[tune] Dragonfly Optimizer (#5955)

* Add sample example

* Copy relevant lines of ask from inherited Optimizer

* Ignore strategy

* Additional changes

* Add DragonflySearch for tune connector for Dragonfly

* Add example and fix small errors

* lint

* Remove skopt references

* Update example based off of Dragonfly changes

* Edit example for final Dragonfly edits

* Formatting and documentation edits

* Add documentation and add to test pipeline

* Address PR comments

* Fix Jenkins test

* Adjust Dragonfly to PR#7366

* Lint

* fix_tests

Co-authored-by: Richard Liaw <rliaw@berkeley.edu>
This commit is contained in:
Anthony Yu
2020-03-10 08:40:36 -07:00
committed by GitHub
co-authored by Richard Liaw
parent fa785a2ad2
commit 89ec4adb72
7 changed files with 274 additions and 12 deletions
@@ -0,0 +1,83 @@
"""This test checks that Dragonfly is functional.
It also checks that it is usable with a separate scheduler.
"""
from __future__ import absolute_import
from __future__ import division
from __future__ import print_function
import ray
from ray.tune import run
from ray.tune.schedulers import AsyncHyperBandScheduler
from ray.tune.suggest.dragonfly import DragonflySearch
def objective(config, reporter):
import numpy as np
import time
time.sleep(0.2)
for i in range(config["iterations"]):
vol1 = config["point"][0] # LiNO3
vol2 = config["point"][1] # Li2SO4
vol3 = config["point"][2] # NaClO4
vol4 = 10 - (vol1 + vol2 + vol3) # Water
# Synthetic functions
conductivity = vol1 + 0.1 * (vol2 + vol3)**2 + 2.3 * vol4 * (vol1**1.5)
# Add Gaussian noise to simulate experimental noise
conductivity += np.random.normal() * 0.01
reporter(timesteps_total=i, objective=conductivity)
time.sleep(0.02)
if __name__ == "__main__":
import argparse
from dragonfly.opt.gp_bandit import EuclideanGPBandit
from dragonfly.exd.experiment_caller import EuclideanFunctionCaller
from dragonfly import load_config
parser = argparse.ArgumentParser()
parser.add_argument(
"--smoke-test", action="store_true", help="Finish quickly for testing")
args, _ = parser.parse_known_args()
ray.init()
config = {
"num_samples": 10 if args.smoke_test else 50,
"config": {
"iterations": 100,
},
"stop": {
"timesteps_total": 100
},
}
domain_vars = [{
"name": "LiNO3_vol",
"type": "float",
"min": 0,
"max": 7
}, {
"name": "Li2SO4_vol",
"type": "float",
"min": 0,
"max": 7
}, {
"name": "NaClO4_vol",
"type": "float",
"min": 0,
"max": 7
}]
domain_config = load_config({"domain": domain_vars})
func_caller = EuclideanFunctionCaller(
None, domain_config.domain.list_of_domains[0])
optimizer = EuclideanGPBandit(func_caller, ask_tell_mode=True)
algo = DragonflySearch(
optimizer, max_concurrent=4, metric="objective", mode="max")
scheduler = AsyncHyperBandScheduler(metric="objective", mode="max")
run(objective,
name="dragonfly_search",
search_alg=algo,
scheduler=scheduler,
**config)