Added sections to gallery of examples

Modified travis_script.sh to account for the new structure of the gallery

Added README.txt files in directories of gallery examples

Fixed references to gallery images in user guide pages

Fixed broken links
This commit is contained in:
emmanuelle
2015-12-19 15:28:15 +01:00
parent 827e4b11c9
commit 55f5103dd8
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"""
====================
Local Otsu Threshold
====================
This example shows how Otsu's threshold [1]_ method can be applied locally. For
each pixel, an "optimal" threshold is determined by maximizing the variance
between two classes of pixels of the local neighborhood defined by a
structuring element.
The example compares the local threshold with the global threshold.
.. note: local is much slower than global thresholding
.. [1] http://en.wikipedia.org/wiki/Otsu's_method
"""
import matplotlib
import matplotlib.pyplot as plt
from skimage import data
from skimage.morphology import disk
from skimage.filters import threshold_otsu, rank
from skimage.util import img_as_ubyte
matplotlib.rcParams['font.size'] = 9
img = img_as_ubyte(data.page())
radius = 15
selem = disk(radius)
local_otsu = rank.otsu(img, selem)
threshold_global_otsu = threshold_otsu(img)
global_otsu = img >= threshold_global_otsu
fig, ax = plt.subplots(2, 2, figsize=(8, 5), sharex=True, sharey=True, subplot_kw={'adjustable':'box-forced'})
ax1, ax2, ax3, ax4 = ax.ravel()
fig.colorbar(ax1.imshow(img, cmap=plt.cm.gray),
ax=ax1, orientation='horizontal')
ax1.set_title('Original')
ax1.axis('off')
fig.colorbar(ax2.imshow(local_otsu, cmap=plt.cm.gray),
ax=ax2, orientation='horizontal')
ax2.set_title('Local Otsu (radius=%d)' % radius)
ax2.axis('off')
ax3.imshow(img >= local_otsu, cmap=plt.cm.gray)
ax3.set_title('Original >= Local Otsu' % threshold_global_otsu)
ax3.axis('off')
ax4.imshow(global_otsu, cmap=plt.cm.gray)
ax4.set_title('Global Otsu (threshold = %d)' % threshold_global_otsu)
ax4.axis('off')
plt.show()