zero_only
class MyLogger(LightningLoggerBase):
@rank_zero_only
def log_hyperparams(self, params):
# params is an argparse.Namespace
# your code to record hyperparameters goes here
pass
@rank_zero_only
def log_metrics(self, metrics, step):
# metrics is a dictionary of metric names and values
# your code to record metrics goes here
pass
def save(self):
# Optional. Any code necessary to save logger data goes here
pass
@rank_zero_only
def finalize(self, status):
# Optional. Any code that needs to be run after training
# finishes goes here
If you write a logger than may be useful to others, please send
a pull request to add it to Lighting!
Using loggers
-------------
Call the logger anywhere from your LightningModule by doing:
.. code-block:: python
def train_step(...):
# example
self.logger.experiment.whatever_method_summary_writer_supports(...)
def any_lightning_module_function_or_hook(...):
self.logger.experiment.add_histogram(...)
Supported Loggers
-----------------
"""
from os import environ
from .base import LightningLoggerBase, rank_zero_only
from .tensorboard import TensorBoardLogger
all = []
try:
# needed to prevent ImportError and duplicated logs.
environ["COMET_DISABLE_AUTO_LOGGING"] = "1"
from .comet import CometLogger
all.append('CometLogger')
except ImportError:
del environ["COMET_DISABLE_AUTO_LOGGING"]
try:
from .mlflow import MLFlowLogger
all.append('MLFlowLogger')
except ImportError:
pass
try:
from .neptune import NeptuneLogger
all.append('NeptuneLogger')
except ImportError:
pass
all.append('TensorBoardLogger')
try:
from .test_tube import TestTubeLogger
all.append('TestTubeLogger')
except ImportError:
pass
try:
from .wandb import WandbLogger
all.append('WandbLogger')
except ImportError:
pass
__all__ = all
-77
View File
@@ -1,77 +0,0 @@
from abc import ABC
from functools import wraps
def rank_zero_only(fn):
"""Decorate a logger method to run it only on the process with rank 0.
:param fn: Function to decorate
"""
@wraps(fn)
def wrapped_fn(self, *args, **kwargs):
if self.rank == 0:
fn(self, *args, **kwargs)
return wrapped_fn
class LightningLoggerBase(ABC):
"""Base class for experiment loggers."""
def __init__(self):
self._rank = 0
@property
def experiment(self):
raise NotImplementedError()
def log_metrics(self, metrics, step):
"""Record metrics.
:param float metric: Dictionary with metric names as keys and measured quanties as values
:param int|None step: Step number at which the metrics should be recorded
"""
raise NotImplementedError()
def log_hyperparams(self, params):
"""Record hyperparameters.
:param params: argparse.Namespace containing the hyperparameters
"""
raise NotImplementedError()
def save(self):
"""Save log data."""
pass
def finalize(self, status):
"""Do any processing that is necessary to finalize an experiment.
:param status: Status that the experiment finished with (e.g. success, failed, aborted)
"""
pass
def close(self):
"""Do any cleanup that is necessary to close an experiment."""
pass
@property
def rank(self):
"""Process rank. In general, metrics should only be logged by the process with rank 0."""
return self._rank
@rank.setter
def rank(self, value):
"""Set the process rank."""
self._rank = value
@property
def name(self):
"""Return the experiment name."""
raise NotImplementedError("Sub-classes must provide a name property")
@property
def version(self):
"""Return the experiment version."""
raise NotImplementedError("Sub-classes must provide a version property")
-170
View File
@@ -1,170 +0,0 @@
from logging import getLogger
try:
from comet_ml import Experiment as CometExperiment
from comet_ml import OfflineExperiment as CometOfflineExperiment
try:
from comet_ml.api import API
except ImportError:
# For more information, see: https://www.comet.ml/docs/python-sdk/releases/#release-300
from comet_ml.papi import API
except ImportError:
raise ImportError('Missing comet_ml package.')
from torch import is_tensor
from .base import LightningLoggerBase, rank_zero_only
from ..utilities.debugging import MisconfigurationException
logger = getLogger(__name__)
class CometLogger(LightningLoggerBase):
def __init__(self, api_key=None, save_dir=None, workspace=None,
rest_api_key=None, project_name=None, experiment_name=None, **kwargs):
r"""
Log using `comet <https://www.comet.ml>`_.
Requires either an API Key (online mode) or a local directory path (offline mode)
.. code-block:: python
# ONLINE MODE
from pytorch_lightning.logging import CometLogger
# arguments made to CometLogger are passed on to the comet_ml.Experiment class
comet_logger = CometLogger(
api_key=os.environ["COMET_KEY"],
workspace=os.environ["COMET_WORKSPACE"], # Optional
project_name="default_project", # Optional
rest_api_key=os.environ["COMET_REST_KEY"], # Optional
experiment_name="default" # Optional
)
trainer = Trainer(logger=comet_logger)
.. code-block:: python
# OFFLINE MODE
from pytorch_lightning.logging import CometLogger
# arguments made to CometLogger are passed on to the comet_ml.Experiment class
comet_logger = CometLogger(
save_dir=".",
workspace=os.environ["COMET_WORKSPACE"], # Optional
project_name="default_project", # Optional
rest_api_key=os.environ["COMET_REST_KEY"], # Optional
experiment_name="default" # Optional
)
trainer = Trainer(logger=comet_logger)
Args:
api_key (str): Required in online mode. API key, found on Comet.ml
save_dir (str): Required in offline mode. The path for the directory to save local comet logs
workspace (str): Optional. Name of workspace for this user
project_name (str): Optional. Send your experiment to a specific project.
Otherwise will be sent to Uncategorized Experiments.
If project name does not already exists Comet.ml will create a new project.
rest_api_key (str): Optional. Rest API key found in Comet.ml settings.
This is used to determine version number
experiment_name (str): Optional. String representing the name for this particular experiment on Comet.ml
"""
super().__init__()
self._experiment = None
# Determine online or offline mode based on which arguments were passed to CometLogger
if save_dir is not None and api_key is not None:
# If arguments are passed for both save_dir and api_key, preference is given to online mode
self.mode = "online"
self.api_key = api_key
elif api_key is not None:
self.mode = "online"
self.api_key = api_key
elif save_dir is not None:
self.mode = "offline"
self.save_dir = save_dir
else:
# If neither api_key nor save_dir are passed as arguments, raise an exception
raise MisconfigurationException("CometLogger requires either api_key or save_dir during initialization.")
logger.info(f"CometLogger will be initialized in {self.mode} mode")
self.workspace = workspace
self.project_name = project_name
self._kwargs = kwargs
if rest_api_key is not None:
# Comet.ml rest API, used to determine version number
self.rest_api_key = rest_api_key
self.comet_api = API(self.rest_api_key)
else:
self.rest_api_key = None
self.comet_api = None
if experiment_name:
try:
self.name = experiment_name
except TypeError as e:
logger.exception("Failed to set experiment name for comet.ml logger")
@property
def experiment(self):
r"""
Actual comet object. To use comet features do the following.
Example::
self.logger.experiment.some_comet_function()
"""
if self._experiment is not None:
return self._experiment
if self.mode == "online":
self._experiment = CometExperiment(
api_key=self.api_key,
workspace=self.workspace,
project_name=self.project_name,
**self._kwargs
)
else:
self._experiment = CometOfflineExperiment(
offline_directory=self.save_dir,
workspace=self.workspace,
project_name=self.project_name,
**self._kwargs
)
return self._experiment
@rank_zero_only
def log_hyperparams(self, params):
self.experiment.log_parameters(vars(params))
@rank_zero_only
def log_metrics(self, metrics, step=None):
# Comet.ml expects metrics to be a dictionary of detached tensors on CPU
for key, val in metrics.items():
if is_tensor(val):
metrics[key] = val.cpu().detach()
self.experiment.log_metrics(metrics, step=step)
@rank_zero_only
def finalize(self, status):
self.experiment.end()
@property
def name(self):
return self.experiment.project_name
@name.setter
def name(self, value):
self.experiment.set_name(value)
@property
def version(self):
return self.experiment.id
-10
View File
@@ -1,10 +0,0 @@
"""
.. warning:: `comet_logger` module has been renamed to `comet` since v0.6.0 and will be removed in v0.8.0
"""
import warnings
warnings.warn("`comet_logger` module has been renamed to `comet` since v0.6.0"
" and will be removed in v0.8.0", DeprecationWarning)
from pytorch_lightning.logging.comet import CometLogger # noqa: E402
-118
View File
@@ -1,118 +0,0 @@
"""
Log using `mlflow <https://mlflow.org>'_
.. code-block:: python
from pytorch_lightning.logging import MLFlowLogger
mlf_logger = MLFlowLogger(
experiment_name="default",
tracking_uri="file:/."
)
trainer = Trainer(logger=mlf_logger)
Use the logger anywhere in you LightningModule as follows:
.. code-block:: python
def train_step(...):
# example
self.logger.experiment.whatever_ml_flow_supports(...)
def any_lightning_module_function_or_hook(...):
self.logger.experiment.whatever_ml_flow_supports(...)
"""
from logging import getLogger
from time import time
try:
import mlflow
except ImportError:
raise ImportError('Missing mlflow package.')
from .base import LightningLoggerBase, rank_zero_only
logger = getLogger(__name__)
class MLFlowLogger(LightningLoggerBase):
def __init__(self, experiment_name, tracking_uri=None, tags=None):
r"""
Logs using MLFlow
Args:
experiment_name (str): The name of the experiment
tracking_uri (str): where this should track
tags (dict): todo this param
"""
super().__init__()
self._mlflow_client = mlflow.tracking.MlflowClient(tracking_uri)
self.experiment_name = experiment_name
self._run_id = None
self.tags = tags
@property
def experiment(self):
r"""
Actual mlflow object. To use mlflow features do the following.
Example::
self.logger.experiment.some_mlflow_function()
"""
return self._mlflow_client
@property
def run_id(self):
if self._run_id is not None:
return self._run_id
expt = self._mlflow_client.get_experiment_by_name(self.experiment_name)
if expt:
self._expt_id = expt.experiment_id
else:
logger.warning(f"Experiment with name {self.experiment_name} not found. Creating it.")
self._expt_id = self._mlflow_client.create_experiment(name=self.experiment_name)
run = self._mlflow_client.create_run(experiment_id=self._expt_id, tags=self.tags)
self._run_id = run.info.run_id
return self._run_id
@rank_zero_only
def log_hyperparams(self, params):
for k, v in vars(params).items():
self.experiment.log_param(self.run_id, k, v)
@rank_zero_only
def log_metrics(self, metrics, step=None):
timestamp_ms = int(time() * 1000)
for k, v in metrics.items():
if isinstance(v, str):
logger.warning(
f"Discarding metric with string value {k}={v}"
)
continue
self.experiment.log_metric(self.run_id, k, v, timestamp_ms, step)
def save(self):
pass
@rank_zero_only
def finalize(self, status="FINISHED"):
if status == 'success':
status = 'FINISHED'
self.experiment.set_terminated(self.run_id, status)
@property
def name(self):
return self.experiment_name
@property
def version(self):
return self._run_id
@@ -1,10 +0,0 @@
"""
.. warning:: `mlflow_logger` module has been renamed to `mlflow` since v0.6.0 and will be removed in v0.8.0
"""
import warnings
warnings.warn("`mlflow_logger` module has been renamed to `mlflow` since v0.6.0"
" and will be removed in v0.8.0", DeprecationWarning)
from pytorch_lightning.logging.mlflow import MLFlowLogger # noqa: E402
-286
View File
@@ -1,286 +0,0 @@
"""
Log using `neptune <https://www.neptune.ml>`_
Neptune logger can be used in the online mode or offline (silent) mode.
To log experiment data in online mode, NeptuneLogger requries an API key:
.. code-block:: python
from pytorch_lightning.logging import NeptuneLogger
# arguments made to NeptuneLogger are passed on to the neptune.experiments.Experiment class
neptune_logger = NeptuneLogger(
api_key=os.environ["NEPTUNE_API_TOKEN"],
project_name="USER_NAME/PROJECT_NAME",
experiment_name="default", # Optional,
params={"max_epochs": 10}, # Optional,
tags=["pytorch-lightning","mlp"] # Optional,
)
trainer = Trainer(max_epochs=10, logger=neptune_logger)
Use the logger anywhere in you LightningModule as follows:
.. code-block:: python
def train_step(...):
# example
self.logger.experiment.log_metric("acc_train", acc_train) # log metrics
self.logger.experiment.log_image("worse_predictions", prediction_image) # log images
self.logger.experiment.log_artifact("model_checkpoint.pt", prediction_image) # log model checkpoint
self.logger.experiment.whatever_neptune_supports(...)
def any_lightning_module_function_or_hook(...):
self.logger.experiment.log_metric("acc_train", acc_train) # log metrics
self.logger.experiment.log_image("worse_predictions", prediction_image) # log images
self.logger.experiment.log_artifact("model_checkpoint.pt", prediction_image) # log model checkpoint
self.logger.experiment.whatever_neptune_supports(...)
"""
from logging import getLogger
try:
import neptune
except ImportError:
raise ImportError('Missing neptune package. Run `pip install neptune-client`')
from torch import is_tensor
# from .base import LightningLoggerBase, rank_zero_only
from pytorch_lightning.logging.base import LightningLoggerBase, rank_zero_only
logger = getLogger(__name__)
class NeptuneLogger(LightningLoggerBase):
def __init__(self, api_key=None, project_name=None, offline_mode=False,
experiment_name=None, upload_source_files=None,
params=None, properties=None, tags=None, **kwargs):
r"""
Initialize a neptune.ml logger.
.. note:: Requires either an API Key (online mode) or a local directory path (offline mode)
.. code-block:: python
# ONLINE MODE
from pytorch_lightning.logging import NeptuneLogger
# arguments made to NeptuneLogger are passed on to the neptune.experiments.Experiment class
neptune_logger = NeptuneLogger(
api_key=os.environ["NEPTUNE_API_TOKEN"],
project_name="USER_NAME/PROJECT_NAME",
experiment_name="default", # Optional,
params={"max_epochs": 10}, # Optional,
tags=["pytorch-lightning","mlp"] # Optional,
)
trainer = Trainer(max_epochs=10, logger=neptune_logger)
.. code-block:: python
# OFFLINE MODE
from pytorch_lightning.logging import NeptuneLogger
# arguments made to NeptuneLogger are passed on to the neptune.experiments.Experiment class
neptune_logger = NeptuneLogger(
project_name="USER_NAME/PROJECT_NAME",
experiment_name="default", # Optional,
params={"max_epochs": 10}, # Optional,
tags=["pytorch-lightning","mlp"] # Optional,
)
trainer = Trainer(max_epochs=10, logger=neptune_logger)
Args:
api_key (str | None): Required in online mode. Neputne API token, found on https://neptune.ml.
Read how to get your API key
https://docs.neptune.ml/python-api/tutorials/get-started.html#copy-api-token.
project_name (str): Required in online mode. Qualified name of a project in a form of
"namespace/project_name" for example "tom/minst-classification".
If None, the value of NEPTUNE_PROJECT environment variable will be taken.
You need to create the project in https://neptune.ml first.
offline_mode (bool): Optional default False. If offline_mode=True no logs will be send to neptune.
Usually used for debug purposes.
experiment_name (str|None): Optional. Editable name of the experiment.
Name is displayed in the experiments Details (Metadata section) and in experiments view as a column.
upload_source_files (list|None): Optional. List of source files to be uploaded.
Must be list of str or single str. Uploaded sources are displayed in the experiments Source code tab.
If None is passed, Python file from which experiment was created will be uploaded.
Pass empty list ([]) to upload no files. Unix style pathname pattern expansion is supported.
For example, you can pass '*.py' to upload all python source files from the current directory.
For recursion lookup use '**/*.py' (for Python 3.5 and later). For more information see glob library.
params (dict|None): Optional. Parameters of the experiment. After experiment creation params are read-only.
Parameters are displayed in the experiments Parameters section and each key-value pair can be
viewed in experiments view as a column.
properties (dict|None): Optional default is {}. Properties of the experiment.
They are editable after experiment is created. Properties are displayed in the experiments Details and
each key-value pair can be viewed in experiments view as a column.
tags (list|None): Optional default []. Must be list of str. Tags of the experiment.
They are editable after experiment is created (see: append_tag() and remove_tag()).
Tags are displayed in the experiments Details and can be viewed in experiments view as a column.
"""
super().__init__()
self.api_key = api_key
self.project_name = project_name
self.offline_mode = offline_mode
self.experiment_name = experiment_name
self.upload_source_files = upload_source_files
self.params = params
self.properties = properties
self.tags = tags
self._experiment = None
self._kwargs = kwargs
if offline_mode:
self.mode = "offline"
neptune.init(project_qualified_name='dry-run/project',
backend=neptune.OfflineBackend())
else:
self.mode = "online"
neptune.init(api_token=self.api_key,
project_qualified_name=self.project_name)
logger.info(f"NeptuneLogger was initialized in {self.mode} mode")
@property
def experiment(self):
r"""
Actual neptune object. To use neptune features do the following.
Example::
self.logger.experiment.some_neptune_function()
"""
if self._experiment is not None:
return self._experiment
else:
self._experiment = neptune.create_experiment(name=self.experiment_name,
params=self.params,
properties=self.properties,
tags=self.tags,
upload_source_files=self.upload_source_files,
**self._kwargs)
return self._experiment
@rank_zero_only
def log_hyperparams(self, params):
for key, val in vars(params).items():
self.experiment.set_property(f"param__{key}", val)
@rank_zero_only
def log_metrics(self, metrics, step=None):
"""Log metrics (numeric values) in Neptune experiments
:param float metric: Dictionary with metric names as keys and measured quanties as values
:param int|None step: Step number at which the metrics should be recorded, must be strictly increasing
"""
for key, val in metrics.items():
if is_tensor(val):
val = val.cpu().detach()
if step is None:
self.experiment.log_metric(key, val)
else:
self.experiment.log_metric(key, x=step, y=val)
@rank_zero_only
def finalize(self, status):
self.experiment.stop()
@property
def name(self):
if self.mode == "offline":
return "offline-name"
else:
return self.experiment.name
@property
def version(self):
if self.mode == "offline":
return "offline-id-1234"
else:
return self.experiment.id
@rank_zero_only
def log_metric(self, metric_name, metric_value, step=None):
"""Log metrics (numeric values) in Neptune experiments
:param str metric_name: The name of log, i.e. mse, loss, accuracy.
:param str metric_value: The value of the log (data-point).
:param int|None step: Step number at which the metrics should be recorded, must be strictly increasing
"""
if step is None:
self.experiment.log_metric(metric_name, metric_value)
else:
self.experiment.log_metric(metric_name, x=step, y=metric_value)
@rank_zero_only
def log_text(self, log_name, text, step=None):
"""Log text data in Neptune experiment
:param str log_name: The name of log, i.e. mse, my_text_data, timing_info.
:param str text: The value of the log (data-point).
:param int|None step: Step number at which the metrics should be recorded, must be strictly increasing
"""
if step is None:
self.experiment.log_metric(log_name, text)
else:
self.experiment.log_metric(log_name, x=step, y=text)
@rank_zero_only
def log_image(self, log_name, image, step=None):
"""Log image data in Neptune experiment
:param str log_name: The name of log, i.e. bboxes, visualisations, sample_images.
:param str|PIL.Image|matplotlib.figure.Figure image: The value of the log (data-point).
Can be one of the following types: PIL image, matplotlib.figure.Figure, path to image file (str)
:param int|None step: Step number at which the metrics should be recorded, must be strictly increasing
"""
if step is None:
self.experiment.log_image(log_name, image)
else:
self.experiment.log_image(log_name, x=step, y=image)
@rank_zero_only
def log_artifact(self, artifact, destination=None):
"""Save an artifact (file) in Neptune experiment storage.
:param str artifact: A path to the file in local filesystem.
:param str|None destination: Optional default None.
A destination path. If None is passed, an artifact file name will be used.
"""
self.experiment.log_artifact(artifact, destination)
@rank_zero_only
def set_property(self, key, value):
"""Set key-value pair as Neptune experiment property.
:param str key: Property key.
:param obj value: New value of a property.
"""
self.experiment.set_property(key, value)
@rank_zero_only
def append_tags(self, tags):
"""appends tags to neptune experiment
:param str|tuple|list(str) tags: Tags to add to the current experiment.
If str is passed, singe tag is added.
If multiple - comma separated - str are passed, all of them are added as tags.
If list of str is passed, all elements of the list are added as tags.
"""
if not isinstance(tags, (list, set, tuple)):
tags = [tags] # make it as an iterable is if it is not yet
self.experiment.append_tags(*tags)
-142
View File
@@ -1,142 +0,0 @@
import os
from warnings import warn
from argparse import Namespace
from pkg_resources import parse_version
import torch
import pandas as pd
from torch.utils.tensorboard import SummaryWriter
from .base import LightningLoggerBase, rank_zero_only
class TensorBoardLogger(LightningLoggerBase):
r"""
Log to local file system in TensorBoard format
Implemented using :class:`torch.utils.tensorboard.SummaryWriter`. Logs are saved to
`os.path.join(save_dir, name, version)`
Example
--------
.. code-block:: python
logger = TensorBoardLogger("tb_logs", name="my_model")
trainer = Trainer(logger=logger)
trainer.train(model)
Args:
save_dir (str): Save directory
name (str): Experiment name. Defaults to "default".
version (int): Experiment version. If version is not specified the logger inspects the save
directory for existing versions, then automatically assigns the next available version.
\**kwargs (dict): Other arguments are passed directly to the :class:`SummaryWriter` constructor.
"""
NAME_CSV_TAGS = 'meta_tags.csv'
def __init__(self, save_dir, name="default", version=None, **kwargs):
super().__init__()
self.save_dir = save_dir
self._name = name
self._version = version
self._experiment = None
self.tags = {}
self.kwargs = kwargs
@property
def experiment(self):
r"""
Actual tensorboard object. To use tensorboard features do the following.
Example::
self.logger.experiment.some_tensorboard_function()
"""
if self._experiment is not None:
return self._experiment
root_dir = os.path.join(self.save_dir, self.name)
os.makedirs(root_dir, exist_ok=True)
log_dir = os.path.join(root_dir, "version_" + str(self.version))
self._experiment = SummaryWriter(log_dir=log_dir, **self.kwargs)
return self._experiment
@rank_zero_only
def log_hyperparams(self, params):
if params is None:
return
# in case converting from namespace
if isinstance(params, Namespace):
params = vars(params)
params = dict(params)
if parse_version(torch.__version__) < parse_version("1.3.0"):
warn(
f"Hyperparameter logging is not available for Torch version {torch.__version__}."
" Skipping log_hyperparams. Upgrade to Torch 1.3.0 or above to enable"
" hyperparameter logging."
)
else:
# `add_hparams` requires both - hparams and metric
self.experiment.add_hparams(hparam_dict=params, metric_dict={})
# some alternative should be added
self.tags.update(params)
@rank_zero_only
def log_metrics(self, metrics, step=None):
for k, v in metrics.items():
if isinstance(v, torch.Tensor):
v = v.item()
self.experiment.add_scalar(k, v, step)
@rank_zero_only
def save(self):
try:
self.experiment.flush()
except AttributeError:
# you are using PT version (<v1.2) which does not have implemented flush
self.experiment._get_file_writer().flush()
# create a preudo standard path ala test-tube
dir_path = os.path.join(self.save_dir, self.name, 'version_%s' % self.version)
if not os.path.isdir(dir_path):
dir_path = self.save_dir
# prepare the file path
meta_tags_path = os.path.join(dir_path, self.NAME_CSV_TAGS)
# save the metatags file
df = pd.DataFrame({'key': list(self.tags.keys()),
'value': list(self.tags.values())})
df.to_csv(meta_tags_path, index=False)
@rank_zero_only
def finalize(self, status):
self.save()
@property
def name(self):
return self._name
@property
def version(self):
if self._version is None:
self._version = self._get_next_version()
return self._version
def _get_next_version(self):
root_dir = os.path.join(self.save_dir, self.name)
existing_versions = []
for d in os.listdir(root_dir):
if os.path.isdir(os.path.join(root_dir, d)) and d.startswith("version_"):
existing_versions.append(int(d.split("_")[1]))
if len(existing_versions) == 0:
return 0
else:
return max(existing_versions) + 1
-178
View File
@@ -1,178 +0,0 @@
"""
Log using `test tube <https://williamfalcon.github.io/test-tube>'_. Test tube logger is
a strict subclass of `PyTorch SummaryWriter <https://pytorch.org/docs/stable/tensorboard.html>`_, refer to their
documentation for all supported operations. The TestTubeLogger adds a nicer folder structure
to manage experiments and snapshots all hyperparameters you pass to a LightningModule.
.. code-block:: python
from pytorch_lightning.logging import TestTubeLogger
tt_logger = TestTubeLogger(
save_dir=".",
name="default",
debug=False,
create_git_tag=False
)
trainer = Trainer(logger=tt_logger)
Use the logger anywhere in you LightningModule as follows:
.. code-block:: python
def train_step(...):
# example
self.logger.experiment.whatever_method_summary_writer_supports(...)
def any_lightning_module_function_or_hook(...):
self.logger.experiment.add_histogram(...)
"""
try:
from test_tube import Experiment
except ImportError:
raise ImportError('Missing test-tube package.')
from .base import LightningLoggerBase, rank_zero_only
class TestTubeLogger(LightningLoggerBase):
r"""
Log to local file system in TensorBoard format but using a nicer folder structure.
Implemented using :class:`torch.utils.tensorboard.SummaryWriter`. Logs are saved to
`os.path.join(save_dir, name, version)`
Example
--------
.. code-block:: python
logger = TestTubeLogger("tt_logs", name="my_exp_name")
trainer = Trainer(logger=logger)
trainer.train(model)
Args:
save_dir (str): Save directory
name (str): Experiment name. Defaults to "default".
description (str): A short snippet about this experiment
debug (bool): If True, it doesn't log anything
version (int): Experiment version. If version is not specified the logger inspects the save
directory for existing versions, then automatically assigns the next available version.
create_git_tag (bool): If True creates a git tag to save the code used in this experiment
"""
__test__ = False
def __init__(
self, save_dir, name="default", description=None, debug=False,
version=None, create_git_tag=False
):
super().__init__()
self.save_dir = save_dir
self._name = name
self.description = description
self.debug = debug
self._version = version
self.create_git_tag = create_git_tag
self._experiment = None
@property
def experiment(self):
r"""
Actual test-tube object. To use test-tube features do the following.
Example::
self.logger.experiment.some_test_tube_function()
"""
if self._experiment is not None:
return self._experiment
self._experiment = Experiment(
save_dir=self.save_dir,
name=self._name,
debug=self.debug,
version=self.version,
description=self.description,
create_git_tag=self.create_git_tag,
rank=self.rank,
)
return self._experiment
@rank_zero_only
def log_hyperparams(self, params):
# TODO: HACK figure out where this is being set to true
self.experiment.debug = self.debug
self.experiment.argparse(params)
@rank_zero_only
def log_metrics(self, metrics, step=None):
# TODO: HACK figure out where this is being set to true
self.experiment.debug = self.debug
self.experiment.log(metrics, global_step=step)
@rank_zero_only
def save(self):
# TODO: HACK figure out where this is being set to true
self.experiment.debug = self.debug
self.experiment.save()
@rank_zero_only
def finalize(self, status):
# TODO: HACK figure out where this is being set to true
self.experiment.debug = self.debug
self.save()
self.close()
@rank_zero_only
def close(self):
# TODO: HACK figure out where this is being set to true
self.experiment.debug = self.debug
if not self.debug:
exp = self.experiment
exp.close()
@property
def rank(self):
return self._rank
@rank.setter
def rank(self, value):
self._rank = value
if self._experiment is not None:
self.experiment.rank = value
@property
def name(self):
if self._experiment is None:
return self._name
else:
return self.experiment.name
@property
def version(self):
if self._experiment is None:
return self._version
else:
return self.experiment.version
# Test tube experiments are not pickleable, so we need to override a few
# methods to get DDP working. See
# https://docs.python.org/3/library/pickle.html#handling-stateful-objects
# for more info.
def __getstate__(self):
state = self.__dict__.copy()
state["_experiment"] = self.experiment.get_meta_copy()
return state
def __setstate__(self, state):
self._experiment = state["_experiment"].get_non_ddp_exp()
del state["_experiment"]
self.__dict__.update(state)
@@ -1,10 +0,0 @@
"""
.. warning:: `test_tube_logger` module has been renamed to `test_tube` since v0.6.0 and will be removed in v0.8.0
"""
import warnings
warnings.warn("`test_tube_logger` module has been renamed to `test_tube` since v0.6.0"
" and will be removed in v0.8.0", DeprecationWarning)
from pytorch_lightning.logging.test_tube import TestTubeLogger # noqa: E402

Some files were not shown because too many files have changed in this diff Show More