e084c5fd50
Rename nl_means_denoising to denoise_nl_means
2015-08-27 13:19:02 -07:00
83d5ff9001
Consistently use relative imports
2015-07-11 15:41:37 -05:00
0d134987f9
Harmonize all ndimage usage across the library
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Only two forms remain in use:
- `from scipy import ndimage as ndi`
- `from scipy.ndimage import function`
2015-06-09 15:18:37 +10:00
0c69cdc5e7
Fix out-of-bounds access in color LUT for NaN values
2015-05-10 13:47:42 -04:00
4644bdd347
Merge pull request #874 from emmanuelle/nlm_denoise
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FEAT: NL-means denoising
2015-02-19 16:53:58 -06:00
4697d66c85
[ENH] Removed eps parameter that was not needed.
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Added a test for the case when no denoising at all is performed when h is
very small.
Corrected a bug in looping range in the classical algorithm.
2015-01-26 22:06:38 +01:00
2e0b37b11d
Changed variable names for coordinates for better consistency with
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skimage conventions. Moved some code to inline functions to improve
clarity.
2015-01-25 19:21:23 +01:00
8eebb17bac
No SegFault when unwrapping a 3D fully masked array
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The unwrap_phase function no longer causes a Segmentation fault when passed
a 3D array in which all elements are masked.
Closes #1347
2015-01-21 16:45:23 -06:00
d3024b5c73
No SegFault when unwrapping a 2D fully masked array
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The unwrap_phase function no longer causes a Segmentation fault when passed
a 2D array in which all elements are masked.
2015-01-21 16:36:58 -06:00
de01ea56ae
unwrap_phase returns masked array when image is masked
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With commit e3b84ed
2015-01-21 16:23:50 -06:00
eef3734bfe
Remove end of line whitespace in test_unwrap.py
2015-01-21 16:03:18 -06:00
8ebe073ad5
BUG: unwrap_phase on compressed masked array
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unwrap_phase works on masked arrays with a compressed mask (no elements masked)
Closes #1346
2015-01-21 16:01:13 -06:00
60d0c81aed
Changed type of error returned for image dimension strictly greater than 3.
2015-01-20 22:11:24 +01:00
dd9030d44c
Implemented fast algorithm also for 3-D and 2D-RGB images. Changed API so
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that there is only one function for fast and classic algorithms.
2015-01-18 22:18:29 +01:00
ecaa959195
Implemented asymmetric distance computation to save speed factor of 2
2015-01-10 16:40:43 +01:00
f898bd0209
Style fixes
2014-12-26 11:26:30 -06:00
c0a0490eed
Fix handling of multiple warnings and update tests
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Fix handling of multiple warnings
Update all test __init__ files
Update segmentation pkg
Update the color pkg
Update the exposure pkg
Update the filters pkg
Update the io pkg
Update the measure pkg
Update morphology package
Restructure test setup function
Add expected_warnings to __all__
Update restoration pkg.
Remove explicit filter check since it is done elsewhere
Fix the image test helpers
Update the transform pkg
Fix util pkg
Update viewer pkg
2014-12-23 16:51:06 -06:00
4680f30466
Add a test setup helper function
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Add a function to set up a skimage test
Switch to new test helper function
Import local packages that raise warnings in test setup function
More fixes to doctests
Fix regionprops doc test
Try and fix the test_rank failure.
Remove no longer needed RectangleSelector shim
Skip more doctests in _regionprops
Try importing another scipy subpackage
2014-12-23 16:49:20 -06:00
f72882fbd2
Import scipy before turning on warnings
2014-12-23 16:49:19 -06:00
0debedd82c
Handle more warnings and reset io plugins as needed
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Reset plugins prior to running collections test
Handle warnings in morphology pkg
Add __init__ for morpohology tests
Handle warnings for novice pkg
Handle warnings for restoration pkg
Handle warnings for segmentation pkg
Handle warnings for _shared pkg
Handle warnings for transform pkg
Handle warnings for util pkg
Handle warnings in viewer module
2014-12-23 16:48:16 -06:00
03be934e6d
Set seed for test cases
2014-12-16 16:38:01 +01:00
4004f048ef
Faster version of non-local means denoising for 2D greyscale images
2014-12-07 12:02:05 +01:00
2e91b0db95
Moved non-local means denoising to restoration submodule
2014-12-06 13:16:40 +01:00
034a7adab3
Use equal_nulp for more robust test comparison
2014-11-07 16:04:54 +02:00
1b217f971e
replacing lena in examples and most tests
2014-11-07 16:01:23 +02:00
8bba07a7f2
Merge pull request #1171 from jjhelmus/unwrap_phase_3d_bug
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BUG: segmentation fault when unwrapping 3d image
2014-11-07 13:39:18 +02:00
25653dc288
TST: Unit test to check for 3d unwrap seg fault
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Added a unit test to check for bug in unwrap_phase which causes
a segmentation fault when the middle dimension is connected.
2014-11-06 21:03:14 -06:00
d50afed18e
Add test for preserving image shape in deconv
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I can confirm that this test does not pass in the current master.
2014-09-26 19:13:33 +10:00
214613c2a8
Run restoration test suite when run as main
2014-09-26 19:13:33 +10:00
3b3bb01270
Fix denoise tests
2014-08-08 08:27:57 -04:00
5677dafe41
Move away from random.random in favor of random.rand
2014-07-19 18:18:23 -05:00
e8ab5559d5
Test invalid input for unwrap_phase
2014-05-10 10:47:52 -04:00
ef63523ab0
Move denoise functions to restoration submodule
2014-03-13 19:39:54 -04:00
107f1d607c
Move phase unwrapping algorithms to restoration submodule
2014-03-13 18:50:39 -04:00
e0bb826e9e
Update test file because of the new clip param default to True
2013-12-10 23:30:46 +01:00
15a96d5300
Fix python3 test and real values image.
2013-12-10 22:45:16 +01:00
bda9b4fb3c
Fix travis test
2013-12-10 22:45:16 +01:00
b0b0b112db
Add tests, coverage improvement.
2013-12-10 22:45:16 +01:00
4e2a5a9644
Better docstring. Better test coverage.
2013-12-10 22:45:16 +01:00
a3b360f84a
Fix test_restoration.py rename.
2013-12-10 22:45:14 +01:00
def48f1909
Rename deconvolution to restoration
2013-12-10 22:45:14 +01:00
Stefan van der Walt