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3708 Commits

Author SHA1 Message Date
Johannes Schönberger 4925205082 Improve performance of normalization 2013-03-04 16:26:06 +01:00
Johannes Schönberger eee2342814 Merge pull request #446 from jni/morphology-functions 
Morphology functions
 2013-03-04 06:09:40 -08:00
Johannes Schönberger 2e3f82e9d9 Remove unnecessary statement breaks 2013-03-04 15:01:03 +01:00
Johannes Schönberger dec104e9ff Improve performance and usage of data types of hough circle transformation 2013-03-04 15:00:37 +01:00
Xavier Moles Lopez 0a6b72bfe4 FIX: Fixed test_hed_rgb_roundtrip. 2013-03-04 12:15:35 +01:00
Xavier Moles Lopez 7f5b331f22 FIX: import rgb2hed and hed2rgb in the test_colorconv script. 2013-03-04 12:04:44 +01:00
Xavier Moles Lopez e4629ed856 FIX: modified color.data.ihc docstring. 2013-03-04 11:45:58 +01:00
Xavier Moles Lopez 40e7aee4de FIX: Ran autopep8 on colorconv.py FIX: modified color.data.ihc function FIX: smaller ihc.jpg image 2013-03-04 10:50:17 +01:00
Stefan van der Walt dae9b7adfd STY: Minor cleanup. 2013-03-04 11:30:19 +02:00
Juan Nunez-Iglesias 3249faf308 Add specific error messages and exceptions 2013-03-04 16:54:29 +11:00
Stefan van der Walt 0b97d48742 Merge pull request #444 from jmargeta/MSVC_uint16_fix 
BUG: Fixing MSVC build by adding appropriate typedefs for uint16_t.
 2013-03-03 20:20:45 -08:00
Jan Margeta 3869d1ef8a Removing unnecessary typedefs for uint16_t in MSVC build 2013-03-03 22:45:09 +01:00
Johannes Schönberger dc83c64d44 Change data type of index variables 2013-03-03 15:37:45 +01:00
Juan Nunez-Iglesias 6b9ecd80b9 Add raise and labeled image tests 2013-03-04 01:32:05 +11:00
Juan Nunez-Iglesias b07f7fd9bd Rename function to remove_small_objects 2013-03-04 01:32:05 +11:00
Juan Nunez-Iglesias d6c5ba38ef Improve docstring for remove_small_connected_components 
- Explain behavior if input is of int type.
- Add `Raises` section for possible errors.
- Remove explicit numpy import from example.
 2013-03-04 01:32:05 +11:00
Juan Nunez-Iglesias 5222fb5ff7 Add tests for remove_small_connected_components 2013-03-04 01:32:05 +11:00
Juan Nunez-Iglesias 24b14508c8 Add examples to docstring 2013-03-04 01:32:05 +11:00
Juan Nunez-Iglesias 5686e11c97 Add funct to remove small connected compononents 2013-03-04 01:32:04 +11:00
Stefan van der Walt 6e0112f449 BUG: Recast label output to satisfy ndimage on 32-bit platforms. 2013-03-03 15:34:09 +02:00
Johannes Schönberger 9e10ea75e5 Merge pull request #445 from tonysyu/doc-tweaks 
Doc tweaks
 2013-03-02 23:54:34 -08:00
Tony S Yu 1724fb2351 Change dtype_limits clipping behavior. 2013-03-02 17:40:17 -06:00
Tony S Yu 17e7ba3de7 DOC: Fix Sphinx errors. 2013-03-02 17:22:10 -06:00
Jan Margeta d6d177fec5 Fixing MSVC build by adding appropriate typedefs for uint16_t 2013-03-02 15:39:20 +01:00
Stefan van der Walt b249c00ef0 Merge pull request #431 from sciunto/houghcircle 
ENH: Add circular Hough transform.

Conflicts:
	skimage/transform/_hough_transform.pyx
 2013-03-01 16:56:55 +02:00
spotter 85b1795cdb FIX: Removed unused dependency 2013-03-01 12:17:15 +01:00
spotter 3e6e690590 ENH: Added a short test to validate rgb2hed and hed2rgb conversion 2013-03-01 11:50:10 +01:00
spotter b065580c0a FIX: Simplified deconvolution equations 2013-03-01 11:49:23 +01:00
spotter 74b37dbb05 ENH: Added rgb2hed and hed2rgb to __all__ list 2013-02-28 16:26:57 +01:00
spotter 997870ce23 FIX: the rgb2hed function. Legal issues regarding the ihc image. ENH: added the hed2rgb function. 2013-02-28 16:15:15 +01:00
Stefan van der Walt ef5325502d Merge pull request #438 from ahojnnes/warp-fix 
RF: Remove duplicate return statement and deprecated function.
 2013-02-27 07:22:25 -08:00
Johannes Schönberger 374a967ffc Remove deprecated tests for homography 2013-02-27 08:45:45 +01:00
Tony S Yu dd08c8cd83 Fix return value of deprecated equalize function. 2013-02-26 20:34:29 -06:00
spotter 306c886ad6 ENH: Added an Immunohistochemical image example 2013-02-26 17:26:12 +01:00
Johannes Schönberger f2d91d2c29 Remove deprecated import of hompgraphy 2013-02-26 16:57:43 +01:00
spotter ae685075e1 ENH: Adding color deconvolution method to convert to an Haematoxylin-Eosin-DAB colorspace 2013-02-26 16:25:42 +01:00
Johannes Schönberger 72e1d20a29 Remove deprecated homography function 2013-02-26 12:22:13 +01:00
Johannes Schönberger c2023e9975 Remove duplicate return statement 2013-02-26 12:12:02 +01:00
François Boulogne 86f777ae3d hough transform for circles 2013-02-25 23:01:44 +01:00
François Boulogne ecb762c9e4 bugfix dim + unittest 2013-02-25 22:56:28 +01:00
François Boulogne 928468b999 variable in cdef 2013-02-25 22:56:28 +01:00
François Boulogne de6e63de2e use a single array 2013-02-25 22:56:28 +01:00
François Boulogne 99e2997337 declare cython variables 2013-02-25 22:56:27 +01:00
François Boulogne 5161687730 various minor fixes 2013-02-25 22:56:27 +01:00
François Boulogne 88eaaad9c7 add blank line 2013-02-25 22:56:27 +01:00
François Boulogne 12c1bf8883 add unittest for hough circle 2013-02-25 22:55:59 +01:00
François Boulogne a997195881 hough transform for circles 2013-02-25 22:55:59 +01:00
Stefan van der Walt 00c023d814 Merge remote-tracking branch 'cgohlke/patch-2' into msvc_build_fix 
Conflicts:
	skimage/filter/rank/_crank16.pyx
	skimage/filter/rank/_crank8.pyx
 2013-02-25 09:20:05 +02:00
Stefan van der Walt a17d8182aa PKG: MSVC build fixes by Christoph Gohlke. 2013-02-25 06:52:04 +02:00
Stefan van der Walt 746d9f6b36 Merge pull request #435 from ahojnnes/cnp 
RF: Globally change np to cnp if cimported.
 2013-02-24 11:55:32 -08:00