diff --git a/Makefile b/Makefile index 03712fcf..b80eba0d 100644 --- a/Makefile +++ b/Makefile @@ -16,5 +16,5 @@ coverage: nosetests skimage --with-coverage --cover-package=skimage html: - pip install sphinx - make -C doc html + pip install -q sphinx + export SPHINXOPTS=-W; make -C doc html diff --git a/skimage/filters/rank/generic.py b/skimage/filters/rank/generic.py index 467c54ed..31e80b76 100644 --- a/skimage/filters/rank/generic.py +++ b/skimage/filters/rank/generic.py @@ -1,5 +1,5 @@ """The local histogram is computed using a sliding window similar to the method -described in [1]_. +described in [1]. Input image can be 8-bit or 16-bit, for 16-bit input images, the number of histogram bins is determined from the maximum value present in the image. @@ -749,7 +749,7 @@ def tophat(image, selem, out=None, mask=None, shift_x=False, shift_y=False): def noise_filter(image, selem, out=None, mask=None, shift_x=False, shift_y=False): - """Noise feature as described in [1]_. + """Noise feature as described in [1]. Parameters ---------- @@ -800,7 +800,7 @@ def noise_filter(image, selem, out=None, mask=None, shift_x=False, def entropy(image, selem, out=None, mask=None, shift_x=False, shift_y=False): - """Local entropy [1]_. + """Local entropy [1]. The entropy is computed using base 2 logarithm i.e. the filter returns the minimum number of bits needed to encode the local greylevel distribution. diff --git a/skimage/io/_plugins/pil_plugin.ini b/skimage/io/_plugins/pil_plugin.ini index e6382e5e..14034410 100644 --- a/skimage/io/_plugins/pil_plugin.ini +++ b/skimage/io/_plugins/pil_plugin.ini @@ -1,3 +1,3 @@ [pil] description = Image reading via the Python Imaging Library -provides = imread, imsave, imshow, _app_show +provides = imread, imsave diff --git a/skimage/restoration/deconvolution.py b/skimage/restoration/deconvolution.py index d4c51d95..632d6788 100644 --- a/skimage/restoration/deconvolution.py +++ b/skimage/restoration/deconvolution.py @@ -363,7 +363,7 @@ def richardson_lucy(image, psf, iterations=50, clip=True): References ---------- - .. [2] http://en.wikipedia.org/wiki/Richardson%E2%80%93Lucy_deconvolution + .. [1] http://en.wikipedia.org/wiki/Richardson%E2%80%93Lucy_deconvolution """ image = image.astype(np.float) psf = psf.astype(np.float) diff --git a/skimage/transform/_geometric.py b/skimage/transform/_geometric.py index 3a2972c0..c94e3b76 100644 --- a/skimage/transform/_geometric.py +++ b/skimage/transform/_geometric.py @@ -332,7 +332,9 @@ class ProjectiveTransform(GeometricTransform): class AffineTransform(ProjectiveTransform): - """2D affine transformation of the form:: + """2D affine transformation of the form: + + ..:math: X = a0*x + a1*y + a2 = = sx*x*cos(rotation) - sy*y*sin(rotation + shear) + a2 @@ -551,7 +553,9 @@ class PiecewiseAffineTransform(GeometricTransform): class SimilarityTransform(ProjectiveTransform): - """2D similarity transformation of the form:: + """2D similarity transformation of the form: + + ..:math: X = a0 * x - b0 * y + a1 = = m * x * cos(rotation) - m * y * sin(rotation) + a1 @@ -715,7 +719,9 @@ class SimilarityTransform(ProjectiveTransform): class PolynomialTransform(GeometricTransform): - """2D transformation of the form:: + """2D transformation of the form: + + ..:math: X = sum[j=0:order]( sum[i=0:j]( a_ji * x**(j - i) * y**i )) Y = sum[j=0:order]( sum[i=0:j]( b_ji * x**(j - i) * y**i ))