Nelson Brown
9cd9a1372a
Address reviewer comments
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Add newline at EOF of selem.py
Add "optional" to grey.py and binary.py
2014-07-11 15:19:33 -07:00
Tony S Yu
4c000c4d89
Use normal deprecation warning
2014-07-11 17:01:54 -05:00
Nelson Brown
1ef556b710
Remove unnecessary whitespace
2014-07-11 14:51:57 -07:00
Tony S Yu
879c2c7f36
Add tests for intensity_range and rename parameter
2014-07-11 16:30:18 -05:00
Nelson Brown
54aff88bd0
Add docstring for default structuring element
2014-07-11 14:10:18 -07:00
Nelson Brown
bb732c9225
Add default structuring element to morphology
2014-07-11 13:50:55 -07:00
blink1073
35dcdd5315
Move random seed prior to first random() call
2014-07-06 07:49:36 -05:00
blink1073
5ef3f95d71
Add random seeds to tests per #1044
2014-07-05 12:49:42 -05:00
Charles Harris
7a074d5dd1
BUG: Fix slicing error revealed by numpy 1.9.0.
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Numpy 1.9.0 no longer allows oversize data to be assigned to a
boolean indexed 1-d array by discarding excess elements.
Closes #1050 .
2014-07-04 20:12:46 -06:00
Juan Nunez-Iglesias
6887f2cb90
Merge pull request #1031 from vighneshbirodkar/rag
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Add region adjacency graphs (RAGs)
This PR introduces a dependency to the NetworkX library.
2014-07-02 22:24:09 -07:00
Vighnesh Birodkar
df1d61e461
Spelling correction.
2014-07-03 09:55:17 +05:30
Vighnesh Birodkar
fb706d12d5
made RAG public and hyperlinked networkx.Graph documentation
2014-07-03 01:55:09 +05:30
Vighnesh Birodkar
a4bf278c5b
Doctest Passing
2014-07-03 00:26:22 +05:30
Vighnesh Birodkar
e558854dec
docstring change
2014-07-02 23:28:14 +05:30
Vighnesh Birodkar
c1cf8e6347
Got doctest to pass and docstring changes
2014-07-02 23:13:17 +05:30
Vighnesh Birodkar
6003ab2c7d
Typos
2014-07-02 00:31:01 +05:30
Vighnesh Birodkar
486f935db8
Rename methods and edit docstrings
2014-07-02 00:19:11 +05:30
Kevin Murray
4160a67a42
[skimage.io.tests] add truncated jpg imread tests
2014-06-30 19:35:35 +10:00
Kevin Murray
83d0717986
[test_freeimage] Allow ValueError to be raised
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With the truncated image, sometimes ValueError is raised. This allows
either RuntimeError (i.e. libfreeimage error) or ValueError to be
raised.
2014-06-30 18:47:31 +10:00
Kevin Murray
7d9f9c46d9
[test_freeimage.py] remove extraneous statements
2014-06-30 14:45:51 +10:00
Kevin Murray
d69cdb951b
[freeimage tests] Add a test w/ truncated image
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This tests tests the fix in the previous commit b9a7445 , covering the
issue noted in issue #1037 .
2014-06-30 14:45:51 +10:00
Vighnesh Birodkar
6abf194dd6
Use sets instead of dictionaries in merge_nodes
2014-06-28 21:02:25 +05:30
Vighnesh Birodkar
dd67b3fce7
Changed max_edge in example/plot_rag.py
2014-06-28 11:06:30 +05:30
Vighnesh Birodkar
f71ad51f57
Got Py3 test to pass
2014-06-28 10:35:14 +05:30
Vighnesh Birodkar
87465d91d7
test_rag.py formatting
2014-06-28 01:39:28 +05:30
Vighnesh Birodkar
e63ae9450a
merge_nodes docstring change
2014-06-28 01:35:41 +05:30
Vighnesh Birodkar
1982a3246c
Docstring changes.
2014-06-28 01:32:55 +05:30
Vighnesh Birodkar
c8480d3f6d
Change merge_nodes code and test case
2014-06-28 01:17:44 +05:30
Kevin Murray
b9a7445296
[skimg.io._plugins.freeimage_plugin] fix segfault
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I have moved the freeimage error handler callback function to the module
namespace to prevent it being garbage collected. See the following for
more info on this quirk of ctypes:
http://stackoverflow.com/questions/12995925/how-to-prevent-functype-from-being-collected
https://github.com/JohannesBuchner/PyMultiNest/issues/5
This also changes the way FreeImage errors are handled. If an exception
is raised in a callback, it will not propagate beyond ctypes internals.
Now, we use a callback that sets a global variable to indicate error. We
then check for error and reset the error string to NULL every time the
C api is called. This is the only way we can both:
a) Not segfault on freeimage error
b) Pass the freeimage error to the user
c) raise RuntimeError()
2014-06-27 21:26:58 +10:00
Vighnesh Birodkar
c08a6876d6
Added comment about footprint
2014-06-26 02:05:20 +05:30
Vighnesh Birodkar
bb874074c4
None comparison
2014-06-26 00:58:54 +05:30
Vighnesh Birodkar
b1284ee180
update test for py3
2014-06-26 00:57:50 +05:30
Vighnesh Birodkar
cbfa8aa6e1
docstring corrections
2014-06-26 00:54:16 +05:30
Vighnesh Birodkar
b1f59fceee
Changed prototype of weight_func
2014-06-26 00:11:49 +05:30
Vighnesh Birodkar
bd9ab8f0fd
Switch label_image to labels
2014-06-23 23:04:16 +05:30
Vighnesh Birodkar
27831d8e2f
Formatting and docstring changes
2014-06-23 22:26:53 +05:30
Vighnesh Birodkar
66d3ec3831
removed commented stataments
2014-06-23 01:28:10 +05:30
Vighnesh Birodkar
c14021a9cb
Formatting and typos
2014-06-23 01:16:57 +05:30
Vighnesh Birodkar
a1bc2e95fd
Made test Python3 compatible
2014-06-23 01:15:00 +05:30
Vighnesh Birodkar
0efca40747
Added connectivity parameter and a function input to merge_nodes
2014-06-23 00:58:13 +05:30
Vighnesh Birodkar
3db0a2f81f
Naming changes and formatting
2014-06-22 20:27:44 +05:30
Vighnesh Birodkar
319530fb89
Used mapping in graph_cut.py
2014-06-22 19:48:52 +05:30
Vighnesh Birodkar
0e35c422b3
Graph can now merge non adjacent nodes
2014-06-22 13:58:00 +05:30
Vighnesh Birodkar
711de464e5
Formatting changes
2014-06-19 18:03:44 +05:30
Vighnesh Birodkar
76d3dbad57
added merge_nodes test
2014-06-19 17:57:07 +05:30
Vighnesh Birodkar
d0e7a26f6f
Added RAG merge_nodes test case
2014-06-19 16:36:17 +05:30
Vighnesh Birodkar
20cefcf50a
Added comments and switched try with if
2014-06-19 16:18:53 +05:30
Vighnesh Birodkar
410aecb354
type casting to double instead of long
2014-06-19 02:50:25 +05:30
Vighnesh Birodkar
53330496f8
Added references
2014-06-19 02:50:25 +05:30
Vighnesh Birodkar
78397bf54d
reverted benfo.info and setup.py
2014-06-19 02:50:25 +05:30