7a2c80e70f
Fix spacing for inline comments
2016-02-25 17:24:29 -08:00
f6618ef8b2
Clean up profile-line docstring
2016-02-24 17:38:21 -08:00
7f5b9327fa
Update docstring for profile_line
2016-02-24 16:54:22 -08:00
a5a771a8e4
Modified label function so that background pixels are labeled with 0, and
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background=0 by default.
Modified label function so that background pixels are labeled with 0, and
background=0 by default. All tests of _ccomp.pyx pass
Modified a couple of files to be consistent with the new behavior of
measure.label
Modified doctring of label to pass doctest
Modified TODO.txt as well as release notes to mention the new behavior of
label.
Typo in docstring
Typo in docstring
Changed default value of kw argument background in measure.label
Removed unnecessary and outdated comment
2016-02-22 21:19:23 +01:00
44150989ee
WIP
2016-02-21 16:50:21 +01:00
116ef0d649
Remove unit tests for deprecated features
2016-02-09 12:25:55 +01:00
9d9a4b3e0b
Fix some remaining TODO items
2016-02-09 11:11:28 +01:00
e6338b75bd
Merge pull request #1921 from JDWarner/image_comparison_prefix
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STY: Image comparison functions now share common prefix
2016-02-02 17:07:17 +01:00
ab7f0774aa
FIX: Pass arguments from deprecated function, update examples.
2016-02-01 13:57:56 -07:00
b218cfdd81
STY: Image comparison functions now share common prefix
2016-01-31 23:11:38 -07:00
a3313abd20
Merge pull request #1916 from blink1073/warn-stacklevel
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Use a stacklevel of 2 by default for all warnings
2016-01-31 11:25:39 +01:00
4b2692b7c0
Cleanup
2016-01-30 15:56:19 -06:00
6170a7e532
Include the pyx files
2016-01-30 08:59:31 -06:00
b710bd21d2
Use a stacklevel of 2 by default for all warnings
2016-01-30 08:57:46 -06:00
b8e7740159
use dtype=np.float64 in calls to np.mean
2016-01-28 22:10:02 -05:00
8483a62e76
make suggested naming changes in simple_metrics.py
2016-01-28 22:09:52 -05:00
0f71278a10
revert simple_metrics to np.float64 computations for all input types
2016-01-27 12:36:22 -05:00
64f62032c3
psnr: update dynamic range calculation
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also moved the identical dtype and shape checks into a separate utility function
2016-01-27 11:56:12 -05:00
ea3ad97b3e
TST: add MSE, NRMSE test that would fail in case of int overflow
2016-01-27 11:24:56 -05:00
acef026676
fixed outdated import name _simple_metrics in __init__.py
2016-01-26 18:21:12 -05:00
a8124166c1
Fix the default dynamic_range in PSNR and warn if inputs don't meet the assumptions made
2016-01-26 18:17:56 -05:00
f4773e303d
NRMSE, MSE, PSNR: make sure all inputs are float prior to the calculations.
2016-01-26 18:17:02 -05:00
a681ccd3ee
TST: add test for invalid normalization type in NRMSE
2016-01-26 17:56:38 -05:00
72607ca99e
update NRMSE docstrings and include run_module_suite in the corresponding test file
2016-01-24 12:41:18 -05:00
cfb9c760db
TST: fix broken test
2016-01-23 21:35:36 -05:00
69e73ea52b
TST: add tests for nrmse, psnr
2016-01-23 21:09:22 -05:00
ef3896d013
add new metrics to API
2016-01-23 21:09:22 -05:00
ee38b920d9
ENH: Add some simple image comparison metrics: PSNR and NRMSE
2016-01-23 21:09:21 -05:00
6c9325aadf
Minor fixes: errant indent, functools.wraps and python3 style
2015-12-28 21:13:22 +01:00
fab4265f47
Removed @property decorator, that made _install_properties_doc crash
2015-12-25 12:37:41 +01:00
add3352284
Euler number is only2d
2015-12-25 11:38:23 +01:00
9317b7be34
Make area a cached property; use np.sum
2015-12-24 19:02:15 +01:00
d8cc148d8c
Replace individual errors by 2D decorator
2015-12-24 19:00:43 +01:00
0359284623
Modified some methods in _RegionProperties class to make them
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dimension-agnostic. Removed the NotImplementedError for 3-D images in
regionprops function.
2015-12-24 18:56:49 +01:00
e1751f91e2
Some PEP8 in test module
2015-12-24 18:52:57 +01:00
4509338aac
Merge pull request #1777 from stevendbrown/rp_intensity_check
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Added label vs. intensity shape checking to regionprops
2015-12-23 22:34:59 +01:00
d62524f103
Mentioned Euler characteristic (instead of Euler number) in docstring of
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regionprops.
2015-12-23 16:26:23 +01:00
a56c6071c2
Corrected bug in the computation of the Euler characteristic.
2015-12-23 16:09:13 +01:00
4aa08fe353
Simplify cache
2015-12-14 00:42:29 -08:00
bf5ba4540b
Fix doc setting for Python 2.x
2015-12-14 00:42:29 -08:00
024dd34b19
Clean up style and PEP8
2015-12-14 00:42:29 -08:00
5e848f5889
Auto-generate _RegionProps property docstrings
2015-12-14 00:42:29 -08:00
966e0fd685
Merge pull request #1770 from stefanv/list_regionprops
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Only iterate over available region properties
2015-12-09 11:21:56 +11:00
443f4cc0eb
DOC: Correct docstring to correctly reflect defaults
2015-12-07 21:12:17 -07:00
29725068ce
Guarantee correct mesh orientation from marching cubes
2015-12-06 00:28:18 -06:00
6f016c9087
Merge pull request #1771 from noahtreb/fix-correct_mesh_orientation
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FIX: Fix `correct_mesh_orientation` for spacing != (1,1,1)
2015-12-05 12:22:18 -06:00
50f2a0b4ed
Create helper function to compute norm along axis
2015-12-04 23:11:19 -05:00
f88694e5a3
Fix LineModelND test cases
2015-12-04 23:05:59 -05:00
0bdf4251c6
documentation updates; added "3D" to example title
2015-12-04 22:25:13 +00:00
6f9a55c987
added deprecation warning for LineModel and added note in TODO.txt
2015-12-04 08:48:08 +00:00
Shaun Singh