Tony S Yu
b5d9106966
ENH: Use Cython data types instead of Numpy dtypes.
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Conversion to Memoryviews didn't improve performance, unfortunately. Minor slow-down of 5--10%.
2012-08-19 11:56:16 -04:00
James Bergstra
80e72c15be
Merge pull request #1 from ahojnnes/default-params-geometric
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Default params geometric
2012-08-19 04:55:52 -07:00
Johannes Schönberger
d511bd8429
fix comment
2012-08-19 13:06:27 +02:00
Johannes Schönberger
6ea4827f9d
add test case for polynomial transform initialization
2012-08-19 13:04:58 +02:00
Johannes Schönberger
195bdc8c00
complete default matrix initialization of geometric transforms
2012-08-19 13:02:03 +02:00
Tony S Yu
b614b34eab
ENH: Add test of reconstruction by erosion.
2012-08-18 23:20:49 -04:00
Tony S Yu
3ad1ed3a28
DOC: Remove peak detection tutorial.
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The tutorial needs a lot of work and isn't a crucial part of this PR. Note: tutorial saved in a separate branch.
2012-08-18 23:09:47 -04:00
Tony S Yu
2e87dd7a3c
ENH: Add examples of morphological reconstruction.
2012-08-18 23:06:08 -04:00
Tony S Yu
79fca0e20d
DOC: Reorder docstring sections.
2012-08-18 21:54:06 -04:00
Tony S Yu
ab7626da3d
STY: Rename variables for clarity.
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In particular, it wasn't clear whether `image` was the seed image or the mask image rnd `values` was used to refer to both image intensity values and their rank-order.
2012-08-18 21:41:01 -04:00
Tony S Yu
7a56a7f35e
DOC: Clarify code comments and docstring
2012-08-18 18:04:01 -04:00
Tony S Yu
969772c036
ENH: Add reconstruction by erosion.
2012-08-18 17:59:44 -04:00
James Bergstra
2724f50b4c
FIX: added default identity matrix to SimilarityTransform to match AffineTransform
2012-08-18 10:12:22 -04:00
Tony S Yu
29c84a8a7b
STY: Rename returned image to distinguish input from output.
2012-08-17 23:02:08 -04:00
Tony S Yu
33a19a8c7b
DOC: add comments to clarify algorithm
2012-08-17 22:48:02 -04:00
James Bergstra
d0870c6d68
ENH: initialize AffineTransform to identity when no args are provided
2012-08-17 17:55:26 -04:00
Stefan van der Walt
90e61e22ae
Merge pull request #240 from tonysyu/rename-duplicates
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BUG: Rename modules with duplicate function names.
2012-08-16 23:01:48 -07:00
Tony S Yu
e6d03eaebc
STY: Use standard skimage data type conversion.
2012-08-17 00:42:56 -04:00
Tony S Yu
1ea41173b8
BUG: Rename files with similar function, python module, and cython extension names.
2012-08-16 22:42:27 -04:00
Stefan van der Walt
3a98651123
Merge pull request #252 from gatagat/patch-regionprops
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BUG: Fix Orientation for diagonal regions in regionprops.
2012-08-16 14:11:10 -07:00
Tomas Kazmar
5efb3d41c2
Wrap long lines.
2012-08-16 16:16:56 +02:00
Tomas Kazmar
31ba6a59b4
BUG: Fix Orientation for diagonal regions in regionprops.
2012-08-16 14:05:03 +02:00
Stefan van der Walt
c131a200c5
Merge pull request #249 from ahojnnes/peak-local-max
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BUG: Fix num_peaks parameter bug in peak_local_max.
2012-08-15 00:53:41 -07:00
Johannes Schönberger
bb27e37710
extend test cases for num_peaks parameter of peak_local_max
2012-08-14 07:59:54 +02:00
Stefan van der Walt
b1139c724d
DOC: Fix typos in see-also references.
2012-08-13 12:02:32 -07:00
Stefan van der Walt
4e50fd2798
Merge pull request #197 from ahojnnes/projection
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ENH: Add geometric transformations.
2012-08-12 18:21:44 -07:00
wilsaj
fabedb58ec
add unit test for Image._repr_png_() with PIL plugin
2012-08-12 18:54:43 -05:00
wilsaj
9bd445700a
add note about to display protocol to Image docstring
2012-08-12 18:20:58 -05:00
Johannes Schönberger
4541146561
raise exception if matrix and implicit parameter arguments provided
2012-08-12 10:13:29 +02:00
Steven Silvester
d9926d8de4
Passed all tests with full coverage, PEP8 and Pylint performed.
2012-08-11 21:28:08 -05:00
Steven Silvester
55a3f22ba2
Improved support for color images using lab transform.
2012-08-11 15:48:18 -05:00
Johannes Schönberger
a87779b650
fix num_peaks parameter bug in peak_local_max
2012-08-10 20:45:50 +02:00
Andreas Mueller
a75b7ca7f5
Merge pull request #247 from ahojnnes/label-dtype-fix
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cast input of image label function
2012-08-10 09:09:39 -07:00
Andreas Mueller
8d769a4cd9
ENH Felzenszwalbs segmentation somewhat faster
2012-08-10 10:48:38 +01:00
Andreas Mueller
312b03d1b1
ENH more speeeeed
2012-08-10 10:35:23 +01:00
Andreas Mueller
8f5337a2bf
ENH added some cdefs
2012-08-10 10:31:23 +01:00
Andreas Mueller
f88a29b091
ENH minor speedups.
2012-08-10 10:03:20 +01:00
Johannes Schönberger
6ead3097c2
cast input of image label function
2012-08-10 09:10:06 +02:00
Johannes Schönberger
08f4379e0e
add information about unit of angles to doc strings
2012-08-10 08:19:48 +02:00
Johannes Schönberger
c7cac1cb0f
fix, improve and extend test cases related to geometric transformations
2012-08-10 08:16:05 +02:00
Johannes Schönberger
8ab0c9a329
add test for shape of transformation matrix
2012-08-10 08:15:06 +02:00
Johannes Schönberger
724a931d42
adapt geometric example script to new API and improve some expressions
2012-08-10 07:49:04 +02:00
Johannes Schönberger
a3ec8e0482
change inverse_map parameter handling of warp function
2012-08-10 07:35:16 +02:00
Tony S Yu
9cea60d817
STY: minor PEP8 change
2012-08-09 09:49:22 -04:00
Johannes Schönberger
ff1c8c4376
fix typo
2012-08-09 10:30:40 +02:00
Johannes Schönberger
8e242d0436
add mathematical description of estimation in doc strings
2012-08-09 10:28:05 +02:00
Johannes Schönberger
76931fa61b
handle composition of transformations with implicit parameters with __init__
2012-08-09 09:21:49 +02:00
Johannes Schönberger
1bb896e487
remove confusing comment
2012-08-09 08:19:37 +02:00
Johannes Schönberger
5085ded994
fix geometric transformation example after refactoring the module
2012-08-09 07:57:44 +02:00
Johannes Schönberger
e5ed1882d3
fix and improve comments, doc strings, variable names for consistency reasons
2012-08-09 07:51:58 +02:00
Tony S Yu