from scipy.sparse import linalg from scipy import sparse from sputils import * from utils import * from sputils import * from numpy import * from getEdgeTangent import * from inv3X3BlockDiagonal import * def volTetra(y,m,I,A,B,C,D): a11 = array(y[A,0]-y[B,0]); a12 = array(y[A,0]-y[C,0]); a13 = array(y[A,0]-y[D,0]) a21 = array(y[A,1]-y[B,1]); a22 = array(y[A,1]-y[C,1]); a23 = array(y[A,1]-y[D,1]) a31 = array(y[A,2]-y[B,2]); a32 = array(y[A,2]-y[C,2]); a33 = array(y[A,2]-y[D,2]) return abs(a11*a22*a33 + a12*a23*a31 + a13*a21*a32 - a31*a22*a13 - a32*a23*a11 - a33*a21*a12) def getCellVolume(X,Y,Z): m = array(shape(X))-1 y = hstack3(mkvc(X),mkvc(Y),mkvc(Z)) i = int64(linspace(0,m[0]-1,m[0])) j = int64(linspace(0,m[1]-1,m[1])) k = int64(linspace(0,m[2]-1,m[2])) ii,jj,kk = ndgrid(i,j,k) ii = mkvc(ii); jj = mkvc(jj); kk = mkvc(kk) I = int64(sub2ind(m,hstack3(ii,jj,kk))) A = int64(sub2ind(m+1,hstack3(ii,jj,kk))) B = int64(sub2ind(m+1,hstack3(ii,jj+1,kk))) C = int64(sub2ind(m+1,hstack3(ii+1,jj+1,kk))) D = int64(sub2ind(m+1,hstack3(ii+1,jj,kk))) E = int64(sub2ind(m+1,hstack3(ii,jj,kk+1))) F = int64(sub2ind(m+1,hstack3(ii,jj+1,kk+1))) G = int64(sub2ind(m+1,hstack3(ii+1,jj+1,kk+1))) H = int64(sub2ind(m+1,hstack3(ii+1,jj,kk+1))) v1 = volTetra(y,m,I,A,B,D,E) v2 = volTetra(y,m,I,B,E,F,G) v3 = volTetra(y,m,I,B,D,E,G) v4 = volTetra(y,m,I,B,C,D,G) v5 = volTetra(y,m,I,D,E,G,H) v = 1.0/6.0 * ( v1 + v2 + v3 + v4 + v5 ) return v.flatten() if __name__ == '__main__': X,Y,Z = ndgrid(linspace(0,2,3),linspace(0,2,3),linspace(0,2,3)) Z[2,2,2] = 2.5; Z[0,0,0] = -0.5 X[2,2,2] = 2.5; X[0,0,0] = -0.5 v = getCellVolume(X,Y,Z)