#!/usr/bin/env bash set -ex PY=$TRAVIS_PYTHON_VERSION section "Test.with.min.requirements" nosetests $TEST_ARGS skimage section_end "Test.with.min.requirements" section "Build.docs" if [[ ($PY != 2.6) && ($PY != 3.2) ]]; then sudo apt-get install -qq texlive texlive-latex-extra dvipng make html fi section_end "Build.docs" section "Flake8.test" flake8 --exit-zero --exclude=test_*,six.py skimage doc/examples viewer_examples section_end "Flake8.test" section "Install.optional.dependencies" # Install Qt and then update the Matplotlib settings if [[ $PY == 2.7* ]]; then sudo apt-get install -q python-qt4 # http://stackoverflow.com/a/9716100 LIBS=( PyQt4 sip.so ) VAR=( $(which -a python$PY) ) GET_PYTHON_LIB_CMD="from distutils.sysconfig import get_python_lib; print (get_python_lib())" LIB_VIRTUALENV_PATH=$(python -c "$GET_PYTHON_LIB_CMD") LIB_SYSTEM_PATH=$(${VAR[-1]} -c "$GET_PYTHON_LIB_CMD") for LIB in ${LIBS[@]} do sudo ln -sf $LIB_SYSTEM_PATH/$LIB $LIB_VIRTUALENV_PATH/$LIB done else sudo apt-get install -q libqt4-dev retry pip install -q PySide $WHEELHOUSE python ~/venv/bin/pyside_postinstall.py -install fi # imread does NOT support py3.2 if [[ $PY != 3.2 ]]; then sudo apt-get install -q libtiff4-dev libwebp-dev libpng12-dev xcftools retry pip install -q imread fi # Install SimpleITK from wheelhouse if available (not 3.2 or 3.4) if [[ $PY =~ 3\.[24] ]]; then echo "SimpleITK unavailable on $PY" else retry pip install -q SimpleITK $WHEELHOUSE fi sudo apt-get install -q libfreeimage3 retry pip install -q astropy $WHEELHOUSE if [[ $PY == 2.* ]]; then retry pip install -q pyamg fi retry pip install -q tifffile section_end "Install.optional.dependencies" section "Run.doc.examples" # Matplotlib settings - do not show figures during doc examples if [[ $PY == 2.7* ]]; then MPL_DIR=$HOME/.matplotlib else MPL_DIR=$HOME/.config/matplotlib fi mkdir -p $MPL_DIR touch $MPL_DIR/matplotlibrc echo 'backend : Template' > $MPL_DIR/matplotlibrc for f in doc/examples/*.py; do python "$f" if [ $? -ne 0 ]; then exit 1 fi done section_end "Run.doc.examples" section "Run.doc.applications" for f in doc/examples/applications/*.py; do python "$f" if [ $? -ne 0 ]; then exit 1 fi done # Now configure Matplotlib to use Qt4 if [[ $PY == 2.7* ]]; then MPL_QT_API=PyQt4 export QT_API=pyqt else MPL_QT_API=PySide export QT_API=pyside fi echo 'backend: Agg' > $MPL_DIR/matplotlibrc echo 'backend.qt4 : '$MPL_QT_API >> $MPL_DIR/matplotlibrc section_end "Run.doc.applications" section "Test.with.optional.dependencies" # run tests again with optional dependencies to get more coverage if [[ $PY == 3.3 ]]; then TEST_ARGS="$TEST_ARGS --with-cov --cover-package skimage" fi nosetests $TEST_ARGS section_end "Test.with.optional.dependencies"