mirror of
https://github.com/wassname/simpeg.git
synced 2026-06-28 03:51:17 +08:00
rowanc1
146 lines
3.5 KiB
Bash
Executable File
146 lines
3.5 KiB
Bash
Executable File
#! /bin/bash
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locale-gen en_US en_US.UTF-8 hu_HU hu_HU.UTF-8 > output.t
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dpkg-reconfigure locales >> output.t
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sudo apt-get update >> output.t
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echo " "
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echo " "
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echo " ============================================"
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echo " | Installing packages form package manager |"
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echo " ============================================"
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echo " "
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echo " "
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sudo apt-get -y install aptitude >> output.t
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packages=(gcc gfortran git libopenmpi-dev python-pip python-dev git flex bison cmake vim cython ipython python-scipy python-numpy python-nose python-pip python-matplotlib python-vtk python-h5py libmumps-ptscotch-4.10.0 libmumps-ptscotch-dev libblas-dev liblapack-dev )
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for item in ${packages[*]}
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do
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printf " %-30s\n" $item
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done
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for item in ${packages[*]}
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do
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tput cuu1
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done
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for item in ${packages[*]}
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do
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sudo aptitude -y install $item >> output.t
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printf " %-30s %-4s\n" $item done
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done
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echo " "
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echo " "
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echo " ====================================="
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echo " | Installing extra Python libraries |"
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echo " ====================================="
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echo " "
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echo " "
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pipPackages=(mpi4py pymumps)
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for item in ${pipPackages[*]}
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do
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printf " %-30s\n" $item
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done
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for item in ${pipPackages[*]}
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do
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tput cuu1
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done
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for item in ${pipPackages[*]}
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do
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sudo pip install $item >> output.t
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printf " %-30s %-4s\n" $item done
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done
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Upgrade=(scipy numpy ipython)
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for item in ${Upgrade[*]}
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do
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printf " %-8s%-7s\n" $item upgrade
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done
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for item in ${Upgrade[*]}
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do
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tput cuu1
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done
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for item in ${Upgrade[*]}
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do
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sudo pip install $item --upgrade >> output.t
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printf " %-8s%-7s %-4s\n" $item upgrade done
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done
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echo " "
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echo " "
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echo " ====================="
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echo " | Installing SimPEG |"
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echo " ====================="
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echo " "
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echo " "
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cd ~
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git clone https://github.com/simpeg/simpeg.git >> output.t
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cd simpeg/SimPEG/
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python setup.py >> output.t
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cd ~
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mkdir petsc
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cd petsc
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echo " "
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echo " "
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echo " ===================="
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echo " | Installing PETSc |"
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echo " ===================="
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echo " "
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echo " "
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wget http://ftp.mcs.anl.gov/pub/petsc/release-snapshots/petsc-3.4.3.tar.gz
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tar -zxf petsc-3.4.3.tar.gz
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cd petsc-3.4.3
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./configure --with-debugging=no --dowload-mpich=yes --download-blacs=yes --download-f-blas-lapack=yes --download-scalapack=yes --download-mumps=yes --download-ml=yes --download-spooles=yes --download-hypre=yes --dowload-trilinos=yes --download-metis=yes --download-parmetis=yes --download-umfpack=yes --download-ptscotch=yes --download-superlu=yes --download-superlu_dist=yes --download-essl=yes --download-eucild=yes --download-spai=yes --download-mpi4py=yes --download-petsc4py=yes --download-scientificpython=yes
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echo "export PETSC_DIR=/home/${USER}/petsc/petsc-3.4.3" >> ~/.bashrc
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echo "export PETSC_ARCH=arch-linux2-c-opt" >> ~/.bashrc
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export PETSC_DIR=/home/${USER}/petsc/petsc-3.4.3
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export PETSC_ARCH=arch-linux2-c-opt
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. ~/.bashrc
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make PETSC_DIR=/home/${USER}/petsc/petsc-3.4.3 PETSC_ARCH=arch-linux2-c-opt all
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make PETSC_DIR=/home/${USER}/petsc/petsc-3.4.3 PETSC_ARCH=arch-linux2-c-opt test
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cd ~/petsc
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echo " "
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echo " "
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echo " ======================="
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echo " | Installing PETSc4PY |"
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echo " ======================="
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echo " "
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echo " "
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git clone https://bitbucket.org/petsc/petsc4py.git
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cd petsc4py/
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python setup.py build >> output.t
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python setup.py install --prefix=~/petsc >> output.t
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echo "export PYTHONPATH=~/petsc/lib/python2.7/site-packages:/home/$USER/simpeg:${PYTHONPATH}" >> ~/.bashrc
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cd ~
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source ~/.bashrc
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