[docs] Add xgboost_ray to docs (#12184)

Co-authored-by: Amog Kamsetty <amogkamsetty@yahoo.com>
This commit is contained in:
Richard Liaw
2020-11-27 11:36:56 -08:00
committed by GitHub
parent 0a505ca83d
commit 7c009d22cf
11 changed files with 333 additions and 1 deletions
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# --------------------------------------------------------------------
# Tests from the python/ray/util/sgd/tests directory.
# Please keep these sorted alphabetically.
# --------------------------------------------------------------------
py_test(
name = "simple_example",
size = "small",
srcs = ["simple_example.py"],
deps = [":xgb_lib"],
tags = ["exclusive"],
)
py_test(
name = "simple_tune",
size="small",
srcs = ["simple_tune.py"],
deps = [":xgb_lib"],
tags = ["exlcusive"]
)
# This is a dummy test dependency that causes the above tests to be
# re-run if any of these files changes.
py_library(
name = "xgb_lib",
srcs = glob(["**/*.py"], exclude=["tests/*.py"]),
)
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import logging
logger = logging.getLogger(__name__)
train = None
predict = None
RayDMatrix = None
try:
from xgboost_ray import train, predict, RayDMatrix, RayFileType
except ImportError:
logger.info(
"xgboost_ray is not installed. Please run "
"`pip install git+https://github.com/ray-project/xgboost_ray`.")
__all__ = ["train", "predict", "RayDMatrix", "RayFileType"]
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from sklearn import datasets
from sklearn.model_selection import train_test_split
from ray.util.xgboost import RayDMatrix, train
# __xgboost_begin__
def main():
# Load dataset
data, labels = datasets.load_breast_cancer(return_X_y=True)
# Split into train and test set
train_x, test_x, train_y, test_y = train_test_split(
data, labels, test_size=0.25)
train_set = RayDMatrix(train_x, train_y)
test_set = RayDMatrix(test_x, test_y)
# Set config
config = {
"tree_method": "approx",
"objective": "binary:logistic",
"eval_metric": ["logloss", "error"],
"max_depth": 3,
}
evals_result = {}
# Train the classifier
bst = train(
config,
train_set,
evals=[(test_set, "eval")],
evals_result=evals_result,
max_actor_restarts=1,
checkpoint_path="/tmp/checkpoint/",
verbose_eval=False)
bst.save_model("simple.xgb")
print("Final validation error: {:.4f}".format(
evals_result["eval"]["error"][-1]))
# __xgboost_end__
if __name__ == "__main__":
main()
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from sklearn import datasets
from sklearn.model_selection import train_test_split
from ray.util.xgboost import RayDMatrix, train
# __train_begin__
num_cpus_per_actor = 1
num_actors = 1
def train_model(config):
# Load dataset
data, labels = datasets.load_breast_cancer(return_X_y=True)
# Split into train and test set
train_x, test_x, train_y, test_y = train_test_split(
data, labels, test_size=0.25)
train_set = RayDMatrix(train_x, train_y)
test_set = RayDMatrix(test_x, test_y)
evals_result = {}
bst = train(
params=config,
dtrain=train_set,
evals=[(test_set, "eval")],
evals_result=evals_result,
verbose_eval=False,
num_actors=num_actors,
cpus_per_actor=num_cpus_per_actor)
bst.save_model("model.xgb")
# __train_end__
def main():
# __tune_begin__
from ray import tune
# Set config
config = {
"tree_method": "approx",
"objective": "binary:logistic",
"eval_metric": ["logloss", "error"],
"eta": tune.loguniform(1e-4, 1e-1),
"subsample": tune.uniform(0.5, 1.0),
"max_depth": tune.randint(1, 9)
}
# __tune_end__
# __tune_run_begin__
analysis = tune.run(
train_model,
config=config,
metric="eval-error",
mode="min",
num_samples=4,
resources_per_trial={
"cpu": 1,
"extra_cpu": num_actors * num_cpus_per_actor
})
# Load the best model checkpoint
import xgboost as xgb
import os
# Load in the best performing model.
best_bst = xgb.Booster()
best_bst.load_model(os.path.join(analysis.best_logdir, "model.xgb"))
accuracy = 1. - analysis.best_result["eval-error"]
print(f"Best model parameters: {analysis.best_config}")
print(f"Best model total accuracy: {accuracy:.4f}")
# __tune_run_end__
if __name__ == "__main__":
main()
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@@ -31,6 +31,7 @@ torchvision>=0.6.0
# transformers
git+git://github.com/huggingface/transformers.git@bdcc4b78a27775d1ec8f3fd297cb679c257289db#transformers
git+git://github.com/ray-project/tune-sklearn@master#tune-sklearn
git+git://github.com/ray-project/xgboost_ray@master#xgboost_ray
wandb
xgboost
zoopt>=0.4.1