Tony S Yu
c17ffe6c32
Merge pull request #351 from ahojnnes/test-coverage
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Test coverage
2012-10-09 14:51:23 -07:00
Johannes Schönberger
9b5cb1ca8a
Merge pull request #360 from tonysyu/fix-doctest-imports
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DOC: Add imports to doctests to fix errors
2012-10-08 22:50:38 -07:00
Tony S Yu
ab2411cd19
DOC: Add imports to doctests to fix errors
2012-10-08 20:30:33 -04:00
Paul Ivanov
b4b090271d
complete singularization of scikit-image
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I've updated references in the code and documentation to the new name.
2012-10-08 16:29:55 -07:00
Johannes Schönberger
0ab93bbf36
Remove redundant dtype conversion
2012-10-06 21:54:12 +02:00
Johannes Schönberger
48572fd0a3
Remove obsolete license note as code has been refactored
2012-10-06 21:52:15 +02:00
Andreas Mueller
6c59e04714
MISC remove unused imports, some pep8 corrections.
2012-09-27 20:01:45 +01:00
Tony S Yu
538ce329a5
DOC: fix numpy dtype print out.
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This fix may be very dependent on numpy version since print out has change over time.
2012-09-11 23:47:18 -04:00
Johannes Schönberger
56b1476789
Add test case for non-square images
2012-09-11 20:27:18 +02:00
Johannes Schönberger
f478b6a397
Fix bug in binary dilation and test case
2012-09-11 20:11:55 +02:00
Johannes Schönberger
b1d99be735
Fix bug in grey erosion and dilation
2012-09-11 09:09:10 +02:00
Tony S Yu
84ac91927d
DOC: Fix citation syntax
2012-09-02 18:03:55 -04:00
Tony S Yu
8b15656feb
Change import to silence import errors in docs.
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`import skimage` in submodules seems to cause issues with Sphinx autodocs. (Maybe some sort of circular import issue.) Note the `ImportErrors` fixed by this commit don't actually cause sphinx build errors; Sphinx seems to capture the errors, but it's annoyingly noisy, nonetheless.
2012-09-02 12:23:52 -04:00
Johannes Schönberger
aa08e8a559
Fix for predefined output array
2012-09-02 13:41:25 +02:00
Johannes Schönberger
2c37c70ca3
Fix support for predefined output array
2012-09-02 13:35:12 +02:00
Johannes Schönberger
373b3293ee
Use numpy testing functions
2012-09-02 13:28:07 +02:00
Johannes Schönberger
de47332bd2
Add fast morphological operations for binary images
2012-09-02 13:25:52 +02:00
Johannes Schönberger
2842515dc3
Improve doc string layout
2012-09-02 10:34:09 +02:00
Johannes Schönberger
224fcb5d01
Convert selem to uint8
2012-09-02 09:58:02 +02:00
Johannes Schönberger
a5fe574bd9
Remove unused imports and add missing types
2012-09-01 14:57:56 +02:00
Johannes Schönberger
b05c062d24
Refactor erosion and dilation for better performance
2012-09-01 14:54:17 +02:00
Emmanuelle Gouillart
0644026250
Fixed two tests that were failing because of draw imports
2012-08-27 12:04:30 +02:00
Tony S Yu
7d8bc48378
ENH: Change assert statement for better error output
2012-08-26 16:36:28 -04:00
Tony S Yu
8084faf1f6
BUG: Fix division error for Python 3
2012-08-26 16:33:25 -04:00
Tony S Yu
69207c003b
BUG: fix import of rank_order
2012-08-25 14:06:20 -04:00
Tony S Yu
e350db23a2
Change reconstruction to support Cython 0.15.
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This removes use of Cython's typed memoryviews.
This reverts commit b5d9106966 : "ENH: Use Cython data types instead of Numpy dtypes."
Conflicts:
skimage/morphology/_greyreconstruct.pyx
2012-08-25 14:04:48 -04:00
Stefan van der Walt
ce423e169e
Merge pull request #257 from ahojnnes/shared
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ENH: Add shared package.
2012-08-25 10:35:29 -07:00
Stefan van der Walt
544fec7560
Merge pull request #215 from tonysyu/morph-reconstruction
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ENH: Add morphological reconstruction.
2012-08-25 07:42:36 -07:00
Tony S Yu
945349f963
DOC: Improve description of reconstruction
2012-08-25 08:48:03 -04:00
Johannes Schönberger
878554ac35
Fix indentation
2012-08-21 15:45:18 +02:00
Johannes Schönberger
c471d475eb
Refactor pnpoly function in Cython and add to shared package
2012-08-21 15:43:26 +02:00
Stefan van der Walt
1c3aeec2a8
BUG: Remove uses of xrange for py3 compatibility.
2012-08-20 15:25:40 -07:00
Stefan van der Walt
39569e8f9e
Merge pull request #256 from NeilYager/skeleton_fix
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BUG: Fix skeletonize LUT.
2012-08-20 14:50:51 -07:00
Stefan van der Walt
b4fa79d6dd
Merge pull request #206 from amueller/felsenzwalb
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ENH: MRG Segmentation algorithms.
2012-08-20 14:43:33 -07:00
Neil Yager
d7d1faec46
Fix bug in skeletonize LUT
2012-08-20 21:56:10 +01:00
Tony S Yu
682f064f86
DOC: Fix docstring to match rank order.
2012-08-19 16:23:14 -04:00
Tony S Yu
b5d9106966
ENH: Use Cython data types instead of Numpy dtypes.
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Conversion to Memoryviews didn't improve performance, unfortunately. Minor slow-down of 5--10%.
2012-08-19 11:56:16 -04:00
Tony S Yu
b614b34eab
ENH: Add test of reconstruction by erosion.
2012-08-18 23:20:49 -04:00
Tony S Yu
79fca0e20d
DOC: Reorder docstring sections.
2012-08-18 21:54:06 -04:00
Tony S Yu
ab7626da3d
STY: Rename variables for clarity.
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In particular, it wasn't clear whether `image` was the seed image or the mask image rnd `values` was used to refer to both image intensity values and their rank-order.
2012-08-18 21:41:01 -04:00
Tony S Yu
7a56a7f35e
DOC: Clarify code comments and docstring
2012-08-18 18:04:01 -04:00
Tony S Yu
969772c036
ENH: Add reconstruction by erosion.
2012-08-18 17:59:44 -04:00
Tony S Yu
29c84a8a7b
STY: Rename returned image to distinguish input from output.
2012-08-17 23:02:08 -04:00
Tony S Yu
33a19a8c7b
DOC: add comments to clarify algorithm
2012-08-17 22:48:02 -04:00
Stefan van der Walt
90e61e22ae
Merge pull request #240 from tonysyu/rename-duplicates
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BUG: Rename modules with duplicate function names.
2012-08-16 23:01:48 -07:00
Tony S Yu
1ea41173b8
BUG: Rename files with similar function, python module, and cython extension names.
2012-08-16 22:42:27 -04:00
Johannes Schönberger
6ead3097c2
cast input of image label function
2012-08-10 09:10:06 +02:00
Tony S Yu
9cea60d817
STY: minor PEP8 change
2012-08-09 09:49:22 -04:00
Tony S Yu
e4dd658daf
STY: PEP8 and other clean up.
2012-08-09 00:23:58 -04:00
Tony S Yu
70153abb83
BUG: fix import of Cython extension.
2012-08-09 00:15:42 -04:00