Josh Warner
5c73432101
Merge pull request #770 from cgohlke/patch-3
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BUG: Fix ValueError: Buffer dtype mismatch, expected 'long' but got...
2013-10-11 00:13:53 -07:00
cgohlke
4d46bc0912
TST: Fix ValueError: Buffer dtype mismatch, expected 'intp_t' but got 'long'
2013-10-10 21:51:56 -07:00
cgohlke
458556723d
BUG: Fix ValueError: Buffer dtype mismatch, expected 'long' but got 'long long'
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on win-amd64
2013-10-10 21:48:29 -07:00
Johannes Schönberger
ee24f1c2c5
Improve example of warp function to show all available options
2013-10-02 17:45:05 +02:00
Johannes Schönberger
40f5e78353
Add support for matrix as inverse_map
2013-10-02 17:33:17 +02:00
Johannes Schönberger
9741bfda15
Add note about internal usage of transformation matrix
2013-10-02 17:17:03 +02:00
Johannes Schönberger
beeb597ddf
Only clip for ndimage.map_coordinates case
2013-10-02 17:10:46 +02:00
Johannes Schönberger
c01e7c9b10
Fix various doc strings using the warp function
2013-09-28 14:39:40 +02:00
Johannes Schönberger
a17a1395c3
Fix doc string of warp functions
2013-09-28 14:25:45 +02:00
Ankit Agrawal
0ed1e22034
Correcting bug in SimialarityTransform
2013-09-19 10:23:03 +05:30
Johannes Schönberger
5f82c206b4
Fix bugs in usage of typed memoryviews
2013-08-19 19:31:40 +02:00
Johannes Schönberger
c8f619e384
Use typed memoryviews in transform package
2013-08-19 19:22:28 +02:00
Stefan van der Walt
be14f0b28c
Merge pull request #654 from josteinbf/radon-square-center
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Define rotation axis center for Radon transforms with inverses.
2013-08-06 02:04:32 -07:00
Johannes Schönberger
6dd35c8166
Merge pull request #641 from sciunto/example_ht
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Example Hough transform (ellipse)
2013-08-05 12:22:57 -07:00
Josh Warner
a3bb1098d1
Merge pull request #632 from ahojnnes/local-blocks
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Refactor N-dimensial array resampling and add additional functionality
2013-07-31 14:10:18 -07:00
Johannes Schönberger
109f500d4b
Replace deprecated import of _local_func with block_reduce
2013-07-25 22:15:23 +02:00
Jostein Bø Fløystad
d5b72f91ab
iradon: Do not suppress 0 frequency for filter=None.
2013-07-14 17:40:17 +02:00
Jostein Bø Fløystad
4549204507
iradon: Clean up filter code.
2013-07-14 17:39:48 +02:00
Jostein Bø Fløystad
60444ee4d3
Radon transform: PEP8 fixes.
2013-07-13 20:32:15 +02:00
Jostein Bø Fløystad
462173a53a
Radon transform: Include boundary in reconstruction circle.
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A test criterion needed to be relaxed slightly to have tests still
passing. This is ok, as the reconstruction circle is now larger, meaning
larger errors should be expected. Moreover, the test in question uses
random data, and changing the seed causes greater changes in accuracy
than the amount the test criterion was relaxed by.
2013-07-13 20:32:15 +02:00
Jostein Bø Fløystad
288ee69483
radon: Correct docstring of order_angles_golden_ratio.
2013-07-13 20:32:15 +02:00
Jostein Bø Fløystad
41c6f6d740
radon: Reduce duplication; simplifications.
2013-07-13 20:32:13 +02:00
Jostein Bø Fløystad
47b6d0c5a6
Radon transform: Document rotation axis location.
2013-07-13 20:31:28 +02:00
Jostein Bø Fløystad
2bfaafd9e2
Radon transform: Redefine projection center for sinograms.
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This definition is chosen because it is simple to express in the
documentation. No changes in accuracy are to be expected, but comparing
sinograms and reconstructions before and after this commit will give
different results in the cases where ``circle=False`` for ``radon`` or
``iradon``.
2013-07-13 19:31:43 +02:00
Jostein Bø Fløystad
4d307f5315
iradon_sart: Fix docstring typo.
2013-07-09 11:44:28 +02:00
Jostein Bø Fløystad
1cc42bd943
iradon_sart: Reformat references.
2013-07-09 11:44:03 +02:00
Jostein Bø Fløystad
18a06a0add
iradon_sart: Format docs correctly.
2013-07-08 14:50:06 +02:00
François Boulogne
c2193cbc34
fix doctest
2013-07-07 10:42:32 +02:00
Jostein Bø Fløystad
bea50aa608
iradon: use util.pad for sinogram padding.
2013-07-06 20:55:54 +02:00
Jostein Bø Fløystad
b3746b9090
iradon: Cleanup by locating related code in one place.
2013-07-06 20:55:54 +02:00
Jostein Bø Fløystad
643a1bc1f5
iradon: Add test for cubic interpolation.
2013-07-06 20:55:53 +02:00
Jostein Bø Fløystad
b90ba783ef
iradon: Only allow interpolation methods working well.
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Of the interpolation methods provided by scipy.interpolate.interp1d,
only cubic has been found to work well with the tests in skimage (other
methods are either identical to linear or nearest, or they produce bad
reconstructions).
2013-07-06 20:55:53 +02:00
Jostein Bø Fløystad
2be327815e
radon: Use numpy.interp/scipy.interpolate.
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Scipy supports all interpolation kinds (nearest, linear) we need, while
numpy supports only linear interpolation. The numpy interpolation is
substantially faster, so this is used even though it complicates the
code slightly.
2013-07-06 20:55:53 +02:00
Jostein Bø Fløystad
5955e4e612
iradon: Reduce code duplication.
2013-07-06 20:55:53 +02:00
Jostein Bø Fløystad
ac460a9777
iradon: Use util.pad for array padding.
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This depends on util.pad accepting 0s in pad_width, which has a proposed
solution in gh-634.
2013-07-06 20:55:53 +02:00
Jostein Bø Fløystad
237fb989b0
radon: Use util.pad for array padding.
2013-07-06 20:55:53 +02:00
Josh Warner
6edd707a1b
Merge pull request #637 from sciunto/minorfix
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STYLE : PEP8 + import fix in hough_transform tests
2013-07-06 11:06:48 -07:00
François Boulogne
cf3efba3c1
use previous import
2013-07-06 16:12:09 +02:00
François Boulogne
2dfeab83df
PEP8 + import
2013-07-06 13:49:01 +02:00
Johannes Schönberger
06aaf93e63
Use pad function and add option to define cval
2013-07-05 17:59:27 +02:00
Johannes Schönberger
b7f72ff15f
Fix deprecated function name referneces in doc strings
2013-07-05 17:34:38 +02:00
Johannes Schönberger
4f6b39dcd3
Rename block_* functions to local_*
2013-07-05 17:34:38 +02:00
Johannes Schönberger
c0a019eb12
Update test cases for block functions
2013-07-05 17:34:38 +02:00
Johannes Schönberger
5579aa2298
Fix doc string examples
2013-07-05 17:34:38 +02:00
Johannes Schönberger
04b14b42c9
Refactor local block functions and add additional functionality.
2013-07-05 17:34:38 +02:00
Jostein Bø Fløystad
3cdfeccc7a
iradon_sart: flip signs to reflect changes to radon.
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The changes to radon were introduced in gh-596.
2013-07-05 13:14:39 +02:00
Jostein Bø Fløystad
af47941435
iradon_sart: fix comment spelling.
2013-07-05 13:14:39 +02:00
Jostein Bø Fløystad
f2790d658c
iradon_sart: redefine projection center.
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This reflects the bugfixes related to issue gh-592 implemented in
gh-596.
2013-07-05 13:14:39 +02:00
Jostein Bø Fløystad
06857d3b92
Radon tests: Check the correct error metric.
2013-07-05 13:14:39 +02:00
Jostein Bø Fløystad
a4870242b6
iradon_sart: Test clip functionality and add a test for it.
2013-07-05 13:14:39 +02:00