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scikit-image/scikits/image/transform/_project.pyx
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Cython

#cython: cdivison=True boundscheck=False
cimport cython
cimport numpy as np
import numpy as np
import cython
from cython.operator import dereference
np.import_array()
cdef extern from "math.h":
double floor(double)
double fmod(double, double)
cdef double get_pixel(double *image, int rows, int cols,
int r, int c, char mode, double cval=0):
if mode == 'C':
if (r < 0) or (r >= cols) or (c < 0) or (c >= cols):
return cval
else:
return image[r * cols + c]
else:
return image[coord_map(rows, r, mode) * cols +
coord_map(cols, c, mode)]
cdef int coord_map(int dim, int coord, char mode):
dim = dim - 1
if mode == 'M': # mirror
if (coord < 0):
return <int>(-coord % dim)
elif (coord > dim):
return <int>(dim - (coord % dim))
elif mode == 'W': # wrap
if (coord < 0):
return <int>(dim - (-coord % dim))
elif (coord > dim):
return <int>(coord % dim)
return coord
cdef tf(double x, double y, double* H, double *x_, double *y_):
cdef double xx, yy, zz
## print
## print H[0], H[1], H[2]
## print H[3], H[4], H[5]
## print H[6], H[7], H[8]
## print
xx = H[0] * x + H[1] * y + H[2]
yy = H[3] * x + H[4] * y + H[5]
zz = H[6] * x + H[7] * y + H[8]
xx = xx / zz
yy = yy / zz
x_[0] = xx
y_[0] = yy
@cython.boundscheck(False)
def homography(np.ndarray image, np.ndarray H, output_shape=None,
mode='constant', double cval=0):
"""
Projective transformation (homography).
Perform a projective transformation (homography) of a
floating point image, using bi-linear interpolation.
For each pixel, given its homogeneous coordinate :math:`\mathbf{x}
= [x, y, 1]^T`, its target position is calculated by multiplying
with the given matrix, :math:`H`, to give :math:`H \mathbf{x}`.
E.g., to rotate by theta degrees clockwise, the matrix should be
::
[[cos(theta) -sin(theta) 0]
[sin(theta) cos(theta) 0]
[0 0 1]]
or, to translate x by 10 and y by 20,
::
[[1 0 10]
[0 1 20]
[0 0 1 ]].
Parameters
----------
image : 2-D array
Input image.
H : array of shape ``(3, 3)``
Transformation matrix H that defines the homography.
output_shape : tuple (rows, cols)
Shape of the output image generated.
order : int
Order of splines used in interpolation.
mode : {'constant', 'mirror', 'wrap'}
How to handle values outside the image borders.
cval : string
Used in conjunction with mode 'C' (constant), the value
outside the image boundaries.
"""
cdef np.ndarray[dtype=np.double_t, ndim=2] img = image
cdef np.ndarray[dtype=np.double_t, ndim=2] M = \
np.ascontiguousarray(np.linalg.inv(H))
if mode not in ('constant', 'wrap', 'mirror'):
raise ValueError("Invalid mode specified. Please use "
"`constant`, `wrap` or `mirror`.")
if mode == 'constant':
mode_c = ord('C')
elif mode == 'wrap':
mode_c = ord('W')
elif mode == 'mirror':
mode_c = ord('M')
cdef int out_r, out_c, columns, rows
if output_shape is None:
out_r = img.shape[0]
out_c = img.shape[1]
else:
out_r = output_shape[0]
out_c = output_shape[1]
rows = img.shape[0]
columns = img.shape[1]
cdef np.ndarray[dtype=np.double_t, ndim=2] out = \
np.zeros((out_r, out_c), dtype=np.float64)
cdef int tfr, tfc, r_int, c_int
cdef double y0, y1, y2, y3
cdef double r, c, z, t, u
for tfr in range(out_r):
for tfc in range(out_c):
tf(tfc, tfr, <double*>M.data, &c, &r)
r_int = <int>floor(r)
c_int = <int>floor(c)
t = r - r_int
u = c - c_int
y0 = get_pixel(<double*>img.data, rows, columns,
r_int, c_int, mode_c)
y1 = get_pixel(<double*>img.data, rows, columns,
r_int + 1, c_int, mode_c)
y2 = get_pixel(<double*>img.data, rows, columns,
r_int + 1, c_int + 1, mode_c)
y3 = get_pixel(<double*>img.data, rows, columns,
r_int, c_int + 1, mode_c)
out[tfr, tfc] = \
(1 - t) * (1 - u) * y0 + \
t * (1 - u) * y1 + \
t * u * y2 + (1 - t) * u * y3;
return out