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SimPEG.MT Mergify.
Merge branch 'move2Simpeg' of https://github.com/simpeg/simpegmt into mt/dev Conflicts: .gitignore .travis.yml LICENSE docs/conf.py docs/index.rst requirements.txt setup.py
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import unittest
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import SimPEG as simpeg
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from SimPEG import MT
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from SimPEG.Utils import meshTensor
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import numpy as np
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# Define the tolerances
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TOLr = 5e-2
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TOLp = 5e-2
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def setupSurvey(sigmaHalf,tD=True):
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# Frequency
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nFreq = 33
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freqs = np.logspace(3,-3,nFreq)
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# Make the mesh
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ct = 5
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air = meshTensor([(ct,25,1.3)])
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# coreT0 = meshTensor([(ct,15,1.2)])
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# coreT1 = np.kron(meshTensor([(coreT0[-1],15,1.3)]),np.ones((7,)))
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core = np.concatenate( ( np.kron(meshTensor([(ct,15,-1.2)]),np.ones((10,))) , meshTensor([(ct,20)]) ) )
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bot = meshTensor([(core[0],15,-1.3)])
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x0 = -np.array([np.sum(np.concatenate((core,bot)))])
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m1d = simpeg.Mesh.TensorMesh([np.concatenate((bot,core,air))], x0=x0)
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# Make the model
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sigma = np.zeros(m1d.nC) + sigmaHalf
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sigma[m1d.gridCC > 0 ] = 1e-8
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sigmaBack = sigma.copy()
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# Add structure
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shallow = (m1d.gridCC < -200) * (m1d.gridCC > -600)
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deep = (m1d.gridCC < -3000) * (m1d.gridCC > -5000)
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sigma[shallow] = 1
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sigma[deep] = 0.1
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rxList = []
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for rxType in ['z1dr','z1di']:
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rxList.append(MT.Rx(simpeg.mkvc(np.array([0.0]),2).T,rxType))
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# Source list
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srcList =[]
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if tD:
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for freq in freqs:
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srcList.append(MT.SrcMT.polxy_1DhomotD(rxList,freq))
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else:
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for freq in freqs:
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srcList.append(MT.SrcMT.polxy_1Dprimary(rxList,freq))
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survey = MT.Survey(srcList)
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return survey, sigma, m1d
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def getAppResPhs(MTdata):
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# Make impedance
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def appResPhs(freq,z):
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app_res = ((1./(8e-7*np.pi**2))/freq)*np.abs(z)**2
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app_phs = np.arctan2(z.imag,z.real)*(180/np.pi)
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return app_res, app_phs
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zList = []
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for src in MTdata.survey.srcList:
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zc = [src.freq]
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for rx in src.rxList:
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if 'i' in rx.rxType:
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m=1j
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else:
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m = 1
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zc.append(m*MTdata[src,rx])
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zList.append(zc)
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return [appResPhs(zList[i][0],np.sum(zList[i][1:3])) for i in np.arange(len(zList))]
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def calculateAnalyticSolution(srcList,mesh,model):
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surveyAna = MT.Survey(srcList)
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data1D = MT.Data(surveyAna)
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for src in surveyAna.srcList:
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elev = src.rxList[0].locs[0]
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anaEd, anaEu, anaHd, anaHu = MT.Utils.MT1Danalytic.getEHfields(mesh,model,src.freq,elev)
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anaE = anaEd+anaEu
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anaH = anaHd+anaHu
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# Scale the solution
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# anaE = (anaEtemp/anaEtemp[-1])#.conj()
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# anaH = (anaHtemp/anaEtemp[-1])#.conj()
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anaZ = anaE/anaH
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for rx in src.rxList:
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data1D[src,rx] = getattr(anaZ, rx.projComp)
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return data1D
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def dataMis_AnalyticTotalDomain(sigmaHalf):
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# Make the survey
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# Total domain solution
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surveyTD, sigma, mesh = setupSurvey(sigmaHalf)
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problemTD = MT.Problem1D.eForm_TotalField(mesh)
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problemTD.pair(surveyTD)
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# Analytic data
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dataAnaObj = calculateAnalyticSolution(surveyTD.srcList,mesh,sigma)
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# dataTDObj = MT.DataMT.DataMT(surveyTD, surveyTD.dpred(sigma))
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dataTD = surveyTD.dpred(sigma)
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dataAna = simpeg.mkvc(dataAnaObj)
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return np.all((dataTD - dataAna)/dataAna < 2.)
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# surveyTD.dtrue = -simpeg.mkvc(dataAna,2)
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# surveyTD.dobs = -simpeg.mkvc(dataAna,2)
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# surveyTD.Wd = np.ones(surveyTD.dtrue.shape) #/(np.abs(surveyTD.dtrue)*0.01)
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# # Setup the data misfit
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# dmis = simpeg.DataMisfit.l2_DataMisfit(surveyTD)
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# dmis.Wd = surveyTD.Wd
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# return dmis.eval(sigma)
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def dataMis_AnalyticPrimarySecondary(sigmaHalf):
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# Make the survey
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# Primary secondary
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surveyPS, sigmaPS, mesh = setupSurvey(sigmaHalf,tD=False)
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problemPS = MT.Problem1D.eForm_psField(mesh)
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problemPS.sigmaPrimary = sigmaPS
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problemPS.pair(surveyPS)
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# Analytic data
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dataAnaObj = calculateAnalyticSolution(surveyPS.srcList,mesh,sigmaPS)
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dataPS = surveyPS.dpred(sigmaPS)
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dataAna = simpeg.mkvc(dataAnaObj)
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return np.all((dataPS - dataAna)/dataAna < 2.)
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class TestNumericVsAnalytics(unittest.TestCase):
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def setUp(self):
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pass
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# Total Fields
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# def test_appRes2en2(self):self.assertTrue(dataMis_AnalyticTotalDomain(2e-2))
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# Primary/secondary
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def test_appRes2en2_ps(self):self.assertTrue(dataMis_AnalyticPrimarySecondary(2e-2))
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if __name__ == '__main__':
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unittest.main()
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