Johannes Schönberger
52f01d1f85
Merge pull request #731 from ankit-maverick/SimilarityTransform
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Correcting a bug in SimialarityTransform
2013-09-18 22:57:05 -07:00
Ankit Agrawal
0ed1e22034
Correcting bug in SimialarityTransform
2013-09-19 10:23:03 +05:30
Johannes Schönberger
1b4a06f5aa
Merge pull request #727 from jni/fix-small
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Fix type hierarchy check in remove_small_objects
2013-09-14 01:45:18 -07:00
Johannes Schönberger
445dd7e859
Merge pull request #630 from JDWarner/improve_noise
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ENH: Improve random_noise with better param names & docfixes
2013-09-14 01:41:08 -07:00
Johannes Schönberger
968206ce39
Merge pull request #704 from alexis-mignon/master
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Adding non rotation invariant uniform LBPs
2013-09-14 01:24:36 -07:00
Juan Nunez-Iglesias
2af5c41571
Fix type hierarchy check in remove_small_objects
2013-09-09 13:53:33 +10:00
radioxoma and radioxoma
c8c95c0e63
Fix import list sequence
2013-09-07 19:10:40 +03:00
radioxoma and radioxoma
04804cc81c
Logarithm optimisation
2013-09-07 19:10:40 +03:00
radioxoma and radioxoma
9e74f4eb70
Added Yen tests, typo fixed
2013-09-07 19:10:40 +03:00
radioxoma and radioxoma
8beb2ae605
Yen PEP8 and docstrings
2013-09-07 19:10:40 +03:00
radioxoma and radioxoma
e41887c66d
Codestyle improvement
2013-09-07 19:10:40 +03:00
radioxoma and radioxoma
a315ae718d
Add Yen threshold method
2013-09-07 18:48:46 +03:00
Josh Warner (Mac)
6f5f6a0a7a
DOC: Further improvements to naming conventions.
2013-09-07 00:39:04 -05:00
Emmanuelle Gouillart
8ed56abb42
Merge pull request #469 from JDWarner/add_marching_cubes
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3D Marching Cubes
2013-09-03 04:55:29 -07:00
Josh Warner (Mac)
abc7a16a80
STYLE: Use np.array instead of np.r_ and import Poly3DCollection
2013-09-02 15:31:51 -05:00
Josh Warner (Mac)
1174d6fbc5
FIX: Errors in unit tests
2013-09-01 22:05:39 -05:00
Josh Warner (Mac)
50d73fdd62
TEST: Add test suite for draw3d (ellipsoid/ellipsoid_stats)
2013-09-01 21:31:53 -05:00
Josh Warner (Mac)
14a0685838
MAINT: Refactor ellipsoid generator into skimage.draw
2013-09-01 20:51:20 -05:00
Josh Warner (Mac)
d0d9fee36e
DOC: Minor documentation formatting fixes in marching cubes
2013-09-01 20:49:58 -05:00
Stefan van der Walt
b0d3b92e74
Add skip parameter to view_as_windows.
2013-09-01 23:50:54 +02:00
Josh Warner (Mac)
997339beae
FEAT: add tests for marching cubes and mesh surface area
2013-08-30 12:36:32 -05:00
Josh Warner (Mac)
b6f25906d6
DOCFIX: clarify docstrings and output vertex dimension ordering
2013-08-30 12:36:31 -05:00
Josh Warner (Mac)
19b8831a0d
FIX: incorrect name for unpack_unique_verts, revert axis ordering
2013-08-30 12:36:31 -05:00
Josh Warner (Mac)
fcd20e5660
FIX: use memoryviews, docfix, and change tri_list to face_list
2013-08-30 12:36:31 -05:00
Josh Warner (Mac)
164b416bd9
FIX: volume now directly cast, docfixes, C-contiguous ordering
2013-08-30 12:36:31 -05:00
Josh Warner (Mac)
f8cc4799da
FIX: dimension ordering now correct (x, y, z)
2013-08-30 12:36:31 -05:00
Josh Warner (Mac)
165de870d0
fix error in triangulation of case 120
2013-08-30 12:36:31 -05:00
JDWarner
296d102047
fix: symmetric ambiguous dual-plane cases require special treatment
2013-08-30 12:36:31 -05:00
JDWarner
44c04996c7
move unpack_unique_verts to Cython for speed
2013-08-30 12:36:31 -05:00
Josh Warner (Mac)
d2e51aa035
fix import error from _marching_cubes_cy
2013-08-30 12:36:31 -05:00
Josh Warner (Mac)
9a86aba226
rename files to conform with naming conventions
2013-08-30 12:36:31 -05:00
Josh Warner (Mac)
9779cd5e4a
fix: bug in second _append_tris call in case 125
2013-08-30 12:36:31 -05:00
Josh Warner (Mac)
5b990a0856
fix import of _marching_cubes
2013-08-30 12:36:31 -05:00
Josh Warner (Mac)
855031ad47
add _marching_cubes.pyx to list of Cython modules to build
2013-08-30 12:36:30 -05:00
Josh Warner (Mac)
84618af7c7
import marching_cubes and mesh_surface_area
2013-08-30 12:36:30 -05:00
Josh Warner (Mac)
5eba5a42a7
FEAT: Full 3d anisotropic implementation of marching cubes
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Also includes surface area calculation algorithm from
generated mesh.
Convenient output to visualize with `mayavi.mlab`.
Efficient Cython implementation.
2013-08-30 12:34:55 -05:00
Juan Nunez-Iglesias
55e42309b8
Merge pull request #712 from emmanuelle/gaussian_filter
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Add a wrapper around `scipy.ndimage.gaussian_filter` with useful default behaviors.
2013-08-30 10:27:41 -07:00
Emmanuelle Gouillart
9795d3fad4
Gaussian filter function: changed the default value of multichannel
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Now we try to guess automatically whether the image is grayscale or RGB
2013-08-29 23:14:30 +02:00
Alexis Mignon
f4a097713c
Changed link to the reference [2]
2013-08-25 17:13:25 +02:00
Emmanuelle Gouillart
b4242ca3fb
[BUG] iterable sigma and multichannel
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+ docstring improvement
2013-08-25 16:41:37 +02:00
Alexis Mignon
515335e917
Corrected name in reference [2]
2013-08-25 15:05:35 +02:00
Emmanuelle Gouillart
15b4a4d979
DOC: corrected description of multichannel parameter
2013-08-25 15:04:22 +02:00
Alexis Mignon
7b022c8b5f
Finalized changes. Added reference for non rotation-invariant uniform patterns. Added test case. Modified comments to clarify the process, and changed the code to make it more consistent with explanations and actuall encoding
2013-08-25 14:56:13 +02:00
Emmanuelle Gouillart
082586c10c
Added a wrapper around ndimage's Gaussian filter
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This version of the Gaussian filter
* uses 'nearest' as the default boundary mode. This can be discussed,
but I had the impression that for images this is the most relevant
mode ('extending' boundaries)
* has a `multichannel` keyword, so that each color channel can be
filtered separately. For now no attempt is made at guessing whether
the image has color channels or not.
2013-08-25 14:50:55 +02:00
Emmanuelle Gouillart
1a4ea5c970
Merge pull request #710 from jni/pyamg-depends
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Add pyamg to the optional dependencies
2013-08-25 04:56:41 -07:00
Emmanuelle Gouillart
4d80670925
Merge pull request #672 from jni/chull-fix
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Convex hull fix
2013-08-25 04:48:20 -07:00
Juan Nunez-Iglesias
13e83be692
Update PyAMG URL (no longer in Google Code)
2013-08-25 12:44:19 +02:00
Juan Nunez-Iglesias
072eb7640a
Add docstring note explaining coord use case
2013-08-25 11:06:31 +02:00
Juan Nunez-Iglesias
cb28bba6ee
Add note describing array copy if discontiguous
2013-08-25 11:04:50 +02:00
Alexis Mignon
eae691cf21
Corrected duplicate variable declarations, variable name change from 'var_index' to 'rot_index' and corrected minor bugs
2013-08-22 15:24:49 +02:00
Johannes Schönberger