a751c7c2af
Merge pull request #473 from ahojnnes/feature-refs
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DOC: Fix reference syntax for corner detectors.
2013-03-19 04:47:24 -07:00
18b3d1f7e3
Fix reference syntax for corner detectors
2013-03-19 09:33:10 +01:00
9968dfd8fe
Merge pull request #467 from malcolmreynolds/fix-num-peaks-typo
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FIX: number of peaks returned from feature.corner_peaks
2013-03-18 08:55:17 -07:00
042b75d05f
FIX: changed xrange to range so Python 3 works.
2013-03-18 15:31:45 +00:00
920e41398d
FIX: move corner detection outside loop in test_num_peaks.
2013-03-18 15:23:35 +00:00
0fde67bb56
TEST: added test for num_peaks kwarg in peak_local_max.
2013-03-18 15:13:18 +00:00
7b0fd4a5d8
Merge pull request #470 from ahojnnes/regionprops-example
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Replace ndimage with skimage.transform.* functions in examples
2013-03-17 20:52:18 -07:00
f80cd8114b
Replace ndimage.zoom function in radon transform example with builtin skimage function
2013-03-17 10:57:08 +01:00
045f64a00d
Explicitly import local_binary_pattern function
2013-03-17 10:54:35 +01:00
c475581aa2
Replace rotate function of local binary pattern example with builtin skimage function
2013-03-17 10:54:05 +01:00
7f755e83db
Remove unused import
2013-03-17 10:50:32 +01:00
96f08e68d0
Use nearest neighbour interpolation to avoid different labels
2013-03-17 10:48:59 +01:00
874c5647bc
Replace scipy.ndimage routine with skimage.ndimage.rotate
2013-03-17 10:47:18 +01:00
dabb2b682d
Merge pull request #468 from ahojnnes/rotate-doc
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Fix parameter list format error of rotate
2013-03-16 11:48:18 -07:00
c5bdf00e82
Fix parameter list format error of rotate
2013-03-16 18:03:04 +01:00
a3d73bdd61
DOC: minor fix ellipse_perim.
2013-03-16 13:25:01 +01:00
44095eef81
FIX: number of peaks returned from feature.corner_peaks
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corner_peaks accepted a num_peaks argument, but the call
to peak_local_max inside the function used np.inf instead
of the value of this keyword argument, leading to an unbounded
number of peaks being returned.
2013-03-15 18:50:43 +00:00
a41d74caa4
Merge pull request #441 from spotter/color_deconv
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ENH: Adding color deconvolution for immunohistochemical images.
2013-03-14 06:04:22 -07:00
f956f3257d
FIX: Added myself in CONTRIBUTORS.txt
2013-03-14 13:59:15 +01:00
d0a15a7cf9
FIX: Example in combine_stains docstring.
2013-03-13 15:14:39 +01:00
bad3915d2a
Merge pull request #463 from ahojnnes/pdf-docs
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DOC: Fix LaTeX documentation.
2013-03-13 07:02:38 -07:00
b75776cc2e
ENH: Updated stain separation function docstrings and added matrices to __all__
2013-03-13 14:35:16 +01:00
5e67572ac7
Do not set paper size to allow manual setting through make
2013-03-13 12:16:58 +01:00
1d9fb145f6
Avoid duplicate python module index
2013-03-13 12:09:39 +01:00
169d945534
Fix make.bat
2013-03-13 12:08:08 +01:00
d68515f0d8
Copy some useful latex settings from NumPy
2013-03-13 12:03:44 +01:00
3f31b48fe1
Use plot_directive from matplotlib.sphinxext if available
2013-03-13 11:10:03 +01:00
97d7f88b04
Explicitly set latex font size and paper size
2013-03-13 11:08:02 +01:00
16863535eb
Re-enable plots in doc strings and generate PDF images for them
2013-03-13 10:59:26 +01:00
b1628e07ad
fix comment
2013-03-12 20:31:33 +01:00
74acdc9fa9
FIX: changed unicode dash in docstrings.
2013-03-12 17:09:17 +01:00
08668156c2
Merge pull request #462 from ahojnnes/deprecated-doc-string
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DOC: Change deprecated decorator to display warning in doc string.
2013-03-12 08:42:31 -07:00
6f7158046f
FIX: combine_stains docstring.
2013-03-12 16:41:02 +01:00
b3e557b550
FIX: using the new stain separation functions for the special case of hed.
2013-03-12 16:19:51 +01:00
c43986d6d6
ENH: Adding tests for new stain separation functions.
2013-03-12 16:15:41 +01:00
f48097c5ca
FIX: fixed docstrings. ENH: Added new stain separation matrices.
2013-03-12 16:06:32 +01:00
20f27345c3
FIX: rgb2hed and hed2rgb can work with both signed and unsigned image.
2013-03-12 14:22:53 +01:00
0324737c47
Fix some doc strings for latex docs
2013-03-12 09:39:42 +01:00
a1ad4ca34b
Change latex doc settings
2013-03-12 09:39:00 +01:00
b82764583a
Increase list-depth for nested quotes etc.
2013-03-12 09:36:33 +01:00
d01b14f2ff
Add API documentation to latex docs
2013-03-12 09:12:13 +01:00
332c21f979
Make deprecation warning in doc string bold
2013-03-12 07:29:39 +01:00
a0d9d3f213
Use double instead of single quotes for doc string
2013-03-12 07:28:15 +01:00
0cb0fee339
Remove duplicate code for alternative function
2013-03-11 23:21:52 +01:00
483ebae0c0
Change deprecated decorator to display warning in doc string
2013-03-11 23:18:54 +01:00
0fd2f355b2
FIX: Link to Ruifrok reference
2013-03-11 21:02:24 +01:00
dd597fc526
Merge pull request #460 from jni/raise-type
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BUG: Revert `remove_small_objects` to raise TypeError.
2013-03-10 21:42:45 -07:00
b306f9b70f
Revert remove_small_objects to raise TypeError
2013-03-10 19:23:04 +11:00
5b25e7e961
FIX: Replaced non-ascii double quotes in Ruifrok reference.
2013-03-09 13:23:36 +01:00
f66c8b5e3b
ENH: Added example to the gallery for ihc staining separation
2013-03-08 15:59:40 +01:00
Stefan van der Walt