cc8c3b7687
Merge pull request #1847 from emmanuelle/remove_label_from_morphology
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Remove deprecated label function from morphology module in preparation for 0.12 release
2015-12-23 15:01:46 -08:00
436d0e8ca3
TST: Test error handling in convex_hull, convex_hull_object.
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Also, a few PEP8 fixes in both module and tests.
2015-12-23 14:57:44 -08:00
227211fec7
DOC: Small one. The input to this one needs to be 2D.
2015-12-23 14:24:52 -08:00
0b61b8f46f
Removed deprecated label function from morphology module in preparation
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for 0.12 release.
2015-12-23 23:24:22 +01:00
4a07a3c9ad
Merge pull request #1810 from alexandrejaguar/master
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Solving white space + improving code +PEP8
2015-12-23 23:14:32 +01:00
4509338aac
Merge pull request #1777 from stevendbrown/rp_intensity_check
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Added label vs. intensity shape checking to regionprops
2015-12-23 22:34:59 +01:00
c5f9fffaad
Merge pull request #1844 from emmanuelle/fix_euler
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Fix euler
2015-12-23 21:56:46 +01:00
af95784ac9
Solving white space + improving code +PEP8
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Solving white space + Correcting code
Solving white spaces
Solving white spaces
Solving white spaces
Answering comments
Correcting silly mistakes
Solving white spaces
Trying again... now with Travis enabled
2015-12-23 18:20:57 -02:00
fb9fdec7db
Merge pull request #1845 from grlee77/tv_weight_fix
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Use appropriate weights in tv_denoise_chambolle
2015-12-23 19:53:51 +01:00
3f5aa73eb4
Update tests to also use reasonable weights for TV denoising
2015-12-23 12:30:12 -05:00
f143f4b39e
Change default weight for denoise_tv_chambolle to a value that is reasonable for float images scaled to the [0, 1] range
2015-12-23 12:29:37 -05:00
d62524f103
Mentioned Euler characteristic (instead of Euler number) in docstring of
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regionprops.
2015-12-23 16:26:23 +01:00
a56c6071c2
Corrected bug in the computation of the Euler characteristic.
2015-12-23 16:09:13 +01:00
d6105a0fe4
Merge pull request #1782 from pratapvardhan/clncython
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BUG: Buffer dtype mismatch, expected 'Py_ssize_t' but got 'long'
2015-12-23 15:35:05 +01:00
e102011098
Specify 2D images in denoise bilateral docstring
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Addresses #1840
2015-12-23 23:57:22 +11:00
f46a7e05ae
Merge pull request #1841 from blink1073/fix-matplotlib-2.6
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Lower required matplotlib version on 2.6 Travis test
2015-12-23 23:54:06 +11:00
39e1bb9376
Lower required matplotlib version on 2.6 test
2015-12-23 05:54:21 -06:00
ea9ed9ccd9
Merge pull request #1826 from jni/rag-generic
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Allow construction of simple RAGs from label images
2015-12-22 17:37:02 +01:00
a4d0ac85cc
Merge pull request #1603 from michaelpacer/draw_coords
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Fixed variable names to accord with r, c naming convention
2015-12-21 12:11:16 -06:00
d003f701a6
Merge pull request #1834 from emmanuelle/active_contour_example
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Move active contour example to edges section of the gallery
2015-12-20 07:59:19 -06:00
8758e2f9bb
Moved active contours example in edges section
2015-12-20 10:09:59 +01:00
b68decad9e
Thickened contours so that they are more visible in gallery thumbnail.
2015-12-20 10:08:31 +01:00
f0eec46e5c
Merge pull request #1783 from ivoflipse/fix_hog
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Fixing Cythonized version of HOG
2015-12-19 17:37:24 +01:00
9e3b87c092
Merge pull request #1823 from emmanuelle/structure-gallery
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Added sections to gallery of examples
2015-12-19 10:13:17 -06:00
55f5103dd8
Added sections to gallery of examples
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Modified travis_script.sh to account for the new structure of the gallery
Added README.txt files in directories of gallery examples
Fixed references to gallery images in user guide pages
Fixed broken links
2015-12-19 15:28:15 +01:00
14095de291
Merge pull request #1830 from scottsievert/fftconvolve
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Clean up richardson-lucy deconvolution function
2015-12-16 14:42:24 +11:00
8f0c5ab4d6
Merge pull request #1790 from WarrenWeckesser/imread-indexed-png-alpha
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FIX: imread w/PIL plugin no longer drops indexed PNG alpha channel
2015-12-15 19:57:23 -07:00
fb99e3cce6
styles code (no more functions, less lines)
2015-12-15 19:19:14 -06:00
06186710d5
Update outdated docstring of _add_edge_filter
2015-12-16 08:31:30 +11:00
3251d3c07a
BLD: Increase the minimum pillow version to 2.1.0.
2015-12-15 12:30:43 -05:00
6b908c1bb1
BUG: io: imread in the PIL plugin drops indexed PNG alpha channel.
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When using the PIL plugin to read an indexed PNG file that has
an alpha channel, the alpha channel would be lost.
2015-12-15 12:30:43 -05:00
2f3bc7f08d
Merge pull request #1828 from stefanv/radon_circle_warn
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radon transform: ignore values outside circle
2015-12-15 12:57:55 +11:00
74a015d1d4
radon transform: when circle=True, ignore values outside circle without throwing an error ( closes #1808 )
2015-12-14 17:13:29 -08:00
5c03f2aff5
Bug: not all edges found by asymmetric footprint
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If we have a label image:
[[1, 2],
[3, 4]]
Then the footprint:
[[0, 0, 0],
[0, 1, 1],
[0, 1, 1]]
will not discover the edge (2, 3), even though that edge should be
present when `connectivity=2`.
This commit fixes the bug by using a complete footprint, without the
top/left surfaces zeroed out.
See also:
https://github.com/scikit-image/scikit-image/pull/1826#issuecomment-164597442
2015-12-15 10:56:04 +11:00
86052d67bd
Merge pull request #1815 from stefanv/regionprops_cached_decorator
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Regionprops cached decorator
2015-12-14 15:12:39 -05:00
4aa08fe353
Simplify cache
2015-12-14 00:42:29 -08:00
bf5ba4540b
Fix doc setting for Python 2.x
2015-12-14 00:42:29 -08:00
024dd34b19
Clean up style and PEP8
2015-12-14 00:42:29 -08:00
5e848f5889
Auto-generate _RegionProps property docstrings
2015-12-14 00:42:29 -08:00
4deeb1f802
Move max_id logic to top of RAG constructor
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max_id is used during RAG building iteration, resulting in an error if
it is not defined ahead of the generic_filter stage.
2015-12-14 19:06:43 +11:00
53d3154f09
Use a strided 1-element array as dummy filter out
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When using generic_filter to build a graph, the numerical filter
output is actually ignored. Building a full array, even of the
smallest dtype, was wasteful. Using stride_tricks solves this by
creating a single-element buffer into which all output is fed.
2015-12-14 18:57:29 +11:00
49aa7cf999
Fix typo in variable name
2015-12-14 18:42:25 +11:00
d5819f664a
Add tests for generic RAG construction
2015-12-14 17:12:11 +11:00
e9c4c87519
Make RAG generic, requiring only label_image
2015-12-14 17:12:11 +11:00
c3d52d602c
Simplify reference to generate_binary_structure
2015-12-14 17:12:11 +11:00
97f3ad1a6b
NetworkX is required so remove optional import
2015-12-14 17:12:11 +11:00
975d1a4cc0
Merge pull request #1792 from scottsievert/fftconvolve
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Uses fftconvolve instead of convolve2d for speedups
2015-12-14 16:37:18 +11:00
477f39634a
Merge pull request #1825 from stefanv/travis_pyamg
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Re-enable pyamg, since release 3.0.2 closes #1788
2015-12-14 16:36:38 +11:00
084ad3c22b
Merge pull request #1821 from jni/integral-image-fixes
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Add deprecation path to skimage.transform.integrate API change
2015-12-13 20:36:16 -08:00
8be859829e
Re-enable pyamg, since release 3.0.2 closes #1788
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This reverts commit a9b4e78934
2015-12-13 19:52:36 -08:00
Stefan van der Walt