from SimPEG import * import simpegPF as PF import pylab as plt import os driver = PF.MagneticsIO.MagneticsDriver_Inv('PYMAG3D_inv.inp') mesh = driver.mesh survey = driver.survey rxLoc = survey.srcField.rxList[0].locs d = survey.dobs wd = survey.std ndata = survey.srcField.rxList[0].locs.shape[0] beta_in = 1e+5 eps_p = 1e-4 eps_q = 1e-4 actv = driver.activeCells nC = len(actv) # Create active map to go from reduce set to full actvMap = Maps.InjectActiveCells(mesh, actv, -100) # Creat reduced identity map idenMap = Maps.IdentityMap(nP = nC) # Load starting model file mstart = driver.m0 # Load reference file mref = driver.mref # Get magnetization vector for MOF M_xyz = driver.magnetizationModel # Get index of the center midx = int(mesh.nCx/2) midy = int(mesh.nCy/2) # Get distance weighting function #============================================================================== # wr = PF.Magnetics.get_dist_wgt(mesh,rxLoc,actv,3.,np.min(mesh.hx)/4) # #wrMap = PF.BaseMag.WeightMap(nC, wr) #============================================================================== #%% Plot obs data PF.Magnetics.plot_obs_2D(rxLoc,d,'Observed Data') #%% Run inversion prob = PF.Magnetics.MagneticIntegral(mesh, mapping=idenMap, actInd=actv) prob.solverOpts['accuracyTol'] = 1e-4 survey.pair(prob) #survey.makeSyntheticData(data, std=0.01) #survey.dobs=d #survey.mtrue = model # Write out the predicted pred = prob.fields(mstart) PF.Magnetics.writeUBCobs('Pred.dat', survey, pred) wr = np.sum(prob.G**2.,axis=0)**0.5 / mesh.vol[actv] wr = ( wr/np.max(wr) ) wr_out = actvMap * wr plt.figure() ax = plt.subplot() mesh.plotSlice(wr_out, ax=ax, normal='Y', ind=midx ,clim=(-1e-3, wr.max())) plt.title('Distance weighting') plt.xlabel('x');plt.ylabel('z') plt.gca().set_aspect('equal', adjustable='box') reg = Regularization.Simple(mesh, indActive=actv, mapping=idenMap) reg.mref = mref reg.wght = wr #reg.alpha_s = 1. # Create pre-conditioner diagA = np.sum(prob.G**2.,axis=0) + beta_in*(reg.W.T*reg.W).diagonal() PC = Utils.sdiag(diagA**-1.) dmis = DataMisfit.l2_DataMisfit(survey) dmis.Wd = 1/wd opt = Optimization.ProjectedGNCG(maxIter=10,lower=0.,upper=1., maxIterCG= 20, tolCG=1e-3) opt.approxHinv = PC # opt = Optimization.InexactGaussNewton(maxIter=6) invProb = InvProblem.BaseInvProblem(dmis, reg, opt, beta=beta_in) beta = Directives.BetaSchedule(coolingFactor=2, coolingRate=1) #betaest = Directives.BetaEstimate_ByEig() target = Directives.TargetMisfit() inv = Inversion.BaseInversion(invProb, directiveList=[beta,target]) m0 = mstart # Run inversion mrec = inv.run(m0) m_out = actvMap*mrec # Write result Mesh.TensorMesh.writeModelUBC(mesh,'SimPEG_inv_l2l2.sus',m_out) #Utils.meshutils.writeUBCTensorModel(home_dir+dsep+'wr.dat',mesh,wr_out) # Plot predicted pred = prob.fields(mrec) #PF.Magnetics.plot_obs_2D(rxLoc,pred,wd,'Predicted Data') #PF.Magnetics.plot_obs_2D(rxLoc,(d-pred),wd,'Residual Data') print "Final misfit:" + str(np.sum( ((d-pred)/wd)**2. ) ) #%% Plot out a section of the model yslice = midx m_out[m_out==-100] = np.nan plt.figure() ax = plt.subplot(221) mesh.plotSlice(m_out, ax = ax, normal = 'Z', ind=-5, clim = (mrec.min(), mrec.max())) plt.plot(np.array([mesh.vectorCCx[0],mesh.vectorCCx[-1]]), np.array([mesh.vectorCCy[yslice],mesh.vectorCCy[yslice]]),c='w',linestyle = '--') plt.title('Z: ' + str(mesh.vectorCCz[-5]) + ' m') plt.xlabel('x');plt.ylabel('z') plt.gca().set_aspect('equal', adjustable='box') ax = plt.subplot(222) mesh.plotSlice(m_out, ax = ax, normal = 'Z', ind=-8, clim = (mrec.min(), mrec.max())) plt.plot(np.array([mesh.vectorCCx[0],mesh.vectorCCx[-1]]), np.array([mesh.vectorCCy[yslice],mesh.vectorCCy[yslice]]),c='w',linestyle = '--') plt.title('Z: ' + str(mesh.vectorCCz[-8]) + ' m') plt.xlabel('x');plt.ylabel('z') plt.gca().set_aspect('equal', adjustable='box') ax = plt.subplot(212) mesh.plotSlice(m_out, ax = ax, normal = 'Y', ind=yslice, clim = (mrec.min(), mrec.max())) plt.title('Cross Section') plt.xlabel('x');plt.ylabel('z') plt.gca().set_aspect('equal', adjustable='box') #%% Run one more round for sparsity phim = invProb.phi_m_last phid = invProb.phi_d reg = Regularization.Sparse(mesh, indActive = actv, mapping = idenMap) reg.recModel = mrec reg.mref = mref reg.wght = wr reg.eps_p = eps_p reg.eps_q = eps_q reg.norms = driver.lpnorms diagA = np.sum(prob.G**2.,axis=0) + beta_in*(reg.W.T*reg.W).diagonal() PC = Utils.sdiag(diagA**-1.) #reg.alpha_s = 1. dmis = DataMisfit.l2_DataMisfit(survey) dmis.Wd = wd opt = Optimization.ProjectedGNCG(maxIter=20 ,lower=0.,upper=1., maxIterCG= 10, tolCG = 1e-4) opt.approxHinv = PC #opt.phim_last = reg.eval(mrec) # opt = Optimization.InexactGaussNewton(maxIter=6) invProb = InvProblem.BaseInvProblem(dmis, reg, opt, beta = invProb.beta) beta = Directives.BetaSchedule(coolingFactor=1, coolingRate=1) update_beta = Directives.Scale_Beta(tol = 0.05) #betaest = Directives.BetaEstimate_ByEig() target = Directives.TargetMisfit() IRLS =Directives.Update_IRLS( phi_m_last = phim, phi_d_last = phid ) inv = Inversion.BaseInversion(invProb, directiveList=[beta,IRLS,update_beta]) m0 = mrec # Run inversion mrec = inv.run(m0) m_out = actvMap*mrec Mesh.TensorMesh.writeModelUBC(mesh,'SimPEG_inv_l0l2.sus',m_out) pred = prob.fields(mrec) #%% Plot obs data PF.Magnetics.plot_obs_2D(rxLoc,pred,'Predicted Data') PF.Magnetics.plot_obs_2D(rxLoc,d,'Observed Data') print "Final misfit:" + str(np.sum( ((d-pred)/wd)**2. ) ) #%% Plot out a section of the model yslice = midx m_out[m_out==-100] = np.nan plt.figure() ax = plt.subplot(221) mesh.plotSlice(m_out, ax = ax, normal = 'Z', ind=-5, clim = (mrec.min(), mrec.max())) plt.plot(np.array([mesh.vectorCCx[0],mesh.vectorCCx[-1]]), np.array([mesh.vectorCCy[yslice],mesh.vectorCCy[yslice]]),c='w',linestyle = '--') plt.title('Z: ' + str(mesh.vectorCCz[-5]) + ' m') plt.xlabel('x');plt.ylabel('z') plt.gca().set_aspect('equal', adjustable='box') ax = plt.subplot(222) mesh.plotSlice(m_out, ax = ax, normal = 'Z', ind=-8, clim = (mrec.min(), mrec.max())) plt.plot(np.array([mesh.vectorCCx[0],mesh.vectorCCx[-1]]), np.array([mesh.vectorCCy[yslice],mesh.vectorCCy[yslice]]),c='w',linestyle = '--') plt.title('Z: ' + str(mesh.vectorCCz[-8]) + ' m') plt.xlabel('x');plt.ylabel('z') plt.gca().set_aspect('equal', adjustable='box') ax = plt.subplot(212) mesh.plotSlice(m_out, ax = ax, normal = 'Y', ind=yslice, clim = (mrec.min(), mrec.max())) plt.title('Cross Section') plt.xlabel('x');plt.ylabel('z') plt.gca().set_aspect('equal', adjustable='box') plt.show()