import itertools as it import warnings import numpy as np from numpy.testing import assert_equal, assert_array_equal from skimage.segmentation import slic def test_color_2d(): rnd = np.random.RandomState(0) img = np.zeros((20, 21, 3)) img[:10, :10, 0] = 1 img[10:, :10, 1] = 1 img[10:, 10:, 2] = 1 img += 0.01 * rnd.normal(size=img.shape) img[img > 1] = 1 img[img < 0] = 0 with warnings.catch_warnings(): warnings.simplefilter("ignore") seg = slic(img, sigma=0, n_segments=4) # we expect 4 segments assert_equal(len(np.unique(seg)), 4) assert_array_equal(seg[:10, :10], 0) assert_array_equal(seg[10:, :10], 2) assert_array_equal(seg[:10, 10:], 1) assert_array_equal(seg[10:, 10:], 3) def test_gray_2d(): rnd = np.random.RandomState(0) img = np.zeros((20, 21)) img[:10, :10] = 0.33 img[10:, :10] = 0.67 img[10:, 10:] = 1.00 img += 0.0033 * rnd.normal(size=img.shape) img[img > 1] = 1 img[img < 0] = 0 seg = slic(img, sigma=0, n_segments=4, ratio=20.0, multichannel=False) assert_equal(len(np.unique(seg)), 4) assert_array_equal(seg[:10, :10], 0) assert_array_equal(seg[10:, :10], 2) assert_array_equal(seg[:10, 10:], 1) assert_array_equal(seg[10:, 10:], 3) def test_color_3d(): rnd = np.random.RandomState(0) img = np.zeros((20, 21, 22, 3)) slices = [] for dim_size in img.shape[:-1]: midpoint = dim_size // 2 slices.append((slice(None, midpoint), slice(midpoint, None))) slices = list(it.product(*slices)) colors = list(it.product(*(([0, 1],) * 3))) for s, c in zip(slices, colors): img[s] = c img += 0.01 * rnd.normal(size=img.shape) img[img > 1] = 1 img[img < 0] = 0 seg = slic(img, sigma=0, n_segments=8) assert_equal(len(np.unique(seg)), 8) for s, c in zip(slices, range(8)): assert_array_equal(seg[s], c) def test_gray_3d(): rnd = np.random.RandomState(0) img = np.zeros((20, 21, 22)) slices = [] for dim_size in img.shape: midpoint = dim_size // 2 slices.append((slice(None, midpoint), slice(midpoint, None))) slices = list(it.product(*slices)) shades = np.arange(0, 1.000001, 1.0/7) for s, sh in zip(slices, shades): img[s] = sh img += 0.001 * rnd.normal(size=img.shape) img[img > 1] = 1 img[img < 0] = 0 seg = slic(img, sigma=0, n_segments=8, ratio=20.0, multichannel=False) assert_equal(len(np.unique(seg)), 8) for s, c in zip(slices, range(8)): assert_array_equal(seg[s], c) if __name__ == '__main__': from numpy import testing testing.run_module_suite()