c1f3515e00
Speed up transformation of piecewise-affine
2012-09-03 21:46:17 +02:00
7983f354b8
Apply PEP8 and improve docs
2012-09-03 21:46:17 +02:00
87a3025196
BUG: Add missing imports in transform module.
2012-09-03 10:09:13 -07:00
3e3e0928d7
Wrap long line
2012-09-03 13:01:22 +01:00
ea5fe5ff9c
Setting _matrix to None, because the transform is not of this form
2012-09-03 13:00:32 +01:00
839442aad2
Improve comments
2012-09-03 13:00:32 +01:00
5617bc563f
Improve comments
2012-09-03 13:00:32 +01:00
07d4e333f0
Update doc strings with piecewise affine
2012-09-03 13:00:32 +01:00
be1143046b
Achieved functional piecewise affine transform
2012-09-03 13:00:32 +01:00
92f8643218
Initial work to introduce piecewise affine transform
2012-09-03 13:00:32 +01:00
2949d18247
Merge pull request #295 from tonysyu/doc-cleanups
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Doc cleanups
2012-09-02 22:12:13 -07:00
dfbbb4d766
Merge pull request #279 from emmanuelle/fix_doc
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Fix doc
2012-09-02 17:13:24 -07:00
427a79fc6a
STY: Clean up whitespace
2012-09-02 19:32:45 -04:00
3321e94d1d
DOC: Wrap long lines
2012-09-02 19:23:41 -04:00
52b5383b09
DOC: Fix rendering bug.
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``**`` is interpreted by Sphinx as the start of bold text. Wrap in backticks to prevent misinterpretation.
2012-09-02 18:50:16 -04:00
27cac73e16
DOC: Fix section titles to match numpy doc standard
2012-09-02 18:33:38 -04:00
d67e81742d
DOC: Shorten plugin description so it fits in table
2012-09-02 18:10:14 -04:00
84ac91927d
DOC: Fix citation syntax
2012-09-02 18:03:55 -04:00
398344787f
DOC: Reformat shape argument
2012-09-02 17:53:23 -04:00
dc10efe4e1
DOC: Fix formatting to prevent Sphinx warnings
2012-09-02 17:53:22 -04:00
1d91ed98ff
DOC: Fix Sphinx warning.
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Trailing underscores are used to mark links. Wrap in name in backticks to prevent Sphinx for confusing this as a link.
2012-09-02 17:53:22 -04:00
bfa6f05e1f
DOC: Change title to match numpy docstring standard
2012-09-02 17:53:22 -04:00
ec22dba257
DOC: Fix Sphinx warnings for regionprops
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In particular:
- Indented equations in docstring for the `properties` parameter *must* be surrounded by whitespace to prevent Sphinx warnings.
- Fix reference rendering
2012-09-02 17:53:22 -04:00
b1098f69f8
DOC: removed unused import in docstring
2012-09-02 23:21:13 +02:00
4d1533ab25
Merge pull request #278 from wuan/tv_denoise_fix
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fixed data of tv_denoise result images to be in default range for floats
2012-09-02 14:14:38 -07:00
c851053084
specified float array result in docstring
2012-09-02 21:18:00 +02:00
12b8d8d051
cleanup of tests hence all results of tv denoise operations are returned as float
2012-09-02 21:17:18 +02:00
a9116f877e
Hide coefficient variable of geometric transforms
2012-09-02 20:15:44 +02:00
8b15656feb
Change import to silence import errors in docs.
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`import skimage` in submodules seems to cause issues with Sphinx autodocs. (Maybe some sort of circular import issue.) Note the `ImportErrors` fixed by this commit don't actually cause sphinx build errors; Sphinx seems to capture the errors, but it's annoyingly noisy, nonetheless.
2012-09-02 12:23:52 -04:00
58a57238cc
Merge pull request #282 from JDWarner/multispectral_random_walker
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Multispectral random walker
2012-09-02 06:23:58 -07:00
aa08e8a559
Fix for predefined output array
2012-09-02 13:41:25 +02:00
c47e230847
Merge pull request #289 from tonysyu/qtmpl-collection-viewer
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ENH: Add CollectionViewer.
2012-09-02 04:39:23 -07:00
1dc50c108a
Merge pull request #290 from tonysyu/qtmpl-lineprofile
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ENH: Add line profile plugin to viewer.
2012-09-02 04:37:11 -07:00
2c37c70ca3
Fix support for predefined output array
2012-09-02 13:35:12 +02:00
373b3293ee
Use numpy testing functions
2012-09-02 13:28:07 +02:00
de47332bd2
Add fast morphological operations for binary images
2012-09-02 13:25:52 +02:00
2842515dc3
Improve doc string layout
2012-09-02 10:34:09 +02:00
224fcb5d01
Convert selem to uint8
2012-09-02 09:58:02 +02:00
41ea3ba7fd
Add line profile plugin back in.
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I saved a copy of the line profile plugin in a branch and then deleted the plugin from the main qtmpl-viewer branch. Unfortunately, I forgot that rebasing off the main branch would erase the plugin. This commit just adds the plugin back.
2012-09-01 15:42:52 -04:00
7d858a8ba9
ENH: Add CollectionViewer
2012-09-01 15:31:34 -04:00
a5fe574bd9
Remove unused imports and add missing types
2012-09-01 14:57:56 +02:00
b05c062d24
Refactor erosion and dilation for better performance
2012-09-01 14:54:17 +02:00
74797d6205
Fix decision whether to use warping or fast warping
2012-09-01 09:17:16 +02:00
06d9f7110f
Revert to non parallelized execution
2012-09-01 09:09:25 +02:00
c8c1d5c7e7
Merge pull request #275 from ahojnnes/warps
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ENH: Refactor image warps.
2012-08-31 18:12:08 -07:00
b2e4fd6f32
Add parallel execution support
2012-08-31 23:46:23 +02:00
e3c68e3bbc
Merge pull request #284 from ahojnnes/regionprops-coords
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Add new Coordinates property to regionprops
2012-08-31 13:53:26 -07:00
e8ddcefae3
PEP8 compliance, removed scaling, different data parsing.
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This commit represents all recommended changes since the last
commit, notably:
* PEP8 compliance (in new sections; a few old ones still
noncompliant w/indentations)
* Moved `depth` kwarg to end of list and in docstring.
Clarified `depth` docstring, and added section in Notes
further explaining this parameter.
* Added section in Notes warning that for multichannel inputs,
all channels are combined during scaling. The user must
separately normalize each channel prior to calling
random_walker()
* New method for parsing data, allowing more elegant gradient
calculation code. Probably also more extensible. The 2D
multispectral case forced this change.
* New test: `test_multispectral_2d()`
2012-08-31 14:14:46 -05:00
873aa6a5dc
Merge pull request #281 from mkcor/harris_threshold
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Harris threshold
2012-08-31 11:56:02 -07:00
cdff128a43
Add new Coordinates property to regionprops
2012-08-30 21:38:33 +02:00
Johannes Schönberger