Gregory R. Lee
ce8e88d6e2
remove truncate argument from gaussian_filter for scipy<0.14 compatibility
2015-05-19 11:16:19 -04:00
Gregory R. Lee
c7916ffe9a
remove image_similarity; set 11-tap Gaussian via truncate=3.5; add links to references
2015-05-15 21:35:47 -04:00
Gregory R. Lee
6317aac01e
use scipy.ndimage.gaussian_filter instead of a custom implementation
2015-05-15 16:03:00 -04:00
Gregory R. Lee
9090aa6afb
remove multichannel magic and default to False. fix bugs in tests introduced during rebase
2015-05-15 14:28:48 -04:00
Gregory R. Lee
d781fc5774
docstring fixes
2015-05-15 14:09:03 -04:00
Gregory R. Lee
9cb4b4bae6
revise argument handling code for multichannel case
2015-05-15 13:47:20 -04:00
Gregory R. Lee
86e07447d1
replace _discard_edges with skimage.util.arraypad.crop
2015-05-15 13:47:16 -04:00
Gregory R. Lee
3bf6cc106e
add additional tests
2015-05-15 13:47:13 -04:00
Gregory R. Lee
6294dcbf12
allow remaining hardcoded constants (sigma, K1, K2) to be modified via kwargs
2015-05-15 13:45:40 -04:00
Gregory R. Lee
6ba1596174
sample vs. population covariance difference addressed to more accurately match reference implementations
2015-05-15 13:45:38 -04:00
Gregory R. Lee
3b27107bfb
structural_similarity: add image_content_weighting option
2015-05-15 13:42:29 -04:00
Gregory R. Lee
b193e7990e
structural_similarity: add option to return full ssim image in addition to the mean
2015-05-15 13:42:27 -04:00
Gregory R. Lee
44f1fd37f2
add multichannel support to structural_similarity
2015-05-15 13:42:14 -04:00
Gregory R. Lee
49a1060719
update structural similarity to nD implementation with gaussian weighting to match other reference implementations
2015-05-15 13:42:06 -04:00
Stefan van der Walt
4b0456b8ef
Merge pull request #1488 from danielwe/blob-float-sigma
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Avoid truncating sigma to integer in blob detection (fixes tests for #1257 )
2015-05-14 23:42:01 -07:00
Joel Frederico
575689baf2
Update measure.regionprops.weighted_moments_central doc
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The documentation is misleading. In fact, the code does do what a user would expect: use the weighted centroid coordinates, not the centroid coordinates. It's one word, but it's an important one!
https://github.com/scikit-image/scikit-image/blob/master/skimage/measure/_regionprops.py#L291
2015-05-14 17:15:00 -07:00
Juan Nunez-Iglesias
a74ba0ec54
Merge pull request #1502 from blink1073/test-mulitpage-rgb-tiff
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Add Test for Multipage RGB TIFF
2015-05-13 13:46:06 +10:00
Steven Silvester
dfaab1957e
Add a multipage tiff test and cleanup test_tifffile
2015-05-12 21:10:23 -05:00
Stefan van der Walt
2b10dda6b8
Merge pull request #1485 from emmanuelle/model_binary
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Add rounded blobs generation
2015-05-12 12:21:47 -07:00
arve0
0eb7d132d3
pop_bilateral docstring: the->pixels
2015-05-12 15:30:14 +02:00
Steven Silvester
e240dff395
Reinstate explicit plugin
2015-05-11 20:54:46 -05:00
emmanuelle
1ef90468e0
Modified (again) test accuracy.
2015-05-11 22:58:16 +02:00
Steven Silvester
0491326d22
Remove explicit call to use_plugin
2015-05-10 20:49:46 -05:00
emmanuelle
e751d245f3
Modified test with a less stringent condition on numerical value for the
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mean value of blobs image.
2015-05-10 23:29:54 +02:00
Johannes Schönberger
0c69cdc5e7
Fix out-of-bounds access in color LUT for NaN values
2015-05-10 13:47:42 -04:00
Steven Silvester
b479eabd7e
Fix failing pil test
2015-05-09 16:56:10 -05:00
Stefan van der Walt
6fc4e11b9a
Add in-place operation
2015-05-09 10:46:32 -07:00
Steven Silvester
5f067ff43b
Move tests to pil plugin and fix file path
2015-05-09 10:22:48 -05:00
Steven Silvester
d351c13c2d
Add tests for multipage_rgb tif
2015-05-09 09:32:56 -05:00
Steven Silvester
ef9c4d8d19
Fix handling of img_num=0 cases
2015-05-09 09:32:33 -05:00
Steven Silvester
883baa0328
Add a multi-page rbg tiff file
2015-05-09 09:10:34 -05:00
Steven Silvester
556cb3452c
Merge pull request #1498 from cgohlke/patch-2
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Fix skimage.io.imread returns incorrect dimensions
2015-05-09 09:02:41 -05:00
emmanuelle
073c9735dc
Fixed example in doctest.
2015-05-09 14:51:41 +02:00
emmanuelle
1c3af75dd3
Addressed a few minor issues raised by Juan and Stefan.
2015-05-09 10:23:49 +02:00
Stefan van der Walt
3b0179e4c1
Improve test robustness
2015-05-08 22:26:03 -07:00
Stefan van der Walt
ef8f8c70d6
Merge pull request #1494 from arve0/reset_button_crop_plugin
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Add reset button to crop plugin
2015-05-08 01:35:00 -07:00
Christoph Gohlke
549def734e
Fix failing test
2015-05-07 17:35:48 -07:00
Christoph Gohlke
3d3351b9fa
Fix failing test
2015-05-07 17:34:05 -07:00
Christoph Gohlke
47cfcb4b8b
TST skimage.io.imread returns incorrect dimensions
2015-05-07 15:07:59 -07:00
Christoph Gohlke
3c8bf02fa5
Fix skimage.io.imread returns incorrect dimensions
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Fixes #1496
2015-05-07 15:03:25 -07:00
arve0
d7a80f55f3
add reset button to crop plugin
2015-05-07 10:14:38 +02:00
Stefan van der Walt
7741317cbb
Merge pull request #1475 from gustavla/slic-fix
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Fix crashing bug in slic
2015-05-06 00:22:48 -07:00
Steven Silvester
add8419f13
Merge pull request #1492 from arve0/viewer_button
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viewer: add button widget
2015-05-04 19:58:08 -05:00
arve0
690a839de8
add button class
2015-05-04 12:12:18 +02:00
Daniel Wennberg
d5099db362
Fix PEP8
2015-05-03 01:32:56 +02:00
Daniel Wennberg
b80e494484
Change data types to conform to style guide
2015-05-02 18:12:30 +02:00
Daniel Wennberg
dc0a91b569
Fix doctests for #1257
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Changing the return type of the blob functions from integer to float
arrays invalidated the docstring examples. Updating the examples fixes
the doctests.
2015-05-02 18:12:30 +02:00
Daniel Wennberg
c86c6effe8
Fix tests for #1257
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The test of blob_doh() set an unrealistically strict threshold for the
accuracy of the estimated blob radius, causing the test to fail with the
true floating-point value (previously, the test passed only because
sigma was truncated to integer). Increasing the threshold fixes the
problem.
2015-05-02 18:12:30 +02:00
Eric and Daniel Wennberg
833edc17ef
Fixed typo
2015-05-02 18:12:30 +02:00
Eric and Daniel Wennberg
eb6ddc735b
Changed local_maxima to float32
2015-05-02 18:12:30 +02:00
Gregory R. Lee