623ff674ea
Added pymumps direct solver backend.
2013-11-21 15:00:51 -08:00
fff2375acd
Moved scipy direct code to own function.
2013-11-21 14:34:32 -08:00
82edbf7a60
Merge branch 'master' of https://bitbucket.org/rcockett/simpeg into richards
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Conflicts:
SimPEG/inverse/Optimize.py
SimPEG/regularization/Regularization.py
2013-11-21 11:56:12 -08:00
f87899465d
Merged in boundaryConditions (pull request #25 )
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Cell Gradient and Boundary Conditions
2013-11-21 10:42:43 -08:00
86982e86da
Merged in modelBuilder (pull request #26 )
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Create a random model
2013-11-21 10:42:00 -08:00
2782a6fcfb
Simple profiling through decorator functions. (counting and timing of functions decorated with @count and @timeIt that have a SimPEG.utils.Counter)
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e.g. output:
‘’’
Counters:
InexactGaussNewton.doEndIteration : 6
InexactGaussNewton.printIter : 7
InexactGaussNewton.scaleSearchDirection : 6
Times: mean sum
InexactGaussNewton.findSearchDirection : 1.55e-02, 9.29e-02, 6x
InexactGaussNewton.minimize : 1.10e-01, 1.10e-01, 1x
InexactGaussNewton.modifySearchDirection: 2.89e-04, 1.73e-03, 6x
InexactGaussNewton.projection : 3.69e-06, 1.11e-04, 30x
InexactGaussNewton.stoppingCriteria : 1.16e-04, 1.51e-03, 13x
Inversion.dataObj : 6.60e-05, 8.58e-04, 13x
Inversion.dataObj2Deriv : 1.03e-04, 6.20e-03, 60x
Inversion.dataObjDeriv : 5.06e-05, 3.54e-04, 7x
Inversion.evalFunction : 7.75e-04, 1.01e-02, 13x
Inversion.run : 1.10e-01, 1.10e-01, 1x
Regularization.modelObj : 3.56e-04, 4.63e-03, 13x
Regularization.modelObj2Deriv : 1.29e-03, 7.76e-02, 60x
Regularization.modelObjDeriv : 5.01e-04, 3.51e-03, 7x
‘’’
2013-11-20 21:59:53 -08:00
3015a78c32
Create a random model based on a convolution of a kernel and a random field. works in 1D 2D and 3D and has beautiful documentation.
2013-11-20 20:05:07 -08:00
b246b629a5
Merge branch 'BFGS' of https://bitbucket.org/rcockett/simpeg into richards
2013-11-19 17:46:48 -08:00
f71a6f8f06
Merge branch 'master' of https://bitbucket.org/rcockett/simpeg into richards
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Conflicts:
SimPEG/__init__.py
2013-11-19 17:46:02 -08:00
500844ccb5
Brought BFGS into Optimize. updated InexactGaussNewton to use BFGS as a preconditioner.
2013-11-19 17:41:51 -08:00
4472b39d6e
Iterative Solvers in SimPEG.Solver
2013-11-19 16:00:36 -08:00
b6ec17a4d3
Merge branch 'master' of https://bitbucket.org/rcockett/simpeg into boundaryConditions
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Conflicts:
SimPEG/__init__.py
2013-11-18 12:33:09 -08:00
a950ba8dd1
Bug fix in emSources. Beginning to change Cyl1DMesh to be more comparable with TensorMesh/BaseMesh.
2013-11-18 10:54:54 -08:00
cdf1dcf79f
Reorganized.
2013-11-14 15:48:32 -08:00
72e844c87d
Added a sub-module to utils to put analytics and source functions.
2013-11-14 11:53:14 -08:00
358411792d
Cleaned up averaging. Put it in an AveExtrap function.
2013-11-13 19:37:14 -08:00
5248ac81ce
Merge branch 'master' of https://bitbucket.org/rcockett/simpeg into seismicExample
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Conflicts:
docs/api_TestResults.rst
2013-11-12 13:43:06 -08:00
cea1141dcd
Bug fix for documentation.
2013-11-12 12:14:58 -08:00
130592a9e2
Bug fix to solver. and Documentation.
2013-11-12 11:34:49 -08:00
1f13a74bb9
Merge branch 'master' of https://bitbucket.org/rcockett/simpeg into BoundConstraint
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Conflicts:
.gitignore
SimPEG/utils/__init__.py
2013-11-12 11:24:40 -08:00
d3f38047e4
Multiple RHSs on solvers in Fortran. ~2x speed up on matlab implementation for a single RHS. for multiple RHS there are still some problems.
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Someone with some knowledge of how fortran works should look at this code.
Added a setup.py script that complies things. f2py should work on most computers, because it is included in the numpy distribution.
2013-11-12 10:36:20 -08:00
ea5dc21517
Fortran Solvers. Faster than Matlab!!
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Need to implement multiple RHSs.
2013-11-10 17:38:23 -08:00
19f79b3275
updates to Inversion. Bug Fixes.
2013-11-07 17:42:24 -08:00
0dc3b02c45
Combined stopping criteria and printers into a class, for easy reuse.
2013-11-07 16:02:22 -08:00
54d2f302b5
Refactored and moved duplicate code to utils.
2013-11-07 15:28:03 -08:00
1ef70ba15c
Moved projectedGradient to the optimize file. Added video to IPNB.
2013-11-07 14:56:54 -08:00
1427fe5cec
Able to add movies to the python notebook. using utils.animate(fig,animate,init)
2013-11-07 12:27:59 -08:00
abca84b954
Issue #25 renamed nF and nE to nFv nEv
2013-11-06 11:16:01 -08:00
5f75ac9d69
Issue #29 moved ave and ddx to utils.
2013-11-06 10:58:48 -08:00
9b00617e3f
Documentation updates.
2013-11-05 10:32:43 -08:00
51a539a291
Generalized to any dimension. Tested.
2013-11-04 18:17:01 -08:00
4784224a84
Put repetitive code in a function.
2013-11-04 16:35:11 -08:00
d063c2ccb8
Merge branch 'master' of https://bitbucket.org/rcockett/simpeg into Interpolation_TensorMesh
2013-11-04 16:26:18 -08:00
592490844d
Testing Functions for interpolation.
2013-11-04 16:05:16 -08:00
06cd641db3
Initial implementation of interpolation matrix generation for TensorMesh (3D ONLY)
2013-11-04 14:07:16 -08:00
f44a857669
Moved solver to utilities. But it is still available as SimPEG.Solver (as defined in the main __init__.py file)
2013-11-01 15:00:17 -07:00
db694dd780
moved to mesh folder.
2013-10-18 17:22:13 -07:00
65f129e7a8
Documented utilities.
2013-10-03 15:31:08 -07:00
d8c676015e
Fixes to ModelBuilder. Start of the DCProblem.
2013-10-02 15:24:51 -07:00
c0efb972a9
updated the notebook and minor bug fixes in utils
2013-08-30 22:23:14 -07:00
b66c63759d
Moved modelBuilder into utils added some documentation
2013-08-30 22:17:05 -07:00
3e21ba86a7
fixed typo in util's __init__.py
2013-08-12 17:04:15 -07:00
b0760f577f
Put utils in their own folder. Increases organization, and everything will be available under SimPEG.utils
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NOTE: if you add a new function (or file), you must register it in __init__.py for it to be available under:
e.g.
...
from utils import mkvc, …
...
from MYNEWFILE import MYNEWFUNCTION
2013-08-09 17:30:57 -07:00
Dave Marchant