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scikit-image/skimage/transform/project.py
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2012-05-02 21:34:39 -07:00

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Python

"""Image projection.
"""
import numpy as np
from scipy.ndimage import interpolation as ndii
from ._warp import _stackcopy
__all__ = ['homography']
eps = np.finfo(float).eps
def homography(image, H, output_shape=None, order=1,
mode='constant', cval=0.):
"""Perform a projective transformation (homography) on an image.
For each pixel, given its homogeneous coordinate :math:`\mathbf{x}
= [x, y, 1]^T`, its target position is calculated by multiplying
with the given matrix, :math:`H`, to give :math:`H \mathbf{x}`.
E.g., to rotate by theta degrees clockwise, the matrix should be
::
[[cos(theta) -sin(theta) 0]
[sin(theta) cos(theta) 0]
[0 0 1]]
or, to translate x by 10 and y by 20,
::
[[1 0 10]
[0 1 20]
[0 0 1 ]].
Parameters
----------
image : 2-D array
Input image.
H : array of shape ``(3, 3)``
Transformation matrix H that defines the homography.
output_shape : tuple (rows, cols)
Shape of the output image generated.
order : int
Order of splines used in interpolation.
mode : string
How to handle values outside the image borders. Passed as-is
to ndimage.
cval : string
Used in conjunction with mode 'constant', the value outside
the image boundaries.
Examples
--------
>>> # rotate by 90 degrees around origin and shift down by 2
>>> x = np.arange(9, dtype=np.uint8).reshape((3, 3)) + 1
>>> x
array([[1, 2, 3],
[4, 5, 6],
[7, 8, 9]], dtype=uint8)
>>> theta = -np.pi/2
>>> M = np.array([[np.cos(theta),-np.sin(theta),0],
... [np.sin(theta), np.cos(theta),2],
... [0, 0, 1]])
>>> x90 = homography(x, M, order=1)
>>> x90
array([[3, 6, 9],
[2, 5, 8],
[1, 4, 7]], dtype=uint8)
>>> # translate right by 2 and down by 1
>>> y = np.zeros((5,5), dtype=np.uint8)
>>> y[1, 1] = 255
>>> y
array([[ 0, 0, 0, 0, 0],
[ 0, 255, 0, 0, 0],
[ 0, 0, 0, 0, 0],
[ 0, 0, 0, 0, 0],
[ 0, 0, 0, 0, 0]], dtype=uint8)
>>> M = np.array([[ 1., 0., 2.],
... [ 0., 1., 1.],
... [ 0., 0., 1.]])
>>> y21 = homography(y, M, order=1)
>>> y21
array([[ 0, 0, 0, 0, 0],
[ 0, 0, 0, 0, 0],
[ 0, 0, 0, 255, 0],
[ 0, 0, 0, 0, 0],
[ 0, 0, 0, 0, 0]], dtype=uint8)
"""
if image.ndim < 2:
raise ValueError("Input must have more than 1 dimension.")
image = np.atleast_3d(image)
ishape = np.array(image.shape)
bands = ishape[2]
if output_shape is None:
output_shape = ishape
coords = np.empty(np.r_[3, output_shape], dtype=float)
# TODO: Refactor this method to use transform.warp instead.
# Construct transformed coordinates
rows, cols = output_shape[:2]
rows, cols = np.mgrid[:rows, :cols]
tf_coords = np.empty(shape=cols.shape,
dtype=[('cols', float),
('rows', float),
('z', float)])
tf_coords['cols'], tf_coords['rows'] = cols, rows
tf_coords['z'] = 1
tf_coords = tf_coords.view((float, 3))
tf_coords = np.dot(tf_coords, np.linalg.inv(H).transpose())
tf_coords[np.absolute(tf_coords) < eps] = 0.
# normalize coordinates
tf_coords[..., :2] /= tf_coords[..., 2, np.newaxis]
# y-coordinate mapping
_stackcopy(coords[0,...], tf_coords[...,1])
# x-coordinate mapping
_stackcopy(coords[1,...], tf_coords[...,0])
# colour-coordinate mapping
coords[2,...] = range(bands)
# Prefilter not necessary for order 1 interpolation
prefilter = order > 1
mapped = ndii.map_coordinates(image, coords, prefilter=prefilter,
mode=mode, order=order, cval=cval)
return mapped.squeeze()