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Simple profiling through decorator functions. (counting and timing of functions decorated with @count and @timeIt that have a SimPEG.utils.Counter)
e.g. output: ‘’’ Counters: InexactGaussNewton.doEndIteration : 6 InexactGaussNewton.printIter : 7 InexactGaussNewton.scaleSearchDirection : 6 Times: mean sum InexactGaussNewton.findSearchDirection : 1.55e-02, 9.29e-02, 6x InexactGaussNewton.minimize : 1.10e-01, 1.10e-01, 1x InexactGaussNewton.modifySearchDirection: 2.89e-04, 1.73e-03, 6x InexactGaussNewton.projection : 3.69e-06, 1.11e-04, 30x InexactGaussNewton.stoppingCriteria : 1.16e-04, 1.51e-03, 13x Inversion.dataObj : 6.60e-05, 8.58e-04, 13x Inversion.dataObj2Deriv : 1.03e-04, 6.20e-03, 60x Inversion.dataObjDeriv : 5.06e-05, 3.54e-04, 7x Inversion.evalFunction : 7.75e-04, 1.01e-02, 13x Inversion.run : 1.10e-01, 1.10e-01, 1x Regularization.modelObj : 3.56e-04, 4.63e-03, 13x Regularization.modelObj2Deriv : 1.29e-03, 7.76e-02, 60x Regularization.modelObjDeriv : 5.01e-04, 3.51e-03, 7x ‘’’
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@@ -1,4 +1,4 @@
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from SimPEG.utils import sdiag
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from SimPEG.utils import sdiag, count, timeIt
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import numpy as np
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class Regularization(object):
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@@ -40,21 +40,20 @@ class Regularization(object):
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self._Wz = sdiag(a)*self.mesh.cellGradz
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return self._Wz
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alpha_s = 1e-6
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alpha_x = 1
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alpha_y = 1
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alpha_z = 1
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counter = None
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def __init__(self, mesh):
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self.mesh = mesh
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self._Wx = None
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self._Wy = None
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self._Wz = None
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self.alpha_s = 1e-6
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self.alpha_x = 1
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self.alpha_y = 1
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self.alpha_z = 1
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def pnorm(self, r):
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return 0.5*r.dot(r)
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@timeIt
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def modelObj(self, m):
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mresid = m - self.mref
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@@ -69,6 +68,7 @@ class Regularization(object):
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return mobj
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@timeIt
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def modelObjDeriv(self, m):
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"""
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@@ -104,6 +104,7 @@ class Regularization(object):
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return mobjDeriv
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@timeIt
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def modelObj2Deriv(self, m):
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mresid = m - self.mref
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