b3f6b545cb
Added example for region boundary merging
2016-04-27 01:03:09 -04:00
2a87c07800
midway thru changes
2016-04-26 14:23:32 -04:00
a406e270b1
Improved drawing in plot_rag_draw.py example ( #1872 )
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Improved drawing in draw_rag example; changed draw_rag to show_rag, made it return ScalarMappable to draw colorbars; added magma colormap
2016-04-24 09:28:24 +03:00
b710bd21d2
Use a stacklevel of 2 by default for all warnings
2016-01-30 08:57:46 -06:00
b9199fe765
DOC : Add comment for the use of strided output array for generic_filter in RAG
2016-01-25 12:50:45 +05:30
22bf68d9b4
removed failing doctest line
2016-01-08 21:49:01 -05:00
753c8caf4e
correct variable name mistake
2016-01-08 14:11:56 -05:00
802214d5ac
Hold pixel count in mean boundary RAG edges
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This value is needed to combine edges when merging nodes.
2016-01-08 22:11:31 +11:00
30145ab7f4
Use function to update graph edges from CSR
2016-01-08 22:10:20 +11:00
f9dfa1d81d
Make mean boundary RAG testing more robust
2016-01-08 17:25:10 +11:00
ea18fcb99b
use as strided
2016-01-06 16:23:43 -05:00
a5f6db59cb
doc example
2016-01-06 15:42:10 -05:00
422dfc6c22
cleanup
2016-01-06 15:17:48 -05:00
e8f2805d64
changed to eosion/dilation logic
2016-01-06 15:07:35 -05:00
a95c0bdddc
passing selem argument
2016-01-06 15:07:35 -05:00
4c05e65670
changed logic to use erosion/dilation
2016-01-06 15:07:35 -05:00
caba3041d1
indentation correction
2016-01-06 15:06:18 -05:00
1769cdddcf
added boundary rag construction
2016-01-06 15:06:18 -05:00
06186710d5
Update outdated docstring of _add_edge_filter
2015-12-16 08:31:30 +11:00
5c03f2aff5
Bug: not all edges found by asymmetric footprint
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If we have a label image:
[[1, 2],
[3, 4]]
Then the footprint:
[[0, 0, 0],
[0, 1, 1],
[0, 1, 1]]
will not discover the edge (2, 3), even though that edge should be
present when `connectivity=2`.
This commit fixes the bug by using a complete footprint, without the
top/left surfaces zeroed out.
See also:
https://github.com/scikit-image/scikit-image/pull/1826#issuecomment-164597442
2015-12-15 10:56:04 +11:00
4deeb1f802
Move max_id logic to top of RAG constructor
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max_id is used during RAG building iteration, resulting in an error if
it is not defined ahead of the generic_filter stage.
2015-12-14 19:06:43 +11:00
53d3154f09
Use a strided 1-element array as dummy filter out
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When using generic_filter to build a graph, the numerical filter
output is actually ignored. Building a full array, even of the
smallest dtype, was wasteful. Using stride_tricks solves this by
creating a single-element buffer into which all output is fed.
2015-12-14 18:57:29 +11:00
49aa7cf999
Fix typo in variable name
2015-12-14 18:42:25 +11:00
d5819f664a
Add tests for generic RAG construction
2015-12-14 17:12:11 +11:00
e9c4c87519
Make RAG generic, requiring only label_image
2015-12-14 17:12:11 +11:00
c3d52d602c
Simplify reference to generate_binary_structure
2015-12-14 17:12:11 +11:00
97f3ad1a6b
NetworkX is required so remove optional import
2015-12-14 17:12:11 +11:00
0d134987f9
Harmonize all ndimage usage across the library
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Only two forms remain in use:
- `from scipy import ndimage as ndi`
- `from scipy.ndimage import function`
2015-06-09 15:18:37 +10:00
cacd214d68
Corrected Typo
2015-06-06 21:36:00 +05:30
8a78ad87ed
skip loop when min and max are equal
2015-06-06 00:51:30 +05:30
18b1906607
removed debug statements
2015-06-03 22:03:34 +05:30
23c6111ad3
Fixing error in ncut when subgraph as all equal weights ( #1538 )
2015-06-03 21:58:26 +05:30
09876408fc
Fix some sphinx warnings and add to build
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Fix some sphinx warnings
Add documentation build to test
Add documentation build to test
Remove change in numpydoc
Remove change in apigen
Add makefile target for html and add to travis script
Add a makefile target for html and add to travis script
Fix more sphinx warnings
2015-02-07 16:40:26 -06:00
0d1a2ef1fa
Import graph into future parent package
2015-02-04 00:37:48 +11:00
e5fe82d6f3
Fix even more tests still importing skimage.graph
2015-02-03 16:20:15 +11:00
9cbeeca0df
Update RAG doctest to use future
2015-02-03 15:52:26 +11:00
008775853f
Fix setup.py cascade
2015-02-03 15:34:56 +11:00
d2d50e9391
Add package docstring for skimage.future
2015-02-03 15:20:57 +11:00
1b748668ee
Move package to skimage.future.graph
2015-02-03 15:06:27 +11:00
605f05942f
Move RAG files to skimage.future
2015-02-03 14:58:57 +11:00
Vighnesh Birodkar