Commit Graph

19 Commits

Author SHA1 Message Date
Tony S Yu dc6c3d0222 Rename test module to match module. 2012-05-03 17:45:36 -04:00
Tony S Yu 0edefedc50 Replace import * with import grey. 2012-05-03 17:35:11 -04:00
Tony S Yu 8fb597b141 Fix dtype compatibility for functions in morphology.grey
Cast input images using ``img_as_ubyte``. Note, tests don't currently pass for integer arrays (test skipped).
2012-05-03 16:22:00 -04:00
Tony S Yu 284753a7a4 Make test module runnable. 2012-05-03 16:21:59 -04:00
Tony S Yu cfa9bbfc40 Rename greyscale morphology functions.
Remove "greyscale" prefix on functions in ``morphology.grey``. To avoid confusion (and name clashes), ``greyscale_open`` and ``greyscale_close`` were renamed ``opening`` and ``closing`` (instead of ``open`` and ``close``). As a bonus, these names match scipy.ndimage.
2012-05-03 16:21:59 -04:00
Tony S Yu 29a2fc3c22 Remove unused imports 2012-05-03 16:21:59 -04:00
Stefan van der Walt c78ea107aa ENH: Add background labelling. 2011-12-22 04:47:24 -08:00
Stefan van der Walt b83ece8b05 ENH: Allow choice between 4 and 8 neighbor mode. Improve documentation. 2011-12-16 23:47:32 -08:00
Stefan van der Walt 3495767358 ENH: Rename convex_hull to convex_hull_image to allow later clean API addition of convex_hull with labels. 2011-11-02 09:38:54 -07:00
Stefan van der Walt 33469fa69e BUG: Allow test suite to pass with scipy < 0.9. 2011-10-28 14:56:41 -07:00
Stefan van der Walt 2191d29611 ENH: In test, do not compute hull twice. 2011-10-28 14:36:05 -07:00
Stefan van der Walt b34b9d8ddd ENH: Only perform convex hull on select candidate pixels. Gets us a factor 30 speedup. 2011-10-26 23:17:00 -07:00
Stefan van der Walt 74f7e01e42 ENH: Improve convex_hull execution speed. 2011-10-26 19:55:46 -07:00
Stefan van der Walt b5ad567a68 ENH: Add binary convex hull computation. 2011-10-26 17:43:30 -07:00
emmanuelle 736802bad4 Medial axis transform (skeletonization) from cell profiler
* medial_axis function in morphology.skeletonize
 * plot_medial_axis.py example for the gallery

Compared to the skeletonize algorithm in morphology.skeletonize,
medial_axis is faster because it processes all pixel in one pass.
However, the resulting skeleton has more branches, that may be unwanted
depending on the application.
2011-10-24 23:22:58 +02:00
emmanuelle 0f31034a46 First integration of cell profiler medial axis transform
(skeletonization in cell profiler)
2011-10-24 23:22:58 +02:00
Stefan van der Walt 5ec4fdec09 PKG: Import skimage instead of scikits.image in changes made since rename. 2011-10-23 22:55:55 -07:00
Stefan van der Walt 91d9949282 PKG: Move remaining files that changed since skimage rename. 2011-10-23 22:34:28 -07:00
Nelle Varoquaux 114cf44c77 Renamed scikits.image to skimage 2011-10-18 21:12:27 +02:00