Commit Graph

44 Commits

Author SHA1 Message Date
Christoph Gohlke 3d3351b9fa Fix failing test 2015-05-07 17:34:05 -07:00
Christoph Gohlke 3c8bf02fa5 Fix skimage.io.imread returns incorrect dimensions
Fixes #1496
2015-05-07 15:03:25 -07:00
emmanuelle b66fa13dfe Removed obsolete Image class from io submodule. 2015-05-01 20:51:12 +02:00
Steven Silvester 0e61374a89 Add a helper function to check for low contrast
Add a helper function to check for low contrast

Add a check for low contrast when using imsave

Use the low contrast helper in imshow and make sure warnings are always shown

Clean up parameter names and add doctests

Remove unnecessary warning context

Remove unnecessary warning context

Add dtype ranges for 64bit types

Update tests with new warnings

Fix doctest logic

Fix doctest logic

Add a low contrast test with multiple dtypes

Fix check for color images

Fix color check again

Add support for int32 types

Relax assertion for 32bit builds

Add a low contrast test with multiple dtypes

Add a low contrast test with multiple dtypes

Fix check for color images

Fix color check again

Add support for int32 types
2015-03-09 21:34:58 -05:00
Johannes Schönberger ee5c6fbeb2 Use relative imports in skimage files 2015-01-22 07:36:48 -05:00
Juan Nunez-Iglesias 984e22b47a Replace Axes with AxesImage where relevant 2015-01-14 20:13:32 +11:00
Juan Nunez-Iglesias fac8fde9dc Overhaul matplotlib imshow plugin
- images are displayed within their native dtype range,
- unless they are outside of their range (e.g. a float image with
  values greater than 1) or they are of an unsupported dtype (e.g.
  a uint64 image), in which case the dynamic range of the display
  corresponds to the image range,
- which is also done for images with extremely low contrast for their
  native range (e.g. float images in [1e-7, 5e-7].

In the latter two cases, a colorbar is also displayed and a warning is
raised.

Finally, we return the axes object on which the image is plotted, to
enable further plotting in the matplotlib new OO style.
2015-01-14 20:13:32 +11:00
blink1073 5677dafe41 Move away from random.random in favor of random.rand 2014-07-19 18:18:23 -05:00
Tony S Yu 6a751045f1 Un-revert commits added to test Travis CI failures 2013-12-07 01:04:40 -06:00
Tony S Yu c09f1bfd32 Revert previous 3 commits to test Travis CI failures. 2013-12-07 00:01:32 -06:00
Tony S Yu 0f88bed41d Remove inherited config and file-type-specific code.
This functionality needs to fleshed out a bit more. This commit can be
reverted after the initial refactor PR.
2013-12-06 22:40:25 -06:00
Tony S Yu e59daf474c Modest attempt at normalizing file extensions 2013-12-05 23:38:13 -06:00
Tony S Yu 99aa5a8238 Move io._plugins.plugin to io.manage_plugins 2013-12-05 23:19:47 -06:00
Tony S Yu 860c6b5cb5 Use InheritedConfig for plugin_store 2013-12-05 23:19:46 -06:00
Tony S Yu 86abc7c970 Factor out url handling for unified file/url behavior 2013-12-05 23:19:45 -06:00
Tony S Yu 312151b481 Move __init__ functions to submodules.
And rename functions so we don't have to alias imports.
2013-12-05 23:19:44 -06:00
Tony S Yu b8c30bad46 Move image stack to its own module 2013-12-05 23:19:43 -06:00
Johannes Schönberger 3b1182cc2f Skip show commands for doc tests 2013-11-12 08:30:12 +01:00
Stefan van der Walt eb6867cfe2 Make six an external dependency. 2013-10-27 14:06:26 +02:00
Stefan van der Walt 2b0f037422 Remove Image wrapper from io. Improve tags handling. 2013-08-21 17:46:38 +02:00
Stefan van der Walt a1adfa8d54 Correctly check for string type. 2013-06-29 10:17:41 -05:00
François Boulogne 5908542421 fix import urllib2 for python3 2013-06-13 13:26:33 +02:00
Tony S Yu 8e0bf8ab8f Fix imread from urls on some backends.
Some backends infer the image type from the extension. This fix just adds the extension to the temp filename.
2013-04-20 14:57:58 -05:00
Tony S Yu a6d4b6e7fa BUG: Fix file separators for windows 2012-12-12 11:06:15 -05:00
Tony S Yu c451aa0d4b STY: Fix confusing use of context-manager. 2012-10-19 17:52:10 -04:00
Tony S Yu 9f7a376e4d ENH: Add test and support for reading file URLs 2012-10-19 15:21:31 -04:00
Tony S Yu e513018052 Fix handling of temporary file.
Opening an already-opened file was unsafe. Close the file, then manually delete it.
2012-10-18 22:07:18 -04:00
Tony S Yu cd8c3da8ec ENH: Allow imread to read URLs 2012-10-18 21:51:21 -04:00
cgohlke cba654cbda Use io.BytesIO instead of StringIO
Fixes NameError: global name 'io' is not defined on Python 3
2012-09-29 17:00:59 -07:00
Tony S Yu bfa6f05e1f DOC: Change title to match numpy docstring standard 2012-09-02 17:53:22 -04:00
Stefan van der Walt 8cdd0e909a Merge pull request #258 from tonysyu/imshow-filename
ENH: Allow imshow to show images when given file name.
2012-08-24 02:56:45 -07:00
Tony S Yu de20e482ad ENH: Allow imshow to show images when given file name. 2012-08-22 22:10:32 -04:00
wilsaj 38a96b9ac9 Remove tag metadata-related fucntions from Image class 2012-08-21 20:51:23 -05:00
wilsaj 9bd445700a add note about to display protocol to Image docstring 2012-08-12 18:20:58 -05:00
wilsaj 2b66f0c303 role duplicate logic for Image._repr_png_() and Image._repr_jpeg_() into a common method 2012-07-24 23:21:42 -05:00
wilsaj b9d468b668 use standard conventions for Image.__new__() cls attribute and docstring 2012-07-24 23:20:22 -05:00
wilsaj 7368332df9 remove unused import 2012-07-24 23:07:44 -05:00
wilsaj fbb2ec3afa close temp StringIO buffers when we're done with them 2012-07-20 20:34:12 -05:00
wilsaj 32d3e1b161 use repr_png and repr_jpeg hooks rather than repr_html
these will work in the ipython qtconsole as well!
2012-07-20 16:44:05 -05:00
wilsaj 70cf6cfba0 fix test so it looks for new Image class 2012-07-20 15:39:50 -05:00
wilsaj d2e0484845 add html repr method for Image class 2012-07-20 15:19:22 -05:00
wilsaj f676152448 add stefan's image class 2012-07-20 15:18:09 -05:00
Andreas Mueller f7b3d8062c COSMIT pep8 2012-06-29 11:27:23 +02:00
Stefan van der Walt 09021dbd83 PKG: Move io to _io (closes #39). 2011-10-27 16:08:21 -07:00