From d844e437792726f85c123c929695e84055e91491 Mon Sep 17 00:00:00 2001 From: Steven Silvester Date: Sat, 4 Oct 2014 22:09:49 -0500 Subject: [PATCH] Update depends and add simpleitk and imread --- DEPENDS.txt | 16 +++++++++++----- 1 file changed, 11 insertions(+), 5 deletions(-) diff --git a/DEPENDS.txt b/DEPENDS.txt index 25bdf700..79bda5ed 100644 --- a/DEPENDS.txt +++ b/DEPENDS.txt @@ -12,7 +12,8 @@ You can use pip to automatically install the base dependencies as follows:: Runtime requirements -------------------- * `SciPy >= 0.9 `__ -* `Matplotlib >= 1.0 `__ +* `Matplotlib >= 1.0 `__ +* `NetworkX >= 1.8 ` Known build errors ------------------ @@ -29,9 +30,6 @@ Optional Requirements You can use this scikit with the basic requirements listed above, but some functionality is only available with the following installed: -* `NetworkX >= 1.8 `__ is needed to use region -adjacency graph (RAG)-based segmentation functions. - * `PyQt4 `__ The ``qt`` plugin that provides ``imshow(x, fancy=True)`` and `skivi`. @@ -47,7 +45,15 @@ adjacency graph (RAG)-based segmentation functions. (or `PIL `__) The ``Pillow`` library (or equivalently ``PIL``) is used for Input/Output. -* `Astropy `__ is required to use the FITS io plug-in. +* `Astropy `__ provides FITS io capability. + +*`SimpleITK ` + Optional io plugin providing a wide variety of `formats `__. + including specialized formats using in Medical imagery. + +*`imread ` + Optional io plugin providing most standard `formats `__. + Testing requirements --------------------