a5f6db59cb
doc example
2016-01-06 15:42:10 -05:00
422dfc6c22
cleanup
2016-01-06 15:17:48 -05:00
e8f2805d64
changed to eosion/dilation logic
2016-01-06 15:07:35 -05:00
a95c0bdddc
passing selem argument
2016-01-06 15:07:35 -05:00
4c05e65670
changed logic to use erosion/dilation
2016-01-06 15:07:35 -05:00
caba3041d1
indentation correction
2016-01-06 15:06:18 -05:00
1769cdddcf
added boundary rag construction
2016-01-06 15:06:18 -05:00
8f2839e1b3
Merge pull request #1747 from JGoutin/OptimizeLevel2Compilation-patch
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Import fail if python is running with -OO
2015-12-30 23:14:03 +01:00
33a2182e06
Merge pull request #1705 from deledalle/ref_nlmeans
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DOC : add ref to nlmeans
2015-12-30 22:06:19 +01:00
732df5fc55
Merge pull request #1850 from jwiggins/fix/potential-bilateral-leak
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FIX: Move a argument check to avoid leaking malloc'd arrays.
2015-12-30 21:43:18 +01:00
6c9325aadf
Minor fixes: errant indent, functools.wraps and python3 style
2015-12-28 21:13:22 +01:00
72f542100e
Use np.empty() instead of malloc/free in _denoise_bilateral.
2015-12-27 23:29:59 -06:00
e528d47d5b
FIX: Move a argument check to avoid leaking malloc'd arrays.
2015-12-26 10:55:28 -06:00
fab4265f47
Removed @property decorator, that made _install_properties_doc crash
2015-12-25 12:37:41 +01:00
add3352284
Euler number is only2d
2015-12-25 11:38:23 +01:00
9317b7be34
Make area a cached property; use np.sum
2015-12-24 19:02:15 +01:00
d8cc148d8c
Replace individual errors by 2D decorator
2015-12-24 19:00:43 +01:00
0359284623
Modified some methods in _RegionProperties class to make them
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dimension-agnostic. Removed the NotImplementedError for 3-D images in
regionprops function.
2015-12-24 18:56:49 +01:00
e1751f91e2
Some PEP8 in test module
2015-12-24 18:52:57 +01:00
d4b3aeeed3
Merge pull request #1846 from arokem/hull-docs
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DOC: Small one. The input to this one needs to be 2D.
2015-12-24 10:34:00 +01:00
6740ef9849
Merge pull request #1842 from jni/1840
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Specify 2D images in denoise bilateral docstring
2015-12-24 09:59:11 +01:00
9fb5f1333d
TST: Test both functions(!).
2015-12-23 15:36:35 -08:00
cc8c3b7687
Merge pull request #1847 from emmanuelle/remove_label_from_morphology
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Remove deprecated label function from morphology module in preparation for 0.12 release
2015-12-23 15:01:46 -08:00
436d0e8ca3
TST: Test error handling in convex_hull, convex_hull_object.
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Also, a few PEP8 fixes in both module and tests.
2015-12-23 14:57:44 -08:00
227211fec7
DOC: Small one. The input to this one needs to be 2D.
2015-12-23 14:24:52 -08:00
0b61b8f46f
Removed deprecated label function from morphology module in preparation
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for 0.12 release.
2015-12-23 23:24:22 +01:00
4509338aac
Merge pull request #1777 from stevendbrown/rp_intensity_check
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Added label vs. intensity shape checking to regionprops
2015-12-23 22:34:59 +01:00
c5f9fffaad
Merge pull request #1844 from emmanuelle/fix_euler
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Fix euler
2015-12-23 21:56:46 +01:00
3f5aa73eb4
Update tests to also use reasonable weights for TV denoising
2015-12-23 12:30:12 -05:00
f143f4b39e
Change default weight for denoise_tv_chambolle to a value that is reasonable for float images scaled to the [0, 1] range
2015-12-23 12:29:37 -05:00
d62524f103
Mentioned Euler characteristic (instead of Euler number) in docstring of
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regionprops.
2015-12-23 16:26:23 +01:00
a56c6071c2
Corrected bug in the computation of the Euler characteristic.
2015-12-23 16:09:13 +01:00
d6105a0fe4
Merge pull request #1782 from pratapvardhan/clncython
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BUG: Buffer dtype mismatch, expected 'Py_ssize_t' but got 'long'
2015-12-23 15:35:05 +01:00
e102011098
Specify 2D images in denoise bilateral docstring
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Addresses #1840
2015-12-23 23:57:22 +11:00
ea9ed9ccd9
Merge pull request #1826 from jni/rag-generic
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Allow construction of simple RAGs from label images
2015-12-22 17:37:02 +01:00
a4d0ac85cc
Merge pull request #1603 from michaelpacer/draw_coords
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Fixed variable names to accord with r, c naming convention
2015-12-21 12:11:16 -06:00
f0eec46e5c
Merge pull request #1783 from ivoflipse/fix_hog
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Fixing Cythonized version of HOG
2015-12-19 17:37:24 +01:00
14095de291
Merge pull request #1830 from scottsievert/fftconvolve
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Clean up richardson-lucy deconvolution function
2015-12-16 14:42:24 +11:00
fb99e3cce6
styles code (no more functions, less lines)
2015-12-15 19:19:14 -06:00
06186710d5
Update outdated docstring of _add_edge_filter
2015-12-16 08:31:30 +11:00
6b908c1bb1
BUG: io: imread in the PIL plugin drops indexed PNG alpha channel.
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When using the PIL plugin to read an indexed PNG file that has
an alpha channel, the alpha channel would be lost.
2015-12-15 12:30:43 -05:00
74a015d1d4
radon transform: when circle=True, ignore values outside circle without throwing an error ( closes #1808 )
2015-12-14 17:13:29 -08:00
5c03f2aff5
Bug: not all edges found by asymmetric footprint
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If we have a label image:
[[1, 2],
[3, 4]]
Then the footprint:
[[0, 0, 0],
[0, 1, 1],
[0, 1, 1]]
will not discover the edge (2, 3), even though that edge should be
present when `connectivity=2`.
This commit fixes the bug by using a complete footprint, without the
top/left surfaces zeroed out.
See also:
https://github.com/scikit-image/scikit-image/pull/1826#issuecomment-164597442
2015-12-15 10:56:04 +11:00
4aa08fe353
Simplify cache
2015-12-14 00:42:29 -08:00
bf5ba4540b
Fix doc setting for Python 2.x
2015-12-14 00:42:29 -08:00
024dd34b19
Clean up style and PEP8
2015-12-14 00:42:29 -08:00
5e848f5889
Auto-generate _RegionProps property docstrings
2015-12-14 00:42:29 -08:00
4deeb1f802
Move max_id logic to top of RAG constructor
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max_id is used during RAG building iteration, resulting in an error if
it is not defined ahead of the generic_filter stage.
2015-12-14 19:06:43 +11:00
53d3154f09
Use a strided 1-element array as dummy filter out
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When using generic_filter to build a graph, the numerical filter
output is actually ignored. Building a full array, even of the
smallest dtype, was wasteful. Using stride_tricks solves this by
creating a single-element buffer into which all output is fed.
2015-12-14 18:57:29 +11:00
49aa7cf999
Fix typo in variable name
2015-12-14 18:42:25 +11:00
Vighnesh Birodkar