Olivia
9bfbcfcef3
Removed extraneous print statement
2015-08-30 23:15:04 +01:00
Olivia
9ea085fd6f
Added new functionality to remove small holes from images.
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This is currently working with **kwargs except for inplace
which I cannot get working. It works with arrays of type int
but returns an array of type bool. Possibly in future add
labelling for arrays of type int. A UserWarning is produced
when using arrays of type int which seems to work normally
but the test created for this does not pick up the warning.
Any assistance on these issues would be helpful. I started
this at EuroScipy 2015 and this fixes issue #1642
2015-08-30 23:05:15 +01:00
Emmanuelle Gouillart
01f5fc4e72
Merge pull request #1663 from juliusbierk/hough-circle-example
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Example for hough_circle
2015-08-30 11:29:27 +02:00
Emmanuelle Gouillart
fa9e000ae4
Merge pull request #1631 from stefanv/rename_denoise_nl_means
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Rename denoise nl means
2015-08-29 17:33:05 +02:00
Emmanuelle Gouillart
05729acb7d
Merge pull request #1660 from jwiggins/issue-1586
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Raise an error for negative sigma values in guassian_filter.
2015-08-29 15:59:12 +02:00
Julius Bier Kirekgaard
b5fd7bc885
Fixed forgotten output for docstring example
2015-08-28 21:09:42 +01:00
Julius Bier Kirekgaard
002fc70759
Shorter hough_circle example
2015-08-28 21:04:52 +01:00
Julius Bier Kirekgaard
3c41e75b22
Added whitespace to comply with pep8
2015-08-28 20:46:14 +01:00
John Wiggins
6e6d243dbd
Use assert_raises instead of @raises.
2015-08-28 21:19:20 +02:00
John Wiggins
a0fc75c7cb
Don't use two lines to raise an exception with a short message.
2015-08-28 21:10:39 +02:00
Julius Bier Kirekgaard
5f5af64551
Example for hough_circle
2015-08-28 20:08:11 +01:00
John Wiggins
c05108da36
Replace a doc test with some regular unit tests.
2015-08-28 21:03:01 +02:00
Arnaud De Bruecker
50804d1e9b
Correct documentation to denoise_bilateral for sigma_range
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Closes #1630
2015-08-28 19:43:14 +01:00
John Wiggins
ff4e3bd0bd
Raise an error for negative sigma values in guassian_filter.
2015-08-28 20:37:26 +02:00
Arnaud De Bruecker
955b1761f1
Add documantation to denoise_bilateral for sigma_range
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closes #1630
2015-08-28 19:10:09 +01:00
Stefan van der Walt
e084c5fd50
Rename nl_means_denoising to denoise_nl_means
2015-08-27 13:19:02 -07:00
Stefan van der Walt
9fa408a0f6
Add utility to rename functions
2015-08-27 13:19:01 -07:00
Stefan van der Walt
8cb409bcb0
Add alpha layer support to gray2rgb
2015-08-21 15:36:23 -07:00
Johannes Schönberger
ec64872fd5
Some doc string fixes for recently merged code
2015-08-20 19:08:54 -04:00
Johannes Schönberger
236aa208fe
Merge pull request #1583 from grlee77/fix_interp_modes
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FIX: bug in 'reflect' and 'wrap' coordinate mapping
2015-08-20 18:53:11 -04:00
Johannes Schönberger
d4641a436a
Improve documentation of moments functions
2015-08-19 14:11:39 -04:00
Gregory R. Lee
49b4f69ac0
MAINT: remove unused import
2015-08-18 12:22:10 -04:00
Gregory R. Lee
1303317512
BUG: fix one additional location where ndimage mode conversion was needed
2015-08-14 09:38:02 -04:00
Gregory R. Lee
c7a82f8ceb
MAINT: minor spacing issues and typos fixed
2015-08-13 23:39:56 -04:00
Gregory R. Lee
81ea7a6e34
MAINT: All modes in _shared.interpolation.pxd were changed to be consistent with numpy.pad naming conventions. Specifically 'nearest' was changed to 'edge' and 'mirror' was changed to 'reflect'. All functions with a mode argument that rely on these functions had their inputs changed accordingly. For now there is a deprecation warning if the user supplies mode 'nearest'. Mode 'mirror' never appeared in an official release of skimage and so has no corresponding deprecation warning.
2015-08-13 23:39:55 -04:00
Gregory R. Lee
8e3b6bc9da
MAINT: convert additional numpy.pad mode names to their dask.array equivalents
2015-08-13 23:39:55 -04:00
Gregory R. Lee
cef22e4234
MAINT: PEP8 fixes and _interpolation_test.pyx -> interpolation.pyx rename
2015-08-13 23:39:55 -04:00
Gregory R. Lee
48622ca179
TST: add test for resizing 2D image with a 3D output shape
2015-08-13 23:39:54 -04:00
Gregory R. Lee
9e9c65b97c
ENH: add mode 'mirror' to interpolation.pxd and dependent functions
2015-08-13 23:39:54 -04:00
Gregory R. Lee
3ae1e3138a
BUG: bugfix for resize: upgrade image to 3d if necessary
2015-08-13 23:39:54 -04:00
Gregory R. Lee
c5a735420f
DOC: add visual example of edge modes
2015-08-13 23:39:53 -04:00
Gregory R. Lee
a36ab880fc
TST: add tests for coord_map function
2015-08-13 23:39:53 -04:00
Gregory R. Lee
7cfbd70204
BUG: fix bugs in coord_map for modes wrap and reflect
2015-08-13 23:39:53 -04:00
Josh Warner
cbc851bba6
FIX/STY: Remove magic and enforce PEP8 in plugins.
2015-08-13 19:47:00 -05:00
Josh Warner (Mac)
b35215ec6b
TSTFIX: Missing assert statement and PEP8
2015-08-01 00:28:35 -05:00
Jonathan Helmus
70d1afe153
DOC: Simplified the message when a broken skimage build detected
2015-07-30 14:53:49 -05:00
Jonathan Helmus
00a841f1c2
MAINT: Refactored imports
2015-07-28 14:11:51 -05:00
Jonathan Helmus
f10ae88139
MAINT: remove unchecked import from util.dtype
2015-07-28 14:06:03 -05:00
Jonathan Helmus
d2519d610f
ENH: Build check in skimage/__init__.py module
2015-07-28 14:00:32 -05:00
Jonathan Helmus
9727711405
Removed __check_build directory
2015-07-28 13:43:48 -05:00
Jonathan Helmus
93366d1b57
MAINT: Fixed __check_build setup.py file
2015-07-28 13:16:09 -05:00
Jonathan Helmus
64c4252eab
BLD: __SKIMAGE_SETUP__ global variable for detecting build
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The __SKIMAGE_SETUP__ global variable is set to True if skimage is being build
from the main setup.py file, False if not. This behavior is modeled after a
similar setup in scikit-learn
2015-07-28 13:16:09 -05:00
michaelpacer and Jonathan Helmus
edc16c6b75
Added build location checker, does not fully work yet. Complicated error.
2015-07-28 13:14:41 -05:00
Juan Nunez-Iglesias
c2f8c4ab12
Merge pull request #1599 from blink1073/viridis
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Add the viridis colormap and use it for non-standard images
2015-07-22 12:54:07 +10:00
Steven Silvester
5632c9c1a9
Only add colorbar if the cmap is not the default
2015-07-16 21:39:05 -05:00
Steven Silvester
9fb7676c92
Fix relative import
2015-07-16 21:28:37 -05:00
Steven Silvester
eaaea690f2
Allow viridis to be used by name
2015-07-16 07:58:14 -05:00
Steven Silvester
3d963649fc
Use a less-invasive approach
2015-07-16 07:56:14 -05:00
Steven Silvester
3d044af4da
Be more explicit about configparser import
2015-07-15 21:22:41 -05:00
Josh Warner
24b3a81dd9
Merge pull request #1604 from blink1073/pil-close
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FIX: Do not let PIL manage the file handle.
2015-07-14 21:47:32 -05:00
Olivia