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IndexCube now in Utils
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@@ -124,6 +124,83 @@ def volTetra(xyz, A, B, C, D):
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return V/6
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def indexCube(nodes, nN):
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"""
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Returns the index of nodes on the mesh.
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Input:
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nodes - string of which nodes to return. e.g. 'ABCD'
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nN - size of the nodal grid
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Output:
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index - index in the order asked e.g. 'ABCD' --> (A,B,C,D)
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TWO DIMENSIONS:
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node(i,j) node(i,j+1)
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A -------------- B
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| |
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| cell(i,j) |
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| I |
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| |
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D -------------- C
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node(i+1,j) node(i+1,j+1)
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THREE DIMENSIONS:
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node(i,j,k+1) node(i,j+1,k+1)
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E --------------- F
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/| / |
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/ | / |
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/ | / |
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node(i,j,k) node(i,j+1,k)
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A -------------- B |
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| H ----------|---- G
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| /cell(i,j) | /
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| / I | /
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| / | /
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D -------------- C
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node(i+1,j,k) node(i+1,j+1,k)
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@author Rowan Cockett
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Last modified on: 2013/03/07
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"""
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assert type(nodes) == str, "Nodes must be a str variable: e.g. 'ABCD'"
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assert type(nN) == np.ndarray, "Number of nodes must be an ndarray"
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nodes = nodes.upper()
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# Make sure that we choose from the possible nodes.
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possibleNodes = 'ABCD' if nN.size == 2 else 'ABCDEFGH'
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for node in nodes:
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assert node in possibleNodes, "Nodes must be chosen from: '%s'" % possibleNodes
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dim = nN.size
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nC = nN - 1
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if dim == 2:
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ij = ndgrid(np.arange(nC[0]), np.arange(nC[1]))
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i, j = ij[:, 0], ij[:, 1]
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elif dim == 3:
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ijk = ndgrid(np.arange(nC[0]), np.arange(nC[1]), np.arange(nC[2]))
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i, j, k = ijk[:, 0], ijk[:, 1], ijk[:, 2]
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else:
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raise Exception('Only 2 and 3 dimensions supported.')
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nodeMap = {'A': [0, 0, 0], 'B': [0, 1, 0], 'C': [1, 1, 0], 'D': [1, 0, 0],
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'E': [0, 0, 1], 'F': [0, 1, 1], 'G': [1, 1, 1], 'H': [1, 0, 1]}
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out = ()
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for node in nodes:
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shift = nodeMap[node]
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if dim == 2:
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out += (sub2ind(nN, np.c_[i+shift[0], j+shift[1]]).flatten(), )
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elif dim == 3:
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out += (sub2ind(nN, np.c_[i+shift[0], j+shift[1], k+shift[2]]).flatten(), )
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return out
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def getSubArray(A, ind):
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"""subArray"""
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return A[ind[0], :, :][:, ind[1], :][:, :, ind[2]]
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