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4322 Commits
Author SHA1 Message Date
Juan Nunez-Iglesias 62d6a3d7e9 Merge pull request #1340 from blink1073/fix-filter-pkg-shim 
Fix Filter Package Shim Implementation
 2015-01-16 15:23:45 +11:00
Steven Silvester 6339eff8fe Fix filter package shim implementation 2015-01-15 21:17:40 -06:00
Juan Nunez-Iglesias 879a7b0bb5 Update treatment of convert2lab in slic 
It still defaults to `True` but only when the last dimension of the
input array could be construed as RGB.

Also, update ValueError description in docstring.
 2015-01-16 13:11:25 +11:00
Juan Nunez-Iglesias c102a0bf0e Add reference to SLIC0 in SLIC docstring 2015-01-16 12:08:13 +11:00
Steven Silvester 87998d6518 Update docstring and create test module setup function 2015-01-15 18:57:18 -06:00
Juan Nunez-Iglesias 61d9812cd8 Don't create superfluous ip variable 2015-01-15 23:31:51 +11:00
Juan Nunez-Iglesias 5d115209b5 Create new figure for each imshow test 2015-01-15 23:07:09 +11:00
Juan Nunez-Iglesias 7b2dbcb15b Expand the docstring for imshow 2015-01-15 22:39:50 +11:00
Juan Nunez-Iglesias c6dff6942d Don't create new plot automatically 
This behavior is a bit too magical and may interfere with creation of
interactive ImageCollection browsers, for example.
 2015-01-15 22:26:55 +11:00
Juan Nunez-Iglesias e472009090 Add test for signed images 2015-01-15 22:26:17 +11:00
Juan Nunez-Iglesias 2bdd239496 Overhaul imshow to clarify flow 2015-01-15 22:25:41 +11:00
Juan Nunez-Iglesias 30c522e706 Use different colormaps depending on input image 2015-01-15 20:16:24 +11:00
Juan Nunez-Iglesias 400c3fd202 Rename ax to ax_im in mpl imshow plugin 2015-01-15 15:44:55 +11:00
Juan Nunez-Iglesias 9fe4f33793 Add tests for nonstandard images 2015-01-14 20:29:15 +11:00
Juan Nunez-Iglesias 176889933f Add tests for io.imshow mpl plugin 2015-01-14 20:13:32 +11:00
Juan Nunez-Iglesias 984e22b47a Replace Axes with AxesImage where relevant 2015-01-14 20:13:32 +11:00
Juan Nunez-Iglesias fab4ff2305 Fix incorrect call to colorbar 2015-01-14 20:13:32 +11:00
Juan Nunez-Iglesias c68c8e5468 Improve mpl imshow plugin docstring 2015-01-14 20:13:32 +11:00
Juan Nunez-Iglesias fac8fde9dc Overhaul matplotlib imshow plugin 
- images are displayed within their native dtype range,
- unless they are outside of their range (e.g. a float image with
  values greater than 1) or they are of an unsupported dtype (e.g.
  a uint64 image), in which case the dynamic range of the display
  corresponds to the image range,
- which is also done for images with extremely low contrast for their
  native range (e.g. float images in [1e-7, 5e-7].

In the latter two cases, a colorbar is also displayed and a warning is
raised.

Finally, we return the axes object on which the image is plotted, to
enable further plotting in the matplotlib new OO style.
 2015-01-14 20:13:32 +11:00
Juan Nunez-Iglesias 8f4d0247b5 Add docstring to matplotlib imshow plugin 
The image is now named as an argument, and the axes are returned, in
keeping with matplotlib convention.
 2015-01-14 20:13:32 +11:00
Juan Nunez-Iglesias eab2168846 Add test to ensure default bg_color in label2rgb 2015-01-14 10:05:22 +11:00
Juan Nunez-Iglesias 9438b96774 Add default bg_color to label2rgb 2015-01-14 09:59:15 +11:00
emmanuelle 8b9a777c79 Bug correction: I had forgotten to add __init__.py 2015-01-11 22:37:42 +01:00
emmanuelle c5e38dc5b1 Renamed module, since tests were breaking because module and function 
had the same name.
 2015-01-10 19:11:15 +01:00
emmanuelle ecaa959195 Implemented asymmetric distance computation to save speed factor of 2 2015-01-10 16:40:43 +01:00
emmanuelle 1d8e02bf38 Removed normalization of h parameters because float images will be 
normalized anyway.
 2015-01-10 12:15:26 +01:00
Steven Silvester d714d0bcbc Separate qt version check from has_qt flag 2014-12-30 21:01:23 -06:00
Phil Schaf 14a2b5d8f3 fixed Qt5 compat 2014-12-30 17:57:19 +01:00
Steven Silvester 51ab675d3c Fix lingering merge issue 2014-12-27 11:11:36 -06:00
Steven Silvester f89ab053e1 Merge pull request #1314 from SalvatoreScaramuzzino/RectTool_docs 
Rect tool docs
 2014-12-27 11:01:08 -06:00
Steven Silvester 67fadc0ed8 Fix mock Qt objects again 2014-12-27 10:54:19 -06:00
Steven Silvester 42b330e562 Add QWidget to the mock Qt 2014-12-27 10:54:19 -06:00
Steven Silvester 8da175d70e Add dummy Qt properties 2014-12-27 10:54:19 -06:00
Steven Silvester c3ade4416f Instantiate QtCore dummy class 2014-12-27 10:54:18 -06:00
Steven Silvester 7474db1f0d Another fix for dummy Signal 2014-12-27 10:54:18 -06:00
Steven Silvester 6d445776c9 Fix the dummy Signal 2014-12-27 10:54:18 -06:00
Steven Silvester 11c6a9f86a Fix another viewer import 2014-12-27 10:54:18 -06:00
Steven Silvester 2eee1faaff Fix import error in viewer.utils.core 2014-12-27 10:54:18 -06:00
Steven Silvester 6f57873526 Do not use ImportError behaviour in viewer 
Conflicts:
	skimage/viewer/tests/test_tools.py
 2014-12-27 10:54:13 -06:00
Steven Silvester 8d40cbd1d2 Allow viewer package to import without Qt 2014-12-27 10:52:30 -06:00
Steven Silvester 68508576f6 Remove debug raise 2014-12-27 10:52:30 -06:00
Steven Silvester 297ccea8b0 Do not try and guess the mpl backend 2014-12-27 10:52:30 -06:00
Steven Silvester 47065d733c Use a smarter backend selection 2014-12-27 10:52:30 -06:00
Steven Silvester 65c1d4eec6 Update viewer for PyQt5 compatibility 
Conflicts:
	skimage/viewer/tests/test_plugins.py
	skimage/viewer/tests/test_tools.py
 2014-12-27 10:52:27 -06:00
Steven Silvester b7f4f61ae7 Remove unnecessary measure.label shim 
Conflicts:
	skimage/measure/_label.py
 2014-12-26 21:34:33 -06:00
Juan Nunez-Iglesias 7b5dd3b700 Merge pull request #1313 from blink1073/suppress-test-warnings 
Handle expected test warnings.
 2014-12-27 14:26:59 +11:00
Steven Silvester ecc582193a Try using matplotlib cleanup decorator 2014-12-26 20:55:44 -06:00
Steven Silvester a7a84bbcde Draw the canvas when creating the ax to avoid RuntimeError 2014-12-26 20:14:41 -06:00
Steven Silvester f898bd0209 Style fixes 2014-12-26 11:26:30 -06:00
salvatore ac52af7d83 removed numpy import and spaces 2014-12-26 12:12:15 +01:00