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60 Commits

Author SHA1 Message Date
Stefan van der Walt 246be6c8e2 BUG: Use integer image values as expected in tv denoise test. 2011-10-09 16:37:40 -07:00
emmanuelle 724733f1d6 ENH: give a short definition of rank order in docstring 2011-10-08 19:31:25 +02:00
Emmanuelle Gouillart 7d420da594 Docstring for rank_order 
TODO: write a graphical example using rank_order (reassigning labels
in segmented objects, for example)
 2011-10-07 16:07:35 +02:00
emmanuelle 656962cbc9 Initial integration of CellProfiler's watershed module 2011-10-05 21:13:46 +02:00
Stefan van der Walt ee3e0e3084 Merge pull request #29 from amueller/canny_usability 
ENH: Add sensible defaults for Canny.  Code cleanups.
 2011-09-27 14:52:33 -07:00
Stefan van der Walt f8a0e9e6e7 BUG: Use local lena data file in tv_denoise test. 2011-09-26 21:50:48 -07:00
Stefan van der Walt 2c0f48cd35 TST: Make LPIFilter tests operate on a smaller image, since they take long to execute, and cameraman.png is now bigger than before. 2011-09-26 20:34:25 -07:00
Stefan van der Walt dca93a282f Merge pull request #33 from amueller/median_filter_minor 
Median filter minor cleanup.
 2011-09-26 14:23:16 -07:00
Andreas Mueller 0cec5fcf09 in median filter, rename input data to "image" 2011-09-26 20:21:20 +02:00
Andreas Mueller e9efbbcf16 adjusted default value test to new default values... what does that test do? 2011-09-26 20:15:49 +02:00
Andreas Mueller 82212dd2f7 pep8 2011-09-26 20:13:41 +02:00
Andreas Mueller 4fab810a5e remove unused imports, avoid from x import * 2011-09-26 20:13:41 +02:00
Andreas Mueller dfad24e682 rank filter has radius 2 by default. radius 1 fails ?! 2011-09-26 20:13:41 +02:00
Andreas Mueller e6f660d49d rank filter asserts input is 2d 2011-09-26 20:13:41 +02:00
Stefan van der Walt b0798eb55f ENH: Minor setup.py cleanups. 2011-09-26 11:01:52 -07:00
Andreas Mueller 089485ff93 new canny edge tutorial location 2011-09-26 19:48:25 +02:00
Andreas Mueller 8e33b17b12 pep8, removed unused import and variables 2011-09-26 19:29:44 +02:00
Andreas Mueller fcf4c41bd6 somewhat sensible default values for canny edges 2011-09-26 17:22:13 +02:00
Andreas Mueller 24d771d333 check if input for canny is 2d array, test for error raise. 2011-09-26 17:21:58 +02:00
Andreas Mueller 604296bb51 removed dead link form canny help string 2011-09-26 17:21:25 +02:00
Andreas Mueller 78f16f4264 pep8 2011-09-26 17:21:03 +02:00
Stefan van der Walt bcd7069b7b Merge pull request #17 from emmanuelle/change_repo_name 
Update config files with new repo location. Update build instructions for windows.
 2011-08-29 13:20:39 -07:00
Gael varoquaux 372266601d MISC: Clean ups in TV 2011-08-29 21:31:27 +02:00
Emmanuelle Gouillart 805be0ab3f Name of new github repository in setup.py of submodules 2011-08-29 20:55:00 +02:00
Tony S Yu 8f0f253aeb Fix docstring so Sphinx doesn't complain about indentation. 
Same indentation fix in 3 places, but only one warning fixed because 2 of the fixes are private functions.
 2011-07-18 01:08:23 -04:00
Tony S Yu 8c0d798896 Reorder eps and weight keyword args to tv_denoise 2011-06-23 11:15:31 -04:00
Tony S Yu 680a89e5ce Make test_tv_denoise_2d more strict. 
Original test only checked that tv_denoise reduced the total variation. This change makes sure that the reduction is significant.
 2011-05-31 15:50:09 -04:00
Tony S Yu 637a568ae4 Fix order of keyword arguments to _tv_denoise_2d. 
tv_denoise passes keyword arguments `eps` and `weight` as positional arguments, but the order in _tv_denoise_2d was switched.
 2011-05-31 15:46:02 -04:00
Tony S Yu 65021f481c Remove print statements 2011-05-31 15:40:48 -04:00
Emmanuelle Gouillart a0f7eb51cd documented the input dtype in tv_denoise 2011-05-30 23:11:04 +02:00
Emmanuelle Gouillart edbb4dcc48 Moved the tests of tv_denoise to filter/tests 2011-05-30 22:55:38 +02:00
Emmanuelle Gouillart 13d1a3d111 New module for total variation denoising, for 2D and 3D arrays. 2011-05-28 14:55:01 +02:00
Stefan van der Walt 430821a910 BUG: Correctly convolve integer and floating point arrays. 2011-04-19 17:44:50 +02:00
Stefan van der Walt cbb84d5588 ENH: Minor clean-ups to edge-detection patch. 2011-04-19 14:57:11 +02:00
Pieter Holtzhausen f3dd496d1f Fixed PEP8 and added numpy documentation. 2011-04-18 12:07:27 +02:00
Pieter Holtzhausen 8a35b3f950 Added CellProfiler sobel and prewitt functions. 2011-04-18 00:17:48 +02:00
Dan Farmer 5264e9d1d4 Fix docstrings and one more pep8 issue 2011-04-06 22:11:17 -07:00
Dan Farmer e60d38892e Converted logical ops to bitwise ops and made cosmetic changes wrt pep8 compliance 2011-04-04 22:48:40 -07:00
Dan Farmer 1ce0936e3d Update docs and convert convolution to ndimage sobel function 2011-04-04 21:33:44 -07:00
Dan Farmer 58b632a536 Remove smooth.py for now 2011-04-01 21:35:21 -07:00
Dan Farmer 2961147e27 Format for pep8 compliance, improve documentation, and make mask optional. 2011-03-31 22:42:13 -07:00
Dan Farmer 22f983ce17 Add init entry so importing works right 2011-03-30 14:20:21 -07:00
Dan Farmer 6905ed25b4 Merge Cell Profiler Canny edge detector 2011-03-26 07:39:56 -07:00
Stefan van der Walt 082ff69549 BUG: More Python3 fixes by Christoph Gohlke. 2011-03-14 17:06:22 +02:00
Stefan van der Walt 386ad23f55 DOC: Give credit to Lee Kamentsky and Thouis Jones. 2011-03-13 16:30:24 +02:00
Stefan van der Walt 10dd45d01d ENH: Execute median filter without mask array by default. 2011-03-13 16:26:13 +02:00
Stefan van der Walt 2f11eea665 ENH: Clean up whitespace and remove class in ctmf tests. 2011-03-13 15:52:17 +02:00
Stefan van der Walt 056208c534 DOC: Update median_filter doc to numpy format. 2011-03-13 14:50:11 +02:00
Stefan van der Walt bf89088220 ENH: Stylistic changes. 2011-03-13 14:44:02 +02:00
Stefan van der Walt 9d9cce479b ENH: Remove unnecessary C defines. 2011-03-13 14:24:46 +02:00