Files
pytorch-ts/pts/model/forecast.py
T
2019-11-18 16:05:10 +01:00

406 lines
12 KiB
Python

from abc import ABC, abstractmethod
from enum import Enum
from typing import Dict, List, Optional, Set, Union
import numpy as np
import pandas as pd
import torch
from torch.distributions import Distribution
from .quantile import Quantile
class OutputType(str, Enum):
mean = "mean"
samples = "samples"
quantiles = "quantiles"
class Config:
output_types: Set[OutputType] = {"quantiles", "mean"}
quantiles: List[str] = ["0.1", "0.5", "0.9"]
class Forecast(ABC):
start_date: pd.Timestamp
freq: str
item_id: Optional[str]
info: Optional[Dict]
prediction_length: int
mean: np.ndarray
_index = None
@abstractmethod
def quantile(self, q: Union[float, str]) -> np.ndarray:
"""
Computes a quantile from the predicted distribution.
Parameters
----------
q
Quantile to compute.
Returns
-------
numpy.ndarray
Value of the quantile across the prediction range.
"""
pass
@abstractmethod
def dim(self) -> int:
"""
Returns the dimensionality of the forecast object.
"""
pass
@abstractmethod
def copy_dim(self, dim: int):
"""
Returns a new Forecast object with only the selected sub-dimension.
Parameters
----------
dim
The returned forecast object will only represent this dimension.
"""
pass
def as_json_dict(self, config: "Config") -> dict:
result = {}
if OutputType.mean in config.output_types:
result["mean"] = self.mean.tolist()
if OutputType.quantiles in config.output_types:
quantiles = map(Quantile.parse, config.quantiles)
result["quantiles"] = {
quantile.name: self.quantile(quantile.value).tolist()
for quantile in quantiles
}
if OutputType.samples in config.output_types:
result["samples"] = []
return result
class SampleForecast(Forecast):
"""
A `Forecast` object, where the predicted distribution is represented
internally as samples.
Parameters
----------
samples
Array of size (num_samples, prediction_length)
start_date
start of the forecast
freq
forecast frequency
info
additional information that the forecaster may provide e.g. estimated
parameters, number of iterations ran etc.
"""
def __init__(
self,
samples: Union[torch.Tensor, np.ndarray],
start_date,
freq,
item_id: Optional[str] = None,
info: Optional[Dict] = None,
):
assert isinstance(
samples, (np.ndarray, torch.Tensor)
), "samples should be either a numpy array or an torch tensor"
assert (
len(np.shape(samples)) == 2 or len(np.shape(samples)) == 3
), "samples should be a 2-dimensional or 3-dimensional array. Dimensions found: {}".format(
len(np.shape(samples))
)
self.samples = samples if (isinstance(samples, np.ndarray)) else samples.numpy()
self._sorted_samples_value = None
self._mean = None
self._dim = None
self.item_id = item_id
self.info = info
assert isinstance(
start_date, pd.Timestamp
), "start_date should be a pandas Timestamp object"
self.start_date = start_date
assert isinstance(freq, str), "freq should be a string"
self.freq = freq
@property
def _sorted_samples(self):
if self._sorted_samples_value is None:
self._sorted_samples_value = np.sort(self.samples, axis=0)
return self._sorted_samples_value
@property
def num_samples(self):
"""
The number of samples representing the forecast.
"""
return self.samples.shape[0]
@property
def prediction_length(self):
"""
Time length of the forecast.
"""
return self.samples.shape[-1]
@property
def mean(self):
"""
Forecast mean.
"""
if self._mean is not None:
return self._mean
else:
return np.mean(self.samples, axis=0)
@property
def mean_ts(self):
"""
Forecast mean, as a pandas.Series object.
"""
return pd.Series(self.index, self.mean)
def quantile(self, q):
q = Quantile.parse(q).value
sample_idx = int(np.round((self.num_samples - 1) * q))
return self._sorted_samples[sample_idx, :]
def copy_dim(self, dim: int):
if len(self.samples.shape) == 2:
samples = self.samples
else:
target_dim = self.samples.shape[2]
assert dim < target_dim, (
f"must set 0 <= dim < target_dim, but got dim={dim},"
f" target_dim={target_dim}"
)
samples = self.samples[:, :, dim]
return SampleForecast(
samples=samples,
start_date=self.start_date,
freq=self.freq,
item_id=self.item_id,
info=self.info,
)
def dim(self) -> int:
if self._dim is not None:
return self._dim
else:
if len(self.samples.shape) == 2:
# univariate target
# shape: (num_samples, prediction_length)
return 1
else:
# multivariate target
# shape: (num_samples, prediction_length, target_dim)
return self.samples.shape[2]
def as_json_dict(self, config: "Config") -> dict:
result = super().as_json_dict(config)
if OutputType.samples in config.output_types:
result["samples"] = self.samples.tolist()
return result
def __repr__(self):
return ", ".join(
[
f"SampleForecast({self.samples!r})",
f"{self.start_date!r}",
f"{self.freq!r}",
f"item_id={self.item_id!r}",
f"info={self.info!r})",
]
)
class QuantileForecast(Forecast):
"""
A Forecast that contains arrays (i.e. time series) for quantiles and mean
Parameters
----------
forecast_arrays
An array of forecasts
start_date
start of the forecast
freq
forecast frequency
forecast_keys
A list of quantiles of the form '0.1', '0.9', etc.,
and potentially 'mean'. Each entry corresponds to one array in
forecast_arrays.
info
additional information that the forecaster may provide e.g. estimated
parameters, number of iterations ran etc.
"""
def __init__(
self,
forecast_arrays: np.ndarray,
start_date: pd.Timestamp,
freq: str,
forecast_keys: List[str],
item_id: Optional[str] = None,
info: Optional[Dict] = None,
):
self.forecast_array = forecast_arrays
self.start_date = pd.Timestamp(start_date, freq=freq)
self.freq = freq
# normalize keys
self.forecast_keys = [
Quantile.from_str(key).name if key != "mean" else key
for key in forecast_keys
]
self.item_id = item_id
self.info = info
self._dim = None
shape = self.forecast_array.shape
assert shape[0] == len(self.forecast_keys), (
f"The forecast_array (shape={shape} should have the same "
f"length as the forecast_keys (len={len(self.forecast_keys)})."
)
self.prediction_length = shape[-1]
self._forecast_dict = {
k: self.forecast_array[i] for i, k in enumerate(self.forecast_keys)
}
self._nan_out = np.array([np.nan] * self.prediction_length)
def quantile(self, q: Union[float, str]) -> np.ndarray:
q_str = Quantile.parse(q).name
# We return nan here such that evaluation runs through
return self._forecast_dict.get(q_str, self._nan_out)
@property
def mean(self):
"""
Forecast mean.
"""
return self._forecast_dict.get("mean", self._nan_out)
def dim(self) -> int:
if self._dim is not None:
return self._dim
else:
if (
len(self.forecast_array.shape) == 2
): # 1D target. shape: (num_samples, prediction_length)
return 1
else:
return self.forecast_array.shape[
1
] # 2D target. shape: (num_samples, target_dim, prediction_length)
def __repr__(self):
return ", ".join(
[
f"QuantileForecast({self.forecast_array!r})",
f"start_date={self.start_date!r}",
f"freq={self.freq!r}",
f"forecast_keys={self.forecast_keys!r}",
f"item_id={self.item_id!r}",
f"info={self.info!r})",
]
)
# class DistributionForecast(Forecast):
# """
# A `Forecast` object that uses a distribution directly.
# This can for instance be used to represent marginal probability
# distributions for each time point -- although joint distributions are
# also possible, e.g. when using MultiVariateGaussian).
# Parameters
# ----------
# distribution
# Distribution object. This should represent the entire prediction
# length, i.e., if we draw `num_samples` samples from the distribution,
# the sample shape should be
# samples = trans_dist.sample(num_samples)
# samples.shape -> (num_samples, prediction_length)
# start_date
# start of the forecast
# freq
# forecast frequency
# info
# additional information that the forecaster may provide e.g. estimated
# parameters, number of iterations ran etc.
# """
# @validated()
# def __init__(
# self,
# distribution: Distribution,
# start_date,
# freq,
# item_id: Optional[str] = None,
# info: Optional[Dict] = None,
# ):
# self.distribution = distribution
# self.shape = (self.distribution.batch_shape +
# self.distribution.event_shape)
# self.prediction_length = self.shape[0]
# self.item_id = item_id
# self.info = info
# assert isinstance(
# start_date,
# pd.Timestamp), "start_date should be a pandas Timestamp object"
# self.start_date = start_date
# assert isinstance(freq, str), "freq should be a string"
# self.freq = freq
# self._mean = None
# @property
# def mean(self):
# """
# Forecast mean.
# """
# if self._mean is not None:
# return self._mean
# else:
# self._mean = self.distribution.mean.asnumpy()
# return self._mean
# @property
# def mean_ts(self):
# """
# Forecast mean, as a pandas.Series object.
# """
# return pd.Series(self.index, self.mean)
# def quantile(self, level):
# level = Quantile.parse(level).value
# q = self.distribution.quantile(mx.nd.array([level])).asnumpy()[0]
# return q
# def to_sample_forecast(self, num_samples: int = 200) -> SampleForecast:
# return SampleForecast(
# samples=self.distribution.sample(num_samples),
# start_date=self.start_date,
# freq=self.freq,
# item_id=self.item_id,
# info=self.info,
# )