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4640 Commits
Author SHA1 Message Date
Blake Griffith 0e573f71af Use absolute import 2015-05-19 17:14:27 -05:00
Blake Griffith a258fc7b3b Rename apply and apply_chunks to apply_parallel 2015-05-19 17:05:49 -05:00
arve0andBlake Griffith 7ac7e1078b cpu_count may raise NotImplementedError 2015-05-19 17:05:49 -05:00
Blake Griffith ae73d03f5f process -> apply, more docs 2015-05-19 17:05:49 -05:00
Blake Griffith 08dcf4a4e6 Move the function's args and kws to the end of the signature 
renamed them to extra_arguments and extra_keywords

suggested by @jni
 2015-05-19 17:05:49 -05:00
Blake Griffith 6be2b1bfa2 Smarter chunk selection. 2015-05-19 17:05:49 -05:00
Blake Griffith 4a47127871 pep8 2015-05-19 17:05:48 -05:00
Blake Griffith 72091a8818 Tests for process chunks function. 2015-05-19 17:05:48 -05:00
Blake Griffith 43bd8242ff load process chunks into namespace 2015-05-19 17:05:48 -05:00
Blake Griffith 42e62e7a0b Add process_chunks function 2015-05-19 17:05:48 -05:00
Gregory R. Lee ce8e88d6e2 remove truncate argument from gaussian_filter for scipy<0.14 compatibility 2015-05-19 11:16:19 -04:00
Gregory R. Lee c7916ffe9a remove image_similarity; set 11-tap Gaussian via truncate=3.5; add links to references 2015-05-15 21:35:47 -04:00
Gregory R. Lee 6317aac01e use scipy.ndimage.gaussian_filter instead of a custom implementation 2015-05-15 16:03:00 -04:00
Gregory R. Lee 9090aa6afb remove multichannel magic and default to False. fix bugs in tests introduced during rebase 2015-05-15 14:28:48 -04:00
Gregory R. Lee d781fc5774 docstring fixes 2015-05-15 14:09:03 -04:00
Gregory R. Lee 9cb4b4bae6 revise argument handling code for multichannel case 2015-05-15 13:47:20 -04:00
Gregory R. Lee 86e07447d1 replace _discard_edges with skimage.util.arraypad.crop 2015-05-15 13:47:16 -04:00
Gregory R. Lee 3bf6cc106e add additional tests 2015-05-15 13:47:13 -04:00
Gregory R. Lee 6294dcbf12 allow remaining hardcoded constants (sigma, K1, K2) to be modified via kwargs 2015-05-15 13:45:40 -04:00
Gregory R. Lee 6ba1596174 sample vs. population covariance difference addressed to more accurately match reference implementations 2015-05-15 13:45:38 -04:00
Gregory R. Lee 3b27107bfb structural_similarity: add image_content_weighting option 2015-05-15 13:42:29 -04:00
Gregory R. Lee b193e7990e structural_similarity: add option to return full ssim image in addition to the mean 2015-05-15 13:42:27 -04:00
Gregory R. Lee 44f1fd37f2 add multichannel support to structural_similarity 2015-05-15 13:42:14 -04:00
Gregory R. Lee 49a1060719 update structural similarity to nD implementation with gaussian weighting to match other reference implementations 2015-05-15 13:42:06 -04:00
Stefan van der Walt 4b0456b8ef Merge pull request #1488 from danielwe/blob-float-sigma 
Avoid truncating sigma to integer in blob detection (fixes tests for #1257)
 2015-05-14 23:42:01 -07:00
Joel Frederico 575689baf2 Update measure.regionprops.weighted_moments_central doc 
The documentation is misleading. In fact, the code does do what a user would expect: use the weighted centroid coordinates, not the centroid coordinates. It's one word, but it's an important one!

https://github.com/scikit-image/scikit-image/blob/master/skimage/measure/_regionprops.py#L291
 2015-05-14 17:15:00 -07:00
Juan Nunez-Iglesias a74ba0ec54 Merge pull request #1502 from blink1073/test-mulitpage-rgb-tiff 
Add Test for Multipage RGB TIFF
 2015-05-13 13:46:06 +10:00
Steven Silvester dfaab1957e Add a multipage tiff test and cleanup test_tifffile 2015-05-12 21:10:23 -05:00
Stefan van der Walt 2b10dda6b8 Merge pull request #1485 from emmanuelle/model_binary 
Add rounded blobs generation
 2015-05-12 12:21:47 -07:00
arve0 0eb7d132d3 pop_bilateral docstring: the->pixels 2015-05-12 15:30:14 +02:00
Steven Silvester e240dff395 Reinstate explicit plugin 2015-05-11 20:54:46 -05:00
emmanuelle 1ef90468e0 Modified (again) test accuracy. 2015-05-11 22:58:16 +02:00
Steven Silvester 0491326d22 Remove explicit call to use_plugin 2015-05-10 20:49:46 -05:00
emmanuelle e751d245f3 Modified test with a less stringent condition on numerical value for the 
mean value of blobs image.
 2015-05-10 23:29:54 +02:00
Johannes Schönberger 0c69cdc5e7 Fix out-of-bounds access in color LUT for NaN values 2015-05-10 13:47:42 -04:00
Steven Silvester b479eabd7e Fix failing pil test 2015-05-09 16:56:10 -05:00
Steven Silvester 5f067ff43b Move tests to pil plugin and fix file path 2015-05-09 10:22:48 -05:00
Steven Silvester d351c13c2d Add tests for multipage_rgb tif 2015-05-09 09:32:56 -05:00
Steven Silvester ef9c4d8d19 Fix handling of img_num=0 cases 2015-05-09 09:32:33 -05:00
Steven Silvester 883baa0328 Add a multi-page rbg tiff file 2015-05-09 09:10:34 -05:00
Steven Silvester 556cb3452c Merge pull request #1498 from cgohlke/patch-2 
Fix skimage.io.imread returns incorrect dimensions
 2015-05-09 09:02:41 -05:00
emmanuelle 073c9735dc Fixed example in doctest. 2015-05-09 14:51:41 +02:00
emmanuelle 1c3af75dd3 Addressed a few minor issues raised by Juan and Stefan. 2015-05-09 10:23:49 +02:00
Stefan van der Walt ef8f8c70d6 Merge pull request #1494 from arve0/reset_button_crop_plugin 
Add reset button to crop plugin
 2015-05-08 01:35:00 -07:00
Christoph Gohlke 549def734e Fix failing test 2015-05-07 17:35:48 -07:00
Christoph Gohlke 3d3351b9fa Fix failing test 2015-05-07 17:34:05 -07:00
Christoph Gohlke 47cfcb4b8b TST skimage.io.imread returns incorrect dimensions 2015-05-07 15:07:59 -07:00
Christoph Gohlke 3c8bf02fa5 Fix skimage.io.imread returns incorrect dimensions 
Fixes #1496
 2015-05-07 15:03:25 -07:00
arve0 d7a80f55f3 add reset button to crop plugin 2015-05-07 10:14:38 +02:00
Stefan van der Walt 7741317cbb Merge pull request #1475 from gustavla/slic-fix 
Fix crashing bug in slic
 2015-05-06 00:22:48 -07:00