Commit Graph

593 Commits

Author SHA1 Message Date
Johannes Schönberger a489b85b22 Do not acquire GIL for corner detectors 2015-05-20 07:45:04 -07:00
Johannes Schönberger c52c7f4bfb Do not acquire GIL for ORB 2015-05-20 07:38:47 -07:00
Daniel Wennberg d5099db362 Fix PEP8 2015-05-03 01:32:56 +02:00
Daniel Wennberg b80e494484 Change data types to conform to style guide 2015-05-02 18:12:30 +02:00
Daniel Wennberg dc0a91b569 Fix doctests for #1257
Changing the return type of the blob functions from integer to float
arrays invalidated the docstring examples. Updating the examples fixes
the doctests.
2015-05-02 18:12:30 +02:00
Daniel Wennberg c86c6effe8 Fix tests for #1257
The test of blob_doh() set an unrealistically strict threshold for the
accuracy of the estimated blob radius, causing the test to fail with the
true floating-point value (previously, the test passed only because
sigma was truncated to integer). Increasing the threshold fixes the
problem.
2015-05-02 18:12:30 +02:00
Eric 833edc17ef Fixed typo 2015-05-02 18:12:30 +02:00
Eric eb6ddc735b Changed local_maxima to float32 2015-05-02 18:12:30 +02:00
Eric 43246e30af Blob detection supports for non-integer sigmas 2015-05-02 18:12:30 +02:00
Stefan van der Walt d6870c6de7 Merge pull request #1066 from msarahan/PhaseCorrelation
Add subpixel shift registration
2015-03-02 08:30:45 -08:00
Johannes Schönberger 84bcb583d7 Fix Hessian matrix eigvals 2015-02-23 22:32:04 -05:00
Michael Sarahan 71a89697f0 improve test coverage. Use SciPy's fourier_shift for examples. 2015-02-21 11:33:37 -08:00
Michael Sarahan cf09b0c5ef Incorporate fixes for complex images 2015-02-20 20:55:46 -08:00
Steven Silvester ed7aecdc4c Fix links 2015-02-07 19:33:30 -06:00
Steven Silvester be7154f23d Skip build on 3.2
Skip doc build on 3.2

Skip doc build on 3.2

Use block literal

Fix html make target

Revert change to threshold_isodata

Fix skimage.novice and thresholding warnings

Fix feature.__init__ __all__

Fix generic.py link

Doc reference fixes

Fix missing class member warnings

Add parallelization to the user guide toc

Remove unused automodule directives

Fix sub_dirs in gallery_index

Remove unused file and fix reference to api/api

Add missing links to user guide

Use pre-output links to images

Recover from Juan's doc 'upgrades'
2015-02-07 16:40:37 -06:00
Michael Sarahan 03dc489457 Add subpixel-precision image translation registration function to feature module 2015-01-29 20:09:50 -08:00
Steven Silvester b6a1bcdb06 Merge pull request #1324 from ahojnnes/rel-import
Use relative imports in skimage files
2015-01-25 15:26:34 -06:00
kpk09 305f5fd225 Using numpy.argwhere makes code easier to read 2015-01-25 00:22:11 +00:00
kpk09 c5ac705123 Fixed bug in feature.peak_local_max: num_peaks should now be usable for ND arrays. 2015-01-25 00:19:12 +00:00
kpk09 22ffc20fc4 Added broken test for feature.peak_local_max when the image is 3D and num_peaks is set. The current code only holds for 2D images. 2015-01-25 00:15:20 +00:00
Johannes Schönberger ee5c6fbeb2 Use relative imports in skimage files 2015-01-22 07:36:48 -05:00
Steven Silvester f898bd0209 Style fixes 2014-12-26 11:26:30 -06:00
Steven Silvester c0a0490eed Fix handling of multiple warnings and update tests
Fix handling of multiple warnings

Update all test __init__ files

Update segmentation pkg

Update the color pkg

Update the exposure pkg

Update the filters pkg

Update the io pkg

Update the measure pkg

Update morphology package

Restructure test setup function

Add expected_warnings to __all__

Update restoration pkg.

Remove explicit filter check since it is done elsewhere

Fix the image test helpers

Update the transform pkg

Fix util pkg

Update viewer pkg
2014-12-23 16:51:06 -06:00
Steven Silvester 4680f30466 Add a test setup helper function
Add a function to set up a skimage test

Switch to new test helper function

Import local packages that raise warnings in test setup function

More fixes to doctests

Fix regionprops doc test

Try and fix the test_rank failure.

Remove no longer needed RectangleSelector shim

Skip more doctests in _regionprops

Try importing another scipy subpackage
2014-12-23 16:49:20 -06:00
Steven Silvester f72882fbd2 Import scipy before turning on warnings 2014-12-23 16:49:19 -06:00
Steven Silvester 9e8f91930e Handle warnings in several packages
Start handling warnings in data, exposure, and draw

Add a known_warning decorator and suppress warnings in color pkg

Use the existing all_warnings context manager

Raise warnings in data

Raise warnings in draw

Raise warnings in exposure

Suppress warnings in exposure tests

Add comments about warning suppressions

Raise warnings in feature

Fix warnings in filter package

Add warning handling to graph

Handle warnings in io package
2014-12-23 16:47:41 -06:00
Johannes Schönberger 20d81529f4 Fix matching test cases 2014-12-23 12:40:15 +01:00
Johannes Schönberger a1a2f9c988 Remove __init__.py from tests folder, remove unnecessary load of test image 2014-12-22 20:39:18 +01:00
Pratap Vardhan b72a960670 DOC: Misc spell corrections 2014-12-16 11:41:24 +05:30
Johannes Schönberger 3a1079a180 Misc PEP8 fixes 2014-12-14 02:56:14 +01:00
emmanuelle 873a2bab4f Modified a few docstrings that made doctesting fail 2014-12-07 16:58:36 +01:00
Vighnesh Birodkar 9a8c7e5325 fixed blob area overlap function warning 2014-11-26 23:10:49 +05:30
Stefan van der Walt 78a7b7307a Rename and deprecate filter module to prevent shadowing of built-in keyword 2014-11-10 12:53:50 +02:00
Stefan van der Walt 3172198244 Remove prints in test suite 2014-11-07 18:05:42 +02:00
Rebecca 5de38f290c Modified docstring 2014-11-07 16:04:53 +02:00
Rebecca 2ba41844ff modified array 2014-11-07 16:04:53 +02:00
Rebecca 1b217f971e replacing lena in examples and most tests 2014-11-07 16:01:23 +02:00
Steven Silvester 2db19c624d Add ndim argument in utility method 2014-09-21 06:10:40 -05:00
Steven Silvester ded8fa30b9 Catch a few more asserts 2014-09-21 05:54:13 -05:00
Steven Silvester 2a057f7246 Make ndim explicit arg for clarity and update docstring 2014-09-21 05:48:58 -05:00
Steven Silvester bcac1b1a6d Fix canny test to reflect new error type. 2014-09-20 20:09:44 -05:00
Steven Silvester 04f91021a9 Fix assert_nD call in template.py 2014-09-20 20:09:26 -05:00
Steven Silvester 6a05edb9ea Fix syntax error and weiner check 2014-09-20 19:50:37 -05:00
Steven Silvester 028fe11515 Use assert_nD in template.py 2014-09-20 17:13:57 -05:00
Steven Silvester 6a8c5e460f Implement assert_nD in filter and feature packages 2014-09-20 17:04:11 -05:00
SemiColon Warrier 0eeebea22c updated local_binary_pattern documentation
The reference link was divided into two lines thereby linking to only half the url
2014-09-16 16:31:39 +02:00
Julian Taylor 87c72ae60f BUG: add signed flag to chars
Sign of char is undefined and there are numerous places where its sign
is important. Fixes tests with -funsigned-char.
Closes gh-1110
2014-09-05 23:51:39 +02:00
Julien Coste 23a6f0af6c remove auto added __author__ in __init__.py file 2014-08-31 11:00:16 +01:00
Julien Coste 8a337dbe46 Move canny from filter to feature 2014-08-31 10:55:12 +01:00
Pablo Márquez Neila 64e20d8173 Minor fix 2014-08-18 02:47:29 +02:00