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  • 6acc985b4d Merge pull request #39 from simpeg/develop Rowan Cockett 2013-11-27 10:33:56 -08:00
  • 9cca076651 Updated the example at the bottom of the vtkView. __name__ == __main__ Gudni Karl Rosenkjaer 2013-11-27 09:52:25 -08:00
  • 4cdafc12c1 Added a colorbar to the figure. Gudni Karl Rosenkjaer 2013-11-27 09:29:26 -08:00
  • 5fd4290927 Fixed errors. C,F,E works with limits, extent. Added .cmap for color mapping and .range to set the color range. Need to add colorbar, and more settings as it comes along. Gudni Karl Rosenkjaer 2013-11-27 09:11:02 -08:00
  • 6603fe77e1 First attempt on saving to a database, have written a very light wrapper on h5py. rowanc1 2013-11-26 21:35:03 -08:00
  • 1ec3c5cd09 Fixed vtkTools and vtkView to work for all cell,faces, edges. Gudni Karl Rosenkjaer 2013-11-26 21:07:30 -08:00
  • 9e96d58fab Test results output for rtfd.org and merging into master. rowanc1 2013-11-26 20:48:34 -08:00
  • a1c8002ea3 Merge branch 'develop' of https://github.com/simpeg/simpeg into develop rowanc1 2013-11-26 20:24:10 -08:00
  • 9eafec4895 Added options to the solver class that are dynamic based on your environment. If not available, they will fall back to ones that are. rowanc1 2013-11-26 20:23:40 -08:00
  • 8a185f713e Create README.md Rowan Cockett 2013-11-26 18:54:04 -08:00
  • 217c7421e8 wrong directory rowanc1 2013-11-26 18:41:25 -08:00
  • aea7386938 added to the startup file. rowanc1 2013-11-26 18:39:16 -08:00
  • b3c75d21a3 added matplotlib to the requirements rowanc1 2013-11-26 18:07:19 -08:00
  • 0a50249c9f try to get travis working. rowanc1 2013-11-26 18:03:18 -08:00
  • c099d1ce4e removed pypubsub rowanc1 2013-11-26 17:57:30 -08:00
  • c34e7bb035 typo yaml —> yml rowanc1 2013-11-26 17:54:11 -08:00
  • 86e8952327 Merge pull request #38 from simpeg/develop Rowan Cockett 2013-11-26 17:51:06 -08:00
  • 83bdf73a63 Added a travis.yaml file and moved requirements.txt for auto unit testing rowanc1 2013-11-26 17:50:03 -08:00
  • e2943ba56e Bug fix if no colorer is used in the video. rowanc1 2013-11-26 17:31:42 -08:00
  • a6e2686f09 Added doStartIteration to the code, set beta0 to None, and generate it in the evalFunction when fields are available. rowanc1 2013-11-26 17:30:43 -08:00
  • 1088c09864 Bug fix for integrating over the model, should have a volume term! rowanc1 2013-11-26 14:35:08 -08:00
  • 4b292b574d Updating vtkView Gudni UBC-Talva 2013-11-26 07:45:18 -08:00
  • b29cc6e08d Deleted local 'visulize' folder Gudni UBC-Talva 2013-11-25 17:44:26 -08:00
  • 6b15d373f8 Merge branch 'develop' into visulization Gudni UBC-Talva 2013-11-25 17:38:43 -08:00
  • 6a101483a9 Drasl Gudni UBC-Talva 2013-11-25 17:22:46 -08:00
  • 5b4270560c renamed video commands and added a more generic one. rowanc1 2013-11-25 16:51:48 -08:00
  • 623b14c05c face divergence operators for each direction. Bug fixes for boundary conditions. rowanc1 2013-11-25 15:02:11 -08:00
  • d81582cc50 Slice through a tensor mesh using a video. rowanc1 2013-11-25 15:01:12 -08:00
  • facd291bea Make tensor mesh copy the h and list so that the outside h is not affected. rowanc1 2013-11-25 14:59:52 -08:00
  • 4ca6f090f6 no message Rowan Cockett 2013-11-24 16:07:19 -08:00
  • 7ef3eb578f Merged in pyMumpsSolver (pull request #30) David Marchant 2013-11-22 17:39:27 -08:00
  • 4bd4c3cd81 bug fix, we were sourcing the wrong file. rowanc1 2013-11-23 00:45:19 +00:00
  • f5e3a4171d Raise an exception if name is not provided when hooking a lambda function. Dave Marchant 2013-11-22 16:11:43 -08:00
  • 1439052172 Multiple RHS using mumps backend. Dave Marchant 2013-11-22 15:39:06 -08:00
  • 82f5a5660f Documentation on how I am picking the initial beta. Rowan Cockett 2013-11-22 14:06:22 -08:00
  • aae725ff05 TimeSteppingInversion and Estimate Initial Beta based on eigenvalues comparison. Rowan Cockett 2013-11-22 13:39:26 -08:00
  • c41b9f12e9 Documentation updates to optimize. Updated the hook method. Rowan Cockett 2013-11-22 11:58:31 -08:00
  • c5daa985d3 Merge branch 'develop' of https://bitbucket.org/rcockett/simpeg into develop Rowan Cockett 2013-11-22 10:51:35 -08:00
  • 6216ae977e Added hook method to utils so that we can hook new methods dynamically into the classes. Rowan Cockett 2013-11-22 10:51:01 -08:00
  • 6c029e5e2c Added matplotlib into the startup. SimPEG needs it. rowanc1 2013-11-22 01:26:22 +00:00
  • 66050f474f Changed to generic bitbucket git repo. rowanc1 2013-11-22 01:17:06 +00:00
  • d46a2aaf87 Merged in GCEtools (pull request #29) rowanc1 2013-11-21 17:13:02 -08:00
  • dbaea1fda9 callHooks generalizes some of the hook calling code in Optimize and Inversion Rowan Cockett 2013-11-21 16:56:01 -08:00
  • 0bd971c22f Removed PubSub based communication. Rowan Cockett 2013-11-21 15:12:28 -08:00
  • 623ff674ea Added pymumps direct solver backend. Dave Marchant 2013-11-21 15:00:51 -08:00
  • fff2375acd Moved scipy direct code to own function. Dave Marchant 2013-11-21 14:34:32 -08:00
  • 5f64ea8399 Documentation Updates. Rowan Cockett 2013-11-21 12:25:56 -08:00
  • 545b1637d8 Merged in updateFramework (pull request #28) rowanc1 2013-11-21 12:08:31 -08:00
  • ef45abddbb Test results and bug fix. Rowan Cockett 2013-11-21 12:03:25 -08:00
  • 82edbf7a60 Merge branch 'master' of https://bitbucket.org/rcockett/simpeg into richards Rowan Cockett 2013-11-21 11:56:12 -08:00
  • 95fd98c23e Remove Richards problem from SimPEG. This will be held in a different repo. Rowan Cockett 2013-11-21 11:52:41 -08:00
  • f87899465d Merged in boundaryConditions (pull request #25) rowanc1 2013-11-21 10:42:43 -08:00
  • 86982e86da Merged in modelBuilder (pull request #26) rowanc1 2013-11-21 10:42:00 -08:00
  • 7e96a7a4ca Merged in counters (pull request #27) rowanc1 2013-11-21 10:41:16 -08:00
  • 594bf20d5f Updated startup script. Dave Marchant 2013-11-21 10:15:30 -08:00
  • a595893f88 Simple startup script to install necessary software on google compute engine. Dave Marchant 2013-11-20 22:46:38 -08:00
  • 2782a6fcfb Simple profiling through decorator functions. (counting and timing of functions decorated with @count and @timeIt that have a SimPEG.utils.Counter) Rowan Cockett 2013-11-20 21:59:53 -08:00
  • 3015a78c32 Create a random model based on a convolution of a kernel and a random field. works in 1D 2D and 3D and has beautiful documentation. Rowan Cockett 2013-11-20 20:05:07 -08:00
  • 808036ddc8 Bug fixes in optimization. Rowan Cockett 2013-11-20 19:37:48 -08:00
  • 1c895f397d Set Mref in inversion. Rowan Cockett 2013-11-20 19:37:09 -08:00
  • 0afe42aa34 Bug fix in timeStep (must return something, not an error.) Minor updates to Optimize and Inversion. Rowan Cockett 2013-11-19 17:49:18 -08:00
  • b246b629a5 Merge branch 'BFGS' of https://bitbucket.org/rcockett/simpeg into richards Rowan Cockett 2013-11-19 17:46:48 -08:00
  • f71a6f8f06 Merge branch 'master' of https://bitbucket.org/rcockett/simpeg into richards Rowan Cockett 2013-11-19 17:46:02 -08:00
  • 500844ccb5 Brought BFGS into Optimize. updated InexactGaussNewton to use BFGS as a preconditioner. Rowan Cockett 2013-11-19 17:41:51 -08:00
  • 4472b39d6e Iterative Solvers in SimPEG.Solver Rowan Cockett 2013-11-19 16:00:36 -08:00
  • fc435feb9e BFGS implementation in the notebook. Rowan Cockett 2013-11-19 15:59:37 -08:00
  • 514b709270 Added nNv property to baseMesh. Dave Marchant 2013-11-19 12:27:08 -08:00
  • b6ec17a4d3 Merge branch 'master' of https://bitbucket.org/rcockett/simpeg into boundaryConditions Rowan Cockett 2013-11-18 12:33:09 -08:00
  • 1f3799caa0 Added try/catch on the vtk import for the documentation. Added small example at bottom of vtkView. Rowan Cockett 2013-11-18 12:19:56 -08:00
  • c107376c31 Merged in visulization (pull request #24) rowanc1 2013-11-18 12:05:08 -08:00
  • 3bf16fd2a7 Merge branch 'master' of https://bitbucket.org/rcockett/simpeg into visulization Rowan Cockett 2013-11-18 12:03:19 -08:00
  • a2c305e6bc Renamed module. Rowan Cockett 2013-11-18 11:56:35 -08:00
  • 7d295dc57e Fix in example notebook. Dave Marchant 2013-11-18 11:24:27 -08:00
  • 8992f195a4 Added nCv property to BaseMesh and Cyl1DMesh classes. Dave Marchant 2013-11-18 11:06:35 -08:00
  • a950ba8dd1 Bug fix in emSources. Beginning to change Cyl1DMesh to be more comparable with TensorMesh/BaseMesh. Dave Marchant 2013-11-18 10:54:54 -08:00
  • 37bcf891be Fixed interface so the renderer uses Trackball interaction, extent and limits work. Gudni Karl Rosenkjaer 2013-11-17 14:31:44 -08:00
  • 2a770f6fd4 Updated nF and nE Gudni Karl Rosenkjaer 2013-11-15 16:18:50 -08:00
  • 1a14ed3b04 Merge branch 'origin/master' Gudni Karl Rosenkjaer 2013-11-15 16:14:25 -08:00
  • 278eec94ec Ensure that (1/dt) gives a float not an int. Use (1.0/dt). Added fullJ calculation. Tested Sensitivity. Rowan Cockett 2013-11-15 13:59:41 -08:00
  • e98e41f34c dpred Rowan Cockett 2013-11-15 10:10:10 -08:00
  • c6be547121 Add vtkView.viewProp to indicate which model to view at any given time. No check wether the name or number exists as an array in the vtkView._vtkobj. Gudni Karl Rosenkjaer 2013-11-15 09:42:06 -08:00
  • 0cafa56104 Fixed code so that vtkView works for cell, edge and face. extent and limits work for the rendering as well. Gudni Karl Rosenkjaer 2013-11-15 08:50:29 -08:00
  • 7663d12707 Removed Synthetic Problem class, and added method to Problem. Rowan Cockett 2013-11-14 18:28:28 -08:00
  • bc49c6058f Bug Fixes and Adjoint Test. Rowan Cockett 2013-11-14 18:01:53 -08:00
  • 8f4e1174c8 Added J and Jt, untested as of yet. Rowan Cockett 2013-11-14 15:53:19 -08:00
  • 60405fafe9 Merged in GeophysicsUtils (pull request #23) David Marchant 2013-11-14 15:49:38 -08:00
  • cdf1dcf79f Reorganized. Dave Marchant 2013-11-14 15:48:32 -08:00
  • 61e175cd12 Fields calculation in Richards. Calculation of the diagonals of the Jacobian. Rowan Cockett 2013-11-14 15:29:25 -08:00
  • a5032e07b1 Minor updates to Utils documentation. Rowan Cockett 2013-11-14 12:08:02 -08:00
  • 72e844c87d Added a sub-module to utils to put analytics and source functions. Dave Marchant 2013-11-14 11:53:14 -08:00
  • 1e5969ec6a getResidual for Richards equation working. Rowan Cockett 2013-11-14 11:31:02 -08:00
  • 81dea1a5dd Added NewtonRoot finding algorithm. Rowan Cockett 2013-11-14 11:26:55 -08:00
  • d7c8e72379 Added examples directory. Dave Marchant 2013-11-14 10:50:33 -08:00
  • cd8463ee3d Merge branch 'boundaryConditions' of https://bitbucket.org/rcockett/simpeg into richards Rowan Cockett 2013-11-13 23:25:53 -08:00
  • c6c0d3db4f Bug fix in cellGradx/y/z Rowan Cockett 2013-11-13 23:00:51 -08:00
  • dc07ea02fd Make BC work in 2D and 3D Rowan Cockett 2013-11-13 19:44:27 -08:00
  • 358411792d Cleaned up averaging. Put it in an AveExtrap function. Rowan Cockett 2013-11-13 19:37:14 -08:00
  • 52c9cf83c9 Tests on Cell Grad (bug fixes for non-uniform mesh). and aveCC2F with extrapolation. Rowan Cockett 2013-11-13 19:34:11 -08:00
  • 6fbe3a616b Added shortcut to making a TensorMesh on a unit cube: Rowan Cockett 2013-11-13 15:52:56 -08:00
  • 4c82ce7dc2 Documentation for cellGradient. Boundary Conditions. Testing in 2D & 3D. Rowan Cockett 2013-11-13 15:14:33 -08:00