"""Testing utilities.""" import os import re from tempfile import NamedTemporaryFile from skimage import ( data, io, img_as_uint, img_as_float, img_as_int, img_as_ubyte) from numpy import testing import numpy as np SKIP_RE = re.compile("(\s*>>>.*?)(\s*)#\s*skip\s+if\s+(.*)$") def _assert_less(a, b, msg=None): message = "%r is not lower than %r" % (a, b) if msg is not None: message += ": " + msg assert a < b, message def _assert_greater(a, b, msg=None): message = "%r is not greater than %r" % (a, b) if msg is not None: message += ": " + msg assert a > b, message try: from nose.tools import assert_less except ImportError: assert_less = _assert_less try: from nose.tools import assert_greater except ImportError: assert_greater = _assert_greater def doctest_skip_parser(func): """ Decorator replaces custom skip test markup in doctests Say a function has a docstring:: >>> something # skip if not HAVE_AMODULE >>> something + else >>> something # skip if HAVE_BMODULE This decorator will evaluate the expresssion after ``skip if``. If this evaluates to True, then the comment is replaced by ``# doctest: +SKIP``. If False, then the comment is just removed. The expression is evaluated in the ``globals`` scope of `func`. For example, if the module global ``HAVE_AMODULE`` is False, and module global ``HAVE_BMODULE`` is False, the returned function will have docstring:: >>> something # doctest: +SKIP >>> something + else >>> something """ lines = func.__doc__.split('\n') new_lines = [] for line in lines: match = SKIP_RE.match(line) if match is None: new_lines.append(line) continue code, space, expr = match.groups() try: # Works as a function decorator if eval(expr, func.__globals__): code = code + space + "# doctest: +SKIP" except AttributeError: # Works as a class decorator if eval(expr, func.__init__.__globals__): code = code + space + "# doctest: +SKIP" new_lines.append(code) func.__doc__ = "\n".join(new_lines) return func def roundtrip(img, plugin, suffix): """Save and read an image using a specified plugin""" if not '.' in suffix: suffix = '.' + suffix temp_file = NamedTemporaryFile(suffix=suffix, delete=False) temp_file.close() fname = temp_file.name io.imsave(fname, img, plugin=plugin) try: os.remove(fname) except Exception: pass return io.imread(fname, plugin=plugin) def ubyte_check(plugin, fmt='png'): """Check roundtrip behavior for images that can only be saved as uint8 All major input types should be handled as ubytes and read back correctly. """ img = img_as_ubyte(data.chelsea()) r1 = roundtrip(img, plugin, fmt) testing.assert_allclose(img, r1) img2 = img > 128 r2 = roundtrip(img2, plugin, fmt) testing.assert_allclose(img2.astype(np.uint8), r2) img3 = img_as_float(img) r3 = roundtrip(img3, plugin, fmt) testing.assert_allclose(r3, img) img4 = img_as_int(img) r4 = roundtrip(img4, plugin, fmt) testing.assert_allclose(r4, img) img5 = img_as_uint(img) r5 = roundtrip(img5, plugin, fmt) testing.assert_allclose(r5, img) def full_range_check(plugin, fmt='png'): """Check the roundtrip behavior for images that support most types. All major input types should be handled, except bool is treated as ubyte and float can treated as uint16 or float. """ img = img_as_ubyte(data.moon()) r1 = roundtrip(img, plugin, fmt) testing.assert_allclose(img, r1) img2 = img > 128 r2 = roundtrip(img2, plugin, fmt) testing.assert_allclose(img2.astype(np.uint8), r2) img3 = img_as_float(img) r3 = roundtrip(img3, plugin, fmt) if r3.dtype.kind == 'f': testing.assert_allclose(img3, r3) else: testing.assert_allclose(r3, img_as_uint(img)) img4 = img_as_int(img) r4 = roundtrip(img4, plugin, fmt) testing.assert_allclose(r4, img4) img5 = img_as_uint(img) r5 = roundtrip(img5, plugin, fmt) testing.assert_allclose(r5, img5) if __name__ == '__main__': ubyte_check('pil') full_range_check('pil') ubyte_check('pil', 'bmp') full_range_check('pil', 'tiff')